Determining habitat limitations of Maumee River walleye production to western Lake Erie fish stocks: documenting a spawning ground barrier

Tributaries provide spawning habitat for three of four major sub-stocks of Lake Erie walleye (Sander vitreus). Despite anthropogenic degradation and the extirpation of other potamodromous species, the Maumee River, Ohio, USA continues to support one of the largest fish migrations in the Laurentian Great Lakes. To determine if spawning habitat availability and quality could limit production of Maumee River walleye, two habitat suitability models were created for the lower 51 km of the Maumee River and the distribution and numbers of walleye eggs deposited in a 25 km stretch of river were assessed. Walleye eggs were collected using a diaphragm pump at 7 and 10 sites from March/April to May 2014 and 2015. The habitat suitability models showed that <3% of the river yielded ‘good’ walleye spawning habitat and 11–38% yielded ‘moderate’ walleye spawning habitat, depending on the model. However, a large set of rapids at river kilometer 28 and more than five river kilometers of less suitable habitat separated areas of ‘good’ habitat. The rapids may present a migratory barrier for many spawning walleye, as modeled water velocities exceed maximum estimated walleye swim speeds 71–100% of days during pre-spawn migration and spawning during the study period. In both study years, there was a sharp decline in mean egg numbers from spawning sites downstream of the rapids (439.7 eggs/2 min tow ± 990.6 SD) to upstream sites (5.9 eggs/2 min tow ± 19.4 SD). Physical barriers like rapids may reduce spawning habitat connectivity and could limit walleye production in the Maumee River.     

Status of the major aquaculture carps of China in the Laurentian Great Lakes Basin

There is concern of economic and environmental damage occuring if any of the four major aquacultured carp species of China, black carp Mylopharyngodon piceus, bighead carp Hypophthalmichthys nobilis, silver carp H. molitrix, or grass carp Ctenopharyngodon idella, were to establish in the Laurentian Great Lakes. All four are reproducing in the Mississippi River Basin. We review the status of these fishes in relation to the Great Lakes and their proximity to pathways into the Great Lakes, based on captures and collections of eggs and larvae. No black carp have been captured in the Great Lakes Basin. One silver carp and one bighead carp were captured within the Chicago Area Waterway System, on the Great Lakes side of electric barriers designed to keep carp from entering the Great Lakes from the greater Mississippi River Basin. Three bighead carp were captured in Lake Erie, none later than the year 2000. By December 2019, at least 650 grass carps had been captured in the Great Lakes Basin, most in western Lake Erie, but none in Lake Superior. Grass carp reproduction has been documented in the Sandusky and Maumee rivers in Ohio, tributaries of Lake Erie. We also discuss environmental DNA (eDNA) results as an early detection and monitoring tool for bighead and silver carps. Detection of eDNA does not necessarily indicate presence of live fish, but bigheaded carp eDNA has been detected on the Great Lakes side of the barriers and in a small proportion of samples from the western basin of Lake Erie.     

Sustainable Groundwater Allocation in the Great Lakes Basin

Outdated groundwater allocation policies have resulted in unrestrained abstraction of groundwater in the Great Lakes Basin. Continuing on this course will lead to more frequent conflicts and further degradation of the Basin's ecosystem. Alternative approaches must focus on achieving sustainable groundwater allocation. The authors present two alternative institutions, local collaborative planning for groundwater allocation, and a regional watershed board. Collaborative institutions responsible for local groundwater planning should be established according to practical geographical units, have access to sound scientific information, utilize adaptive management and engage in open deliberation. The regional watershed board should establish a comprehensive and unified inventory of all groundwater resources in the Basin, designate critical groundwater areas, monitor groundwater management by respective jurisdictions, and make recommendations on best practices.     

Great Lakes coastal wetlands as suitable habitat for invasive mute swans in Michigan

Great Lakes coastal wetlands provide critical habitat and food resources for more species than any other Great Lakes ecosystem. Due to past and current anthropogenic disturbances, coastal wetland area has been reduced by >50% while remaining habitat is frequently degraded. Invasive mute swans have contributed to the degradation of coastal wetlands by removing submergent vegetation and competitively excluding native species from breeding areas and food resources. Despite current control practices, mute swan population estimates in Michigan are ~8000, comparable to population estimates in the entire Atlantic Flyway of North America. We collected local abiotic data and adjacent land cover data at 3 scales from 51 sites during 2010 and 2011 and conducted 2 mute swan detection surveys each year during the summer and fall. We developed a single-species, single-season occupancy-based habitat suitability model to determine current and potential mute swan habitat among Great Lakes coastal wetlands. We found mute swans occupied heterotrophic coastal wetlands adjacent to urban areas, which were high in ammonium and oxidation-reduction potential and low in nitrates, dissolved oxygen, and turbidity. Our model provides managers with a valuable tool for rapidly identifying mute swan habitat areas for control efforts, particularly the need for targeting mute swan populations in or near urbanized areas. Our model will also aid managers in monitoring areas that mute swans may invade and prioritizing coastal wetland areas for restoration efforts.     

Characteristics of double-crested cormorant colonies in the U.S. Great Lakes island landscape

The Great Lakes form the largest freshwater island system in the world and provide breeding habitat for a large proportion of the continental population of double-crested cormorants (Phalacrocorax auritus). Here, cormorants have a high profile due to conflicts with humans; by 2007, most active (64%) breeding sites in U.S. waters were managed. This study used data from the U.S. Great Lakes Colonial Waterbird Database and The Nature Conservancy's Great Lakes Island GIS database to identify important features of breeding sites in the U.S. Great Lakes and broaden understanding of cormorant presence at the island-landscape scale. Islands 0.5–10 ha were used more frequently than expected, and most sites had remoteness values of ≤ 3 km. Colony size was positively correlated with years occupied and large colonies (> 1000 pairs) developed primarily (95%) on island sites > 1.0 ha. Sites supporting large colonies were more remote than those supporting smaller colonies. Presence of other colonial waterbird species, especially Herring Gulls (Larus argentatus), also characterized cormorant sites. Islands used by cormorants comprised a small proportion (n = 90, 3%) of the U.S. Great Lakes island resource, and < 1% of the total island area. Certain characteristics of breeding sites (e.g., small islands, proximity to mainland) may increase negative attitudes about cormorants. To understand cormorant impacts to island resources (e.g., vegetation; other colonial waterbird species), we suggest cormorant presence in the Great Lakes be considered in the broader context of island science, conservation and known threats, and at a landscape scale.     

Seasonal patterns in hydrochemical mixing in three Great Lakes rivermouth ecosystems

Rivermouth ecosystems in the Laurentian Great Lakes represent complex hydrologic mixing zones where lake and river water combine to form biologically productive areas that are functionally similar to marine estuaries. As urban, industrial, shipping, and recreational centers, rivermouths are the focus of human interactions with the Great Lakes and, likewise, may represent critical habitat for larval fish and other biota. The hydrology and related geomorphology in these deltaic systems form the basis for ecosystem processes and wetland habitat structure but are poorly understood. To this end, we examined hydrogeomorphic structure and lake-tributary mixing in three rivermouths of intermediate size using water chemistry, stable isotopes, and current profiling over a five-month period. In rivermouths of this size, the maximum depth of the rivermouth ecosystem influenced water mixing, with temperature-related, density-dependent wedging and layering that isolated lake water below river water occurring in deeper systems. The inherent size of the rivermouth ecosystem, local geomorphology, and human modifications such as shoreline armoring and dredging influenced mixing by altering the propensity for density differences to occur. The improved scientific understanding and framework for characterizing hydrogeomorphic processes in Great Lakes rivermouths across a disturbance gradient is useful for conservation, management, restoration, and protection of critical habitats needed by native species.     

Informing Watershed Connectivity Barrier Prioritization Decisions: A Synthesis

Water resources and transportation infrastructure such as dams and culverts provide countless socio‐economic benefits; however, this infrastructure can also disconnect the movement of organisms, sediment, and water through river ecosystems. Trade‐offs associated with these competing costs and benefits occur globally, with applications in barrier addition (e.g. dam and road construction), reengineering (e.g. culvert repair), and removal (e.g. dam removal and aging infrastructure). Barrier prioritization provides a unique opportunity to: (i) restore and reconnect potentially large habitat patches quickly and effectively and (ii) avoid impacts prior to occurrence in line with the mitigation hierarchy (i.e. avoid then minimize then mitigate). This paper synthesizes 46 watershed‐scale barrier planning studies and presents a procedure to guide barrier prioritization associated with connectivity for aquatic organisms. We focus on practical issues informing prioritization studies such as available data sets, methods, techniques, and tools. We conclude with a discussion of emerging trends and issues in barrier prioritization and key opportunities for enhancing the body of knowledge. Copyright © 2016 John Wiley & Sons, Ltd.     

Crossing boundaries between science and policy: Two case studies illustrate the importance of boundary organizations in the Great Lakes Basin

Boundary organizations are institutions that interface between science and policy by facilitating interactions between scientists, policy specialists, and other stakeholders to inform collaborative decision-making. Natural resource management in the Great Lakes Basin is complex and a shared exercise among two federal governments, eight states, two provinces, and over 200 sovereign Tribes, First Nations, and Métis. Many governmental agencies have recognized a need to effectively engage with other jurisdictions in order to bridge the gaps between scientific knowledge and policy decisions. As a result, boundary organizations have emerged to facilitate planning and implementation of collaborative governance frameworks. This commentary highlights how decades of shared governance of the world’s largest freshwater surface water system is augmented and assisted by boundary organizations in addressing two key Great Lakes management issues – Western Lake Erie Basin nutrient levels and Lake Michigan fisheries – which are complex, broad in scale, and pose challenges that must be addressed collaboratively across jurisdictions. While there are many governmental and non-governmental entities that engage in boundary organization-like behaviors, this commentary will be centered on three key institutions: The Great Lakes Executive Committee’s Annex 4 (Nutrients) Subcommittee, the Great Lakes Commission, and the Great Lakes Fishery Commission. We illustrate how each organization procedurally engages stakeholders, especially within state and provincial jurisdictions, to produce information and products that add breadth and capacity to manage the ecosystems of the Great Lakes. We also highlight areas of success and opportunities for improvement in collaborative governance frameworks now and into the future.     

Synthesis review on groundwater discharge to surface water in the Great Lakes Basin

Groundwater in the Great Lakes Basin (GLB) serves as a reservoir of approximately 4000 to 5500 km³ of water and is a significant source of water to the Great Lakes. Indirect groundwater inflow from tributaries of the Great Lakes may account for 5–25% of the total water inflow to the Great Lakes and in Lake Michigan it is estimated that groundwater directly contributes 2–2.5% of the total water inflow. Despite these estimates, there is great uncertainty with respect to the impact of groundwater on surface water in the GLB. In terms of water quantity, groundwater discharge is spatially and temporally variable from the reach to the basin scale. Reach scale preferential flow pathways in the sub-surface play an important role in delivering groundwater to surface water bodies, however their identification is difficult a priori with existing data and their impact at watershed to basin scale is unknown. This variability also results in difficulty determining the location and contribution of groundwater to both point and non-point source surface water contamination. With increasing human population in the GLB and the hydrological changes brought on by continued human development and climate change, sound management of water resources will require a better understanding of groundwater surface–water interactions as heterogeneous phenomena both spatially and temporally. This review provides a summary of the scientific knowledge and gaps on groundwater–surface water interactions in the GLB, along with a discussion on future research directions.     

Acoustically derived habitat associations of sympatric invasive bigheaded carps in a large river ecosystem

Bigheaded carp (Hypophthalmichthys spp.) occur throughout much of the Mississippi Basin, USA. Efforts to control the spread of these invasive species require information on their spatial ecology, though sampling is hindered by their broad extent, habitat tolerances, and species‐specific behaviour. Mobile hydroacoustics was used to quantify habitat and depth use of bigheaded carp over four years in the heavily invaded Lower Illinois River, a major Mississippi tributary and potential dispersal pathway to the Great Lakes. Horizontally oriented transducers (combined with capture gear for species designation) enabled sampling of the main habitat features in this large flood plain river. Silver carp (Hypophthalmichthys molitrix) were dominant over bighead carp (Hypophthalmichthys nobilis) at all but one site, although habitat use was similar for both species. Densities were highest in lotic backwaters, followed by lentic backwaters and nearshore main channel, with lowest densities in the mid main channel. Bigheaded carp size and species composition were independent of habitat type. Depth associations were similar for both species, with average occurrence at 2.5–3.5 m in the main channel and 1–2 m in backwaters. However, depth relative to the river bed was largely similar across habitat types. Bigheaded carp density and depth use in the main channel were linked non‐linearly to river discharge and water temperature, respectively; densities were reduced during high discharge, whereas depth use became shallower at higher temperatures. Density–hydrology trends were less apparent in backwaters. These findings highlight critical aspects of bigheaded carp spatial ecology that will facilitate effective management in invaded and at‐risk ecosystems.     

Great Lakes coastal fish habitat classification and assessment

Basin-scale assessment of fish habitat in Great Lakes coastal ecosystems would increase our ability to prioritize fish habitat management and restoration actions. As a first step in this direction, we identified key habitat factors associated with highest probability of occurrence for several societally and ecologically important coastal fish species as well as community metrics, using data from the Great Lakes Aquatic Habitat Framework (GLAHF), Great Lakes Environmental Indicators (GLEI) and Coastal Wetland Monitoring Program (CWMP). Secondly, we assessed whether species-specific habitat was threatened by watershed-level anthropogenic stressors. In the southern Great Lakes, key habitat factors for determining presence/absence of several species of coastal fish were chlorophyll concentrations, turbidity, and wave height, whereas in the northern ecoprovince temperature was the major habitat driver for most of the species modeled. Habitat factors best explaining fish richness and diversity were bottom slope and chlorophyll a. These models could likely be further improved with addition of high-resolution submerged macrophyte complexity data which are currently unavailable at the basin-wide scale. Proportion of invasive species was correlated primarily with increasing maximum observed inorganic turbidity and chlorophyll a. We also demonstrate that preferred habitat for several coastal species and high-diversity areas overlap with areas of high watershed stress. Great Lakes coastal wetland fish are a large contributor to ecosystem services as well as commercial and recreational fishery harvest, and scalable basin-wide habitat models developed in this study may be useful for informing management actions targeting specific species or overall coastal fish biodiversity.     

Analysis of changes in the Great Lakes hydro-climatic variables

A study of changes in hydro-climatology of the Great Lakes was performed incorporating the nonparametric Mann–Kendall trend detection test and a recently developed Bayesian multiple change point detection model. The Component Net Basin Supply (C-NBS) and its components (runoff, precipitation, evaporation) as well as water levels of Great Lakes were analyzed for gradual (i.e. trend type) and abrupt (i.e. shift type) nonstationary behaviors at seasonal and annual scales. It was found that the C-NBS experienced significant upward trends only in the lower Great Lakes (Erie, Ontario) during the summer portion of the year. At an annual scale upward trends were observed only in Lake Ontario. Change point analysis suggested an upward shift in Great Lakes C-NBS in the late 1960s and early 1970s. A combination of gradual and abrupt change analysis of Great Lakes water levels indicated a common upward shift along with a change in trend direction around the early 1970s. It was also found that precipitation and runoff are on a plateau and in some cases on a decreasing course following an increasing trend in the early twentieth century. Results obtained from this study show that the hydro-climatology of Great Lakes is characterized by nonstationary behavior. Changes in this behavior have caused the Great Lakes water levels to decrease during the last few decades. This study provides valuable insights into the nature of the nonstationary behavior of hydro-climatic variables of Great Lakes and contributes useful information to the future water management planning.     

A decision support tool for measuring and tracking the social benefits of water resources in Michigan coastal communities

This Research Study was conducted to demonstrate and measure social wellbeing in Michigan coastal communities resulting from investments in local water-related projects and resource development that can lead to community vibrancy and to provide a model for communities throughout Michigan and the Great Lakes Basin. The primary goal of the study was to develop and implement an online Community Vibrancy Dashboard that would assist planners, decision makers, business leaders, and residents in defining, reviewing, and tracking community vibrancy. The study was supported by the Michigan Office of the Great Lakes under the 2016 Michigan Water Strategy and funded through the Great Lakes Restoration Initiative.Four coastal communities in Michigan – Alpena, Manistee, Port Huron, and Sault Ste. Marie – participated in the study. These communities were selected because of their long economic and cultural histories with the Great Lakes, all are similar in size, and all have conducted relatively recent water-related resource restoration projects and were willing to participate.This study demonstrates how community engagement can result in measurable social indicators of community vibrancy that focus on the use of and connectedness to water resources in the Great Lakes Region. The study resulted in an innovative online visualization toolkit that provides opportunities for public review of local water projects and their resultant contributions to community vibrancy. The Community Vibrancy Dashboard provides timely and visible feedback to local leaders, planners, and decision makers on past and future projects and a means of tracking progress in meeting community vibrancy goals.     

Historical genetic connectivity of lake sturgeon in a dammed Great Lakes tributary

Lake sturgeon (Acipenser fulvescens) populations are the focus of rehabilitation efforts across the Great Lakes. Although historical fisheries were a major cause of population collapses, habitat fragmentation and/or loss and reduced access to spawning and juvenile habitat impose contemporary challenges for population recovery. The loss of connectivity between habitat types required by different life stages may particularly limit recruitment rates, inhibiting population increase towards recovery targets. We used microsatellite DNA genotyping to assess population structure, diversity, and historical connectivity of lake sturgeon in the Black Sturgeon River watershed, a major tributary of Black Bay, Lake Superior with both historical and contemporary dams. Genotype data from lake sturgeon sampled above and below an existing major barrier, as well as from lakes in the upper watershed, showed evidence of historical connectivity throughout the watershed. Despite the existing barrier fragmenting the river and preventing upstream migration, lake sturgeon from the Black Sturgeon watershed showed clear membership to a single ancestral gene pool. Estimates of genetic effective population size (N_e) for the above- and below-barrier population segments were reduced compared to the larger (watershed level) gene pool. Although the longevity of lake sturgeon has largely enabled the retention of historical genetic diversity for the population in the watershed, the reduced productive capacity of this significant tributary may have implications for recovery rates for the regional Lake Superior metapopulation. Restoring connectivity among habitats would benefit the long-term conservation and management of this species throughout this river system, and potentially the regional metapopulation.     

典型约束型河网规划

以常熟市尚湖镇虞西片区的典型约束型河网为研究对象,采用河网水动力模型对约束型河网的结构连通性和河流水资源调配进行了规划研究。结果表明,控制条件下,采用空间结构连通和河网水流计算相结合的方法能充分满足尚湖镇虞西河网水资源分配需求,优化局部河系功能;通过多方案的河网水资源配置,望虞河多口门引水和锡北运河套闸联合调度方案能充分增强河网流动性,保证各水系功能区内水资源需求平衡和潜在的生态环境需水。该方法还能为水系调整提供合理的河道工程规模和设计参数,为保护约束型河网提供技术支持。     

Towards improving an Area of Concern: Main-channel habitat rehabilitation priorities for the Maumee River

The Maumee River watershed in the Laurentian Great Lakes Basin has been impacted by decades of pollution and habitat modification due to human settlement and development. As such, the lower 35 km of the Maumee River and several smaller adjacent watersheds comprising over 2000 km² were designated the Maumee Area of Concern (AOC) under the revised Great Lakes Water Quality Agreement in 1987. As part of pre-rehabilitation assessments in the Maumee AOC, we assessed fish and invertebrate communities in river km 24–11 of the Maumee River to identify: 1) areas that exhibit the highest biodiversity, 2) habitat characteristics associated with high biodiversity areas, 3) areas in need of protection from further degradation, and 4) areas that could feasibly be rehabilitated to increase biodiversity. Based on benthic trawl data, shallow water habitats surrounding large island complexes had the highest fish diversity and catch per unit effort (CPUE). Electrofishing displayed similar fish diversity and CPUE patterns across habitat types early in the study but yielded no discernable fish diversity or CPUE patterns towards the end of our study. Although highly variable among study sites, macroinvertebrate density was greatest in shallow water habitats <2.5 m and around large island complexes. Our results provide valuable baseline data that could act as a foundation for developing rehabilitation strategies in the lower Maumee River and for assessing the effectiveness of future aquatic habitat rehabilitation projects. In addition to increasing in-channel habitat, watershed-scale improvements of water quality might be necessary to ensure rehabilitation strategies are successful.     

Environmental factors influencing annual sucker (Catostomus sp.) migration into a Great Lakes tributary

Fish migration in rivers is a growing area of concern as mounting anthropogenic influences, particularly fragmentation from dams and barriers, constitute major threats to global river species diversity. Barriers can impede the movement of fishes between areas critical to the completion of their lifecycle, affecting both population and ecosystem viability. In response, fish passage solutions have been identified as a critical need to maintain fisheries viability in the Laurentian Great Lakes, and around the world. Pivotal to the success of these fish passage solutions is a more complete understanding of the movement phenology and environmental cues that instigate migration. We used a dual-frequency identification sonar (DIDSON) to evaluate environmental triggers of river entry during spring and summer for three size classes of migratory fishes in the Boardman River, a Lake Michigan tributary. Our results indicate that medium size fish (>30 cm and < 50 cm), primarily composed of white sucker Catostomus commersonii and longnose sucker Catostomus catostomus were 21% more likely to enter the river at sunset and 25% less likely at midnight in comparison to midday. Entry rates of medium fish increased 6% for every 1 °C increase in river temperature, 4% for every 1 m³/s increase in river discharge from the day prior, and were reduced by 1% for every 10 cm increase in lake level. Understanding these processes in the tributaries of the Great Lakes is important to inform the fish passage solutions currently being developed for the Boardman River, and to inform management regulations for Great Lakes migratory fishes.     

Exploring market-based environmental policy for groundwater management and ecosystem protection for the Great Lakes region: Lessons learned

The Great Lakes–St. Lawrence River Basin Water Resources Compact (the Compact) was created to protect future water supplies and aquatic ecosystems in the Great Lakes. The Compact requires the eight Great Lakes state to regulate, among other things, large withdrawals of groundwater and surface water so that they do not negatively affect stream flows and ecosystems within the Great Lakes Basin. Thus, the Compact raises the possibility of increased restrictions on groundwater withdrawals in many locations throughout the Great Lakes region. However, restricting withdrawals is likely to encounter opposition from water users when such restrictions are viewed as an infringement on existing water use rights and/or as negatively impacting local economic development. Such conflicts could hinder effective implementation of state and regional water policy. This paper explores the application of a market-based environmental management tool called “Conservation Credit Offsets Trading (CCOT)” that could facilitate allocation of groundwater withdrawals, and develops a framework for guiding the implementation of CCOT within the context of a groundwater permitting system. Using a watershed in southwestern Michigan, this study demonstrates how bio-physical information and input from various local stakeholders were combined to aid groundwater policy designed to achieve the objective of no net (adverse) impact on stream ecosystems. By allowing flexibility through trading of conservation credit offsets, this groundwater policy tool appears to be more politically acceptable than traditional, less flexible, regulations. The results and discussion provide useful lessons learned with relevance to other areas in the Great Lakes Basin.     

Impacts of land-use/cover changes on the hydrology of the transboundary Mara River, Kenya/Tanzania

The Mara River is the lifeline of the transboundary Mara basin across Kenya and Tanzania. The basin is considered one of the more serene subcatchments of the Lake Victoria Basin and ultimately the Nile Basin, and traverses the famous Maasai Mara and Serengeti National Parks. The basin also contains forests, large‐scale farms, smallholder farms, pastoral grazing lands, as well as hunter gatherers and fishers. There is growing concern, however, regarding land degradation in the basin, particularly deforestation in the headwaters, that is affecting the natural resource base and the river flows. Accurate scientific data are required to advise policy, and to plan appropriate mitigation measures. This study utilizes remote sensing and geographical information system (GIS) tools, and hydrological and ground‐truth studies to determine the magnitude of the land‐use/cover changes in the Mara River Basin, and the effects of these changes on the river flows over the last 30 years. The study results indicate that land‐use/cover changes have occurred. In 1973, for example, rangelands (savannah, grasslands and shrublands) covered 10 989 km² (79%) of the total basin area. The rangelands had been reduced to 7245 km² (52%) by 2000, however, while the forest areas were reduced by 32% over the same period. These changes have been attributed to the encroachment of agriculture, which has more than doubled (203%) its land area over the same period. The hydrology of the Mara River also has changed, with sharp increases in flood peak flows by 7%, and an earlier occurrence of these peaks by 4 days between 1973 and 2000. There is evidence of increased soil erosion in the upper catchments, with silt build‐up in the downstream floodplains. This has caused the Mara wetland to expand by 387%, adversely affecting riparian agriculture. There is need for urgent action to stem the land degradation of the Mara River Basin, including planning and implementing appropriate mitigation measures.     

Sustainable fisheries management in the Great Lakes: Scientific and operational challenges

Fisheries managers seek to sustain Great Lakes' fish populations in a large, complex lake‐watershed ecosystem responding to often competing issues: non‐indigenous species, resource allocation and environmental quality. Within the past 200 years, human activity has caused dramatic changes in the character of this ecosystem. Before the 1900s, the offshore fish communities in each of the Great Lakes were dominated by the piscivorous lake trout and burbot. The current fish fauna of the Great Lakes' basin includes 179 species representing 29 families in 18 orders and two classes of fish. Twenty‐five non‐indigenous fish species have established populations in the Great Lakes' ecosystem. Sustainable management of Great Lakes' fisheries depends on social, economic and ecological factors. Hundreds of millions of dollars are spent annually to protect and preserve Great Lakes' fisheries and their associated ecosystems. Management of Great Lakes' fisheries on a species‐by‐species basis is pointless. Recreational fishing provides larger economic benefits on the Great Lakes, compared to commercial fisheries. Further, quota management, even when practiced at levels well below maximum sustainable yield, does not lead to stable fish communities. Management will be constrained more by ecological reality than by economic forces, but ultimately a managed system comprised of both indigenous and non‐indigenous fishes is a logical objective.