Learning Patterns from COVID-19 Instances

Coronavirus disease, which resulted from the SARS-CoV-2 virus, has spread worldwide since early 2020 and has been declared a pandemic by the World Health Organization (WHO). Coronavirus disease is also termed COVID-19. It affects the human respiratory system and thus can be traced and tracked from the Chest X-Ray images. Therefore, Chest X-Ray alone may play a vital role in identifying COVID-19 cases. In this paper, we propose a Machine Learning (ML) approach that utilizes the X-Ray images to classify the healthy and affected patients based on the patterns found in these images. The article also explores traditional, and Deep Learning (DL) approaches for COVID-19 patterns from Chest X-Ray images to predict, analyze, and further understand this virus. The experimental evaluation of the proposed approach achieves 97.5% detection performance using the DL model for COVID-19 versus normal cases. In contrast, for COVID-19 versus Pneumonia Virus scenario, we achieve 94.5% accurate detections. Our extensive evaluation in the experimental section guides and helps in the selection of an appropriate model for similar tasks. Thus, the approach can be used for medical usages and is particularly pertinent in detecting COVID-19 positive patients using X-Ray images alone.     

Differentiation of COVID-19 conditions in planar chest radiographs using optimized convolutional neural networks

In this study, an attempt has been made to differentiate Novel Coronavirus-2019 (COVID-19) conditions from healthy subjects in Chest radiographs using a simplified end-to-end Convolutional Neural Network (CNN) model and occlusion sensitivity maps. Early detection and faster automated screening of the COVID-19 patients is essential. For this, the images are considered from publicly available datasets. Significant biomarkers representing critical image features are extracted from CNN by experimentally investigating on cross-validation methods and hyperparameter settings. The performance of the network is evaluated using standard metrics. Perturbation based occlusion sensitivity maps are employed on the features obtained from the classification model to visualise the localization of abnormal areas. Results demonstrate that the simplified CNN model with optimised parameters is able to extract significant features with a sensitivity of 97.35% and F-measure of 96.71% to detect COVID-19 images. The algorithm achieves an Area Under the Curve-Receiver Operating Characteristic score of 99.4% with Matthews correlation coefficient of 0.93. High value of Diagnostic odds ratio is also obtained. Occlusion sensitivity maps provide precise localization of abnormal regions by identifying COVID-19 conditions. As early detection through chest radiographic images are useful for automated screening of the disease, this method appears to be clinically relevant in providing a visual diagnostic solution using a simplified and efficient model.

     

Real-time COVID-19 detection over chest x-ray images in edge computing

Severe Coronavirus Disease 2019 (COVID-19) has been a global pandemic which provokes massive devastation to the society, economy, and culture since January 2020. The pandemic demonstrates the inefficiency of superannuated manual detection approaches and inspires novel approaches that detect COVID-19 by classifying chest x-ray (CXR) images with deep learning technology. Although a wide range of researches about bran-new COVID-19 detection methods that classify CXR images with centralized convolutional neural network (CNN) models have been proposed, the latency, privacy, and cost of information transmission between the data resources and the centralized data center will make the detection inefficient. Hence, in this article, a COVID-19 detection scheme via CXR images classification with a lightweight CNN model called MobileNet in edge computing is proposed to alleviate the computing pressure of centralized data center and ameliorate detection efficiency. Specifically, the general framework is introduced first to manifest the overall arrangement of the computing and information services ecosystem. Then, an unsupervised model DCGAN is employed to make up for the small scale of data set. Moreover, the implementation of the MobileNet for CXR images classification is presented at great length. The specific distribution strategy of MobileNet models is followed. The extensive evaluations of the experiments demonstrate the efficiency and accuracy of the proposed scheme for detecting COVID-19 over CXR images in edge computing.     

Deep learning based detection of COVID-19 from chest X-ray images

The whole world is facing a health crisis, that is unique in its kind, due to the COVID-19 pandemic. As the coronavirus continues spreading, researchers are concerned by providing or help provide solutions to save lives and to stop the pandemic outbreak. Among others, artificial intelligence (AI) has been adapted to address the challenges caused by pandemic. In this article, we design a deep learning system to extract features and detect COVID-19 from chest X-ray images. Three powerful networks, namely ResNet50, InceptionV3, and VGG16, have been fine-tuned on an enhanced dataset, which was constructed by collecting COVID-19 and normal chest X-ray images from different public databases. We applied data augmentation techniques to artificially generate a large number of chest X-ray images: Random Rotation with an angle between ??10 and 10 degrees, random noise, and horizontal flips. Experimental results are encouraging: the proposed models reached an accuracy of 97.20?% for Resnet50, 98.10?% for InceptionV3, and 98.30?% for VGG16 in classifying chest X-ray images as Normal or COVID-19. The results show that transfer learning is proven to be effective, showing strong performance and easy-to-deploy COVID-19 detection methods. This enables automatizing the process of analyzing X-ray images with high accuracy and it can also be used in cases where the materials and RT-PCR tests are limited.

     

Leveraging Multimodal Ensemble Fusion-Based Deep Learning for COVID-19 on Chest Radiographs

Recently, COVID-19 has posed a challenging threat to researchers, scientists, healthcare professionals, and administrations over the globe, from its diagnosis to its treatment. The researchers are making persistent efforts to derive probable solutions for managing the pandemic in their areas. One of the widespread and effective ways to detect COVID-19 is to utilize radiological images comprising X-rays and computed tomography (CT) scans. At the same time, the recent advances in machine learning (ML) and deep learning (DL) models show promising results in medical imaging. Particularly, the convolutional neural network (CNN) model can be applied to identifying abnormalities on chest radiographs. While the epidemic of COVID-19, much research is led on processing the data compared with DL techniques, particularly CNN. This study develops an improved fruit fly optimization with a deep learning-enabled fusion (IFFO-DLEF) model for COVID-19 detection and classification. The major intention of the IFFO-DLEF model is to investigate the presence or absence of COVID-19. To do so, the presented IFFO-DLEF model applies image pre-processing at the initial stage. In addition, the ensemble of three DL models such as DenseNet169, EfficientNet, and ResNet50, are used for feature extraction. Moreover, the IFFO algorithm with a multilayer perceptron (MLP) classification model is utilized to identify and classify COVID-19. The parameter optimization of the MLP approach utilizing the IFFO technique helps in accomplishing enhanced classification performance. The experimental result analysis of the IFFO-DLEF model carried out on the CXR image database portrayed the better performance of the presented IFFO-DLEF model over recent approaches.     

“Fast deep learning computer-aided diagnosis of COVID-19 based on digital chest x-ray images”

Applied Intelligence - Coronavirus disease 2019 (COVID-19) is a novel harmful respiratory disease that has rapidly spread worldwide. At the end of 2019, COVID-19 emerged as a previously unknown...     

Automatic detection of coronavirus disease (COVID-19) using X-ray images and deep convolutional neural networks

The 2019 novel coronavirus disease (COVID-19), with a starting point in China, has spread rapidly among people living in other countries and is approaching approximately 101,917,147 cases worldwide according to the statistics of World Health Organization. There are a limited number of COVID-19 test kits available in hospitals due to the increasing cases daily. Therefore, it is necessary to implement an automatic detection system as a quick alternative diagnosis option to prevent COVID-19 spreading among people. In this study, five pre-trained convolutional neural network-based models (ResNet50, ResNet101, ResNet152, InceptionV3 and Inception-ResNetV2) have been proposed for the detection of coronavirus pneumonia-infected patient using chest X-ray radiographs. We have implemented three different binary classifications with four classes (COVID-19, normal (healthy), viral pneumonia and bacterial pneumonia) by using five-fold cross-validation. Considering the performance results obtained, it has been seen that the pre-trained ResNet50 model provides the highest classification performance (96.1% accuracy for Dataset-1, 99.5% accuracy for Dataset-2 and 99.7% accuracy for Dataset-3) among other four used models.

     

Automatic COVID-19 detection mechanisms and approaches from medical images: a systematic review

Multimedia Tools and Applications - Since early 2020, Coronavirus Disease 2019 (COVID-19) has spread widely around the world. COVID-19 infects the lungs, leading to breathing difficulties. Early...     

Role of digital,hyper spectral,and SAR images in detection of plant disease with deep learning network

In agriculture, plants plays a major role and taking attention of plants is very critical. Generally, the plant are affected through various diseases like fungi, virus and bacteria. Finding of these diseases are main challenging task for a plant disease identification and classification. In the past few years, machine learning (ML) methods have been developed for the plant disease detection. But, the advancement in a subsection of ML, that is, DL (deep learning) models provide a great solution in the agricultural areas in the recent decades. The main objective of the paper is to provide the survey of numerous DL classification models for the plant disease detection by analysing the digital, hyper spectral and SAR images. This paper provide the review of different deep learning architectures which is utilized for plant disease identification and classification. The role of digital, hyper spectral and SAR images with deep learning models for plant disease detection is reviewed. Further, the different well-known DL architecture for plant disease classification is studied. In addition, the current challenges and their solutions of plant disease identification are discussed. Also, the application of DL and advantages/disadvantages of DL structure in plant domain are presented. Finally, the future scope of DL structure for plant domain is discussed. The preparation of this review is to permit future research to learn higher competences of deep learning while identifying plant diseases by enhancing system performance and accuracy.

     

SELDNet: Sequenced encoder and lightweight decoder network for COVID-19 infection region segmentation

Segmenting regions of lung infection from computed tomography (CT) images shows excellent potential for rapid and accurate quantifying of Coronavirus disease 2019 (COVID-19) infection and determining disease development and treatment approaches. However, a number of challenges remain, including the complexity of imaging features and their variability with disease progression, as well as the high similarity to other lung diseases, which makes feature extraction difficult. To answer the above challenges, we propose a new sequence encoder and lightweight decoder network for medical image segmentation model (SELDNet). (i) Construct sequence encoders and lightweight decoders based on Transformer and deep separable convolution, respectively, to achieve different fine-grained feature extraction. (ii) Design a semantic association module based on cross-attention mechanism between encoder and decoder to enhance the fusion of different levels of semantics. The experimental results showed that the network can effectively achieve segmentation of COVID-19 infected regions. The dice of the segmentation result was 79.1%, the sensitivity was 76.3%, and the specificity was 96.7%. Compared with several state-of-the-art image segmentation models, our proposed SELDNet model achieves better results in the segmentation task of COVID-19 infected regions.     

A residual network-based framework for COVID-19 detection from CXR images

Neural Computing and Applications - In late 2019, a new Coronavirus disease (COVID-19) appeared in Wuhan, Hubei Province, China. The virus began to spread throughout many countries, affecting a...     

Corona-Nidaan: lightweight deep convolutional neural network for chest X-Ray based COVID-19 infection detection

The coronavirus COVID-19 pandemic is today’s major public health crisis, we have faced since the Second World War. The pandemic is spreading around the globe like a wave, and according to the World Health Organization’s recent report, the number of confirmed cases and deaths are rising rapidly. COVID-19 pandemic has created severe social, economic, and political crises, which in turn will leave long-lasting scars. One of the countermeasures against controlling coronavirus outbreak is specific, accurate, reliable, and rapid detection technique to identify infected patients. The availability and affordability of RT-PCR kits remains a major bottleneck in many countries, while handling COVID-19 outbreak effectively. Recent findings indicate that chest radiography anomalies can characterize patients with COVID-19 infection. In this study, Corona-Nidaan, a lightweight deep convolutional neural network (DCNN), is proposed to detect COVID-19, Pneumonia, and Normal cases from chest X-ray image analysis; without any human intervention. We introduce a simple minority class oversampling method for dealing with imbalanced dataset problem. The impact of transfer learning with pre-trained CNNs on chest X-ray based COVID-19 infection detection is also investigated. Experimental analysis shows that Corona-Nidaan model outperforms prior works and other pre-trained CNN based models. The model achieved 95% accuracy for three-class classification with 94% precision and recall for COVID-19 cases. While studying the performance of various pre-trained models, it is also found that VGG19 outperforms other pre-trained CNN models by achieving 93% accuracy with 87% recall and 93% precision for COVID-19 infection detection. The model is evaluated by screening the COVID-19 infected Indian Patient chest X-ray dataset with good accuracy.

     

Densely connected convolutional networks-based COVID-19 screening model

The extensively utilized tool to detect novel coronavirus (COVID-19) is a real-time polymerase chain reaction (RT-PCR). However, RT-PCR kits are costly and consume critical time, around 6 to 9 hours to classify the subjects as COVID-19(+) or COVID-19(-). Due to the less sensitivity of RT-PCR, it suffers from high false-negative results. To overcome these issues, many deep learning models have been implemented in the literature for the early-stage classification of suspected subjects. To handle the sensitivity issue associated with RT-PCR, chest CT scans are utilized to classify the suspected subjects as COVID-19 (+), tuberculosis, pneumonia, or healthy subjects. The extensive study on chest CT scans of COVID-19 (+) subjects reveals that there are some bilateral changes and unique patterns. But the manual analysis from chest CT scans is a tedious task. Therefore, an automated COVID-19 screening model is implemented by ensembling the deep transfer learning models such as Densely connected convolutional networks (DCCNs), ResNet152V2, and VGG16. Experimental results reveal that the proposed ensemble model outperforms the competitive models in terms of accuracy, f-measure, area under curve, sensitivity, and specificity.

     

Stacked-autoencoder-based model for COVID-19 diagnosis on CT images

With the outbreak of COVID-19, medical imaging such as computed tomography (CT) based diagnosis is proved to be an effective way to fight against the rapid spread of the virus. Therefore, it is important to study computerized models for infectious detection based on CT imaging. New deep learning-based approaches are developed for CT assisted diagnosis of COVID-19. However, most of the current studies are based on a small size dataset of COVID-19 CT images as there are less publicly available datasets for patient privacy reasons. As a result, the performance of deep learning-based detection models needs to be improved based on a small size dataset. In this paper, a stacked autoencoder detector model is proposed to greatly improve the performance of the detection models such as precision rate and recall rate. Firstly, four autoencoders are constructed as the first four layers of the whole stacked autoencoder detector model being developed to extract better features of CT images. Secondly, the four autoencoders are cascaded together and connected to the dense layer and the softmax classifier to constitute the model. Finally, a new classification loss function is constructed by superimposing reconstruction loss to enhance the detection accuracy of the model. The experiment results show that our model is performed well on a small size COVID-2019 CT image dataset. Our model achieves the average accuracy, precision, recall, and F1-score rate of 94.7%, 96.54%, 94.1%, and 94.8%, respectively. The results reflect the ability of our model in discriminating COVID-19 images which might help radiologists in the diagnosis of suspected COVID-19 patients.

     

AI aiding in diagnosing,tracking recovery of COVID-19 using deep learning on Chest CT scans

Coronavirus (COVID-19) has spread throughout the world, causing mayhem from January 2020 to this day. Owing to its rapidly spreading existence and high death count, the WHO has classified it as a pandemic. Biomedical engineers, virologists, epidemiologists, and people from other medical fields are working to help contain this epidemic as soon as possible. The virus incubates for five days in the human body and then begins displaying symptoms, in some cases, as late as 27 days. In some instances, CT scan based diagnosis has been found to have better sensitivity than RT-PCR, which is currently the gold standard for COVID-19 diagnosis. Lung conditions relevant to COVID-19 in CT scans are ground-glass opacity (GGO), consolidation, and pleural effusion. In this paper, two segmentation tasks are performed to predict lung spaces (segregated from ribcage and flesh in Chest CT) and COVID-19 anomalies from chest CT scans. A 2D deep learning architecture with U-Net as its backbone is proposed to solve both the segmentation tasks. It is observed that change in hyperparameters such as number of filters in down and up sampling layers, addition of attention gates, addition of spatial pyramid pooling as basic block and maintaining the homogeneity of 32 filters after each down-sampling block resulted in a good performance. The proposed approach is assessed using publically available datasets from GitHub and Kaggle. Model performance is evaluated in terms of F1-Score, Mean intersection over union (Mean IoU). It is noted that the proposed approach results in 97.31% of F1-Score and 84.6% of Mean IoU. The experimental results illustrate that the proposed approach using U-Net architecture as backbone with the changes in hyperparameters shows better results in comparison to existing U-Net architecture and attention U-net architecture. The study also recommends how this methodology can be integrated into the workflow of healthcare systems to help control the spread of COVID-19.

     

Forecasting COVID-19 outbreak progression using hybrid polynomial-Bayesian ridge regression model

Applied Intelligence - In 2020, Coronavirus Disease 2019 (COVID-19), caused by the SARS-CoV-2 (Severe Acute Respiratory Syndrome Corona Virus 2) Coronavirus, unforeseen pandemic put humanity at big...     

COVID-19 chest X-ray image classification in the presence of noisy labels

The Corona Virus Disease 2019 (COVID-19) has been declared a worldwide pandemic, and a key method for diagnosing COVID-19 is chest X-ray imaging. The application of convolutional neural network with medical imaging helps to diagnose the disease accurately, where the label quality plays an important role in the classification problem of COVID-19 chest X-rays. However, most of the existing classification methods ignore the problem that the labels are hardly completely true and effective, and noisy labels lead to a significant degradation in the performance of image classification frameworks. In addition, due to the wide distribution of lesions and the large number of local features of COVID-19 chest X-ray images, existing label recovery algorithms have to face the bottleneck problem of the difficult reuse of noisy samples. Therefore, this paper introduces a general classification framework for COVID-19 chest X-ray images with noisy labels and proposes a noisy label recovery algorithm based on subset label iterative propagation and replacement (SLIPR). Specifically, the proposed algorithm first obtains random subsets of the samples multiple times. Then, it integrates several techniques such as principal component analysis, low-rank representation, neighborhood graph regularization, and k-nearest neighbor for feature extraction and image classification. Finally, multi-level weight distribution and replacement are performed on the labels to cleanse the noise. In addition, for the label-recovered dataset, high confidence samples are further selected as the training set to improve the stability and accuracy of the classification framework without affecting its inherent performance. In this paper, three typical datasets are chosen to conduct extensive experiments and comparisons of existing algorithms under different metrics. Experimental results on three publicly available COVID-19 chest X-ray image datasets show that the proposed algorithm can effectively recover noisy labels and improve the accuracy of the image classification framework by 18.9% on the Tawsifur dataset, 19.92% on the Skytells dataset, and 16.72% on the CXRs dataset. Compared to the state-of-the-art algorithms, the gain of classification accuracy of SLIPR on the three datasets can reach 8.67%-19.38%, and the proposed algorithm also has certain scalability while ensuring data integrity.