Mapping tropical dry forest height, foliage height profiles and disturbance type and age with a time series of cloud-cleared Landsat and ALI image mosaics to characterize avian habitat

Remote sensing of forest vertical structure is possible with lidar data, but lidar is not widely available. Here we map tropical dry forest height (RMSE = 0.9 m, R² = 0.84, range 0.6-7 m), and we map foliage height profiles, with a time series of Landsat and Advanced Land Imager (ALI) imagery on the island of Eleuthera, The Bahamas, substituting time for vertical canopy space. We also simultaneously map forest disturbance type and age. We map these variables in the context of avian habitat studies, particularly for wintering habitat of an endangered Nearctic-Neotropical migrant bird, the Kirtland's Warbler (Dendroica kirtlandii). We also illustrate relationships between forest vertical structure, disturbance type and counts of forage species important to the Kirtland's Warbler. The ALI imagery and the Landsat time series are both critical to the result for forest height, which the strong relationship of forest height with disturbance type and age facilitates. Also unique to this study is that seven of the eight image time steps are cloud-cleared images: mosaics of the clear parts of several cloudy scenes. We created each cloud-cleared image, including a virtually seamless ALI image mosaic, with regression tree normalization. We also illustrate how viewing time series imagery as red-green-blue composites of tasseled cap wetness (RGB wetness composites) aids reference data collection for classifying tropical forest disturbance type and age. Our results strongly support current Landsat Program production of co-registered imagery, and they emphasize the value of seamless time series of cloud-cleared imagery.     

Physically based vertical vegetation structure retrieval from ICESat data: Validation using LVIS in White Mountain National Forest, New Hampshire, USA

Vegetation structure retrieval accuracies from spaceborne Geoscience Laser Altimeter System (GLAS) on the Ice, Cloud and land Elevation Satellite (ICESat) data are affected by surface topography, background noise and sensor saturation. This study uses a physical approach to remove surface topography effect from lidar returns to retrieve vegetation height from ICESat/GLAS data over slope terrains. Slope-corrected vegetation heights from ICESat/GLAS data were compared to airborne Laser Vegetation Imaging Sensor (LVIS) (20 m footprint size) and small-footprint lidar data collected in White Mountain National Forest, NH. Impact of slope on LVIS vegetation height estimates was assessed by comparing LVIS height before and after slope correction with small-footprint discrete-return lidar and field data.Slope-corrected GLAS vegetation heights match well with 98 percentile heights from small-footprint lidar (R² = 0.77, RMSE = 2.2 m) and top three LVIS mean (slope-corrected) heights (R² = 0.64, RMSE = 3.7 m). Impact of slope on LVIS heights is small, however, comparison of LVIS heights (without slope correction) with either small footprint lidar or field data indicates that our scheme improves the overall LVIS height accuracy by 0.4-0.7 m in this region. Vegetation height can be overestimated by 3 m over a 15° slope without slope correction. More importantly, both slope-corrected GLAS and LVIS height differences are independent of slope. Our results demonstrate the effectiveness of the physical approach to remove surface topography from large footprint lidar data to improve accuracy of maximum vegetation height estimates.GLAS waveforms were compared to aggregated LVIS waveforms in Bartlett Experimental Forest, NH, to evaluate the impact of background noise and sensor saturation on vegetation structure retrievals from ICESat/GLAS. We found that GLAS waveforms with sensor saturation and low background noise match well with aggregated LVIS waveforms, indicating these waveforms capture vertical vegetation structure well. However, waveforms with large noise often lead to mismatched waveforms with LVIS and underestimation of waveform extent and vegetation height. These results demonstrate the quality of ICESat/GLAS vegetation structure estimates.     

Modeling the height of young forests regenerating from recent disturbances in Mississippi using Landsat and ICESat data

Many forestry and earth science applications require spatially detailed forest height data sets. Among the various remote sensing technologies, lidar offers the most potential for obtaining reliable height measurement. However, existing and planned spaceborne lidar systems do not have the capability to produce spatially contiguous, fine resolution forest height maps over large areas. This paper describes a Landsat-lidar fusion approach for modeling the height of young forests by integrating historical Landsat observations with lidar data acquired by the Geoscience Laser Altimeter System (GLAS) instrument onboard the Ice, Cloud, and land Elevation (ICESat) satellite. In this approach, “young” forests refer to forests reestablished following recent disturbances mapped using Landsat time-series stacks (LTSS) and a vegetation change tracker (VCT) algorithm. The GLAS lidar data is used to retrieve forest height at sample locations represented by the footprints of the lidar data. These samples are used to establish relationships between lidar-based forest height measurements and LTSS-VCT disturbance products. The height of “young” forest is then mapped based on the derived relationships and the LTSS-VCT disturbance products. This approach was developed and tested over the state of Mississippi. Of the various models evaluated, a regression tree model predicting forest height from age since disturbance and three cumulative indices produced by the LTSS-VCT method yielded the lowest cross validation error. The R² and root mean square difference (RMSD) between predicted and GLAS-based height measurements were 0.91 and 1.97 m, respectively. Predictions of this model had much higher errors than indicated by cross validation analysis when evaluated using field plot data collected through the Forest Inventory and Analysis Program of USDA Forest Service. Much of these errors were due to a lack of separation between stand clearing and non-stand clearing disturbances in current LTSS-VCT products and difficulty in deriving reliable forest height measurements using GLAS samples when terrain relief was present within their footprints. In addition, a systematic underestimation of about 5 m by the developed model was also observed, half of which could be explained by forest growth that occurred between field measurement year and model target year. The remaining difference suggests that tree height measurements derived using waveform lidar data could be significantly underestimated, especially for young pine forests. Options for improving the height modeling approach developed in this study were discussed.     

Assessment of the impacts of surface topography, off-nadir pointing and vegetation structure on vegetation lidar waveforms using an extended geometric optical and radiative transfer model

In order to prioritize the measurement requirements and accuracies of the two new lidar missions, a physical model is required for a fundamental understanding of the impact of surface topography, footprint size and off-nadir pointing on vegetation lidar waveforms and vegetation height retrieval. In this study, we extended a well developed Geometric Optical and Radiative Transfer (GORT) vegetation lidar model to take into account for the impacts of surface topography and off-nadir pointing on vegetation lidar waveforms and vegetation height retrieval and applied this extended model to assess the aforementioned impacts on vegetation lidar waveforms and height retrieval.Model simulation shows that surface topography and off-nadir pointing angle stretch waveforms and the stretching effect magnifies with footprint size, slope and off-nadir pointing angle. For an off-nadir pointing laser penetrating vegetation over a slope terrain, the waveform is either stretched or compressed based on the relative angle. The stretching effect also results in a disappearing ground peak return when slope or off-nadir pointing angle is larger than the “critical slope angle”, which is closely related to various vegetation structures and footprint size. Model simulation indicates that waveform shapes are affected by surface topography, off-nadir pointing angle and vegetation structure and it is difficult to remove topography effects from waveform extent based only on the shapes of waveform without knowing any surface topography information.Height error without correction of surface topography and off-nadir pointing angle is the smallest when the laser beams at the toward-slope direction and the largest from the opposite direction. Further simulation reveals within 20° of slope and off-nadir pointing angle, given the canopy height as roughly 25 m and the footprint size as 25 m, the error for vegetation height (RH100) ranges from − 2 m to greater than 12 m, and the error for the height at the medium energy return (RH50) from − 1 m to 4 m. The RH100 error caused by unknown surface topography and without correction of off-nadir pointing effect can be explained by an analytical formula as a function of vegetation height, surface topography, off-nadir pointing angle and footprint size as a first order approximation. RH50 is not much affected by topography, off-nadir pointing and footprint size. This forward model simulation can provide scientific guidance on prioritizing future lidar mission measurement requirements and accuracies.     

Forest structure and aboveground biomass in the southwestern United States from MODIS and MISR

Red band bidirectional reflectance factor data from the NASA MODerate resolution Imaging Spectroradiometer (MODIS) acquired over the southwestern United States were interpreted through a simple geometric-optical (GO) canopy reflectance model to provide maps of fractional crown cover (dimensionless), mean canopy height (m), and aboveground woody biomass (Mg ha^− 1) on a 250 m grid. Model adjustment was performed after dynamic injection of a background contribution predicted via the kernel weights of a bidirectional reflectance distribution function (BRDF) model. Accuracy was assessed with respect to similar maps obtained with data from the NASA Multiangle Imaging Spectroradiometer (MISR) and to contemporaneous US Forest Service (USFS) maps based partly on Forest Inventory and Analysis (FIA) data. MODIS and MISR retrievals of forest fractional cover and mean height both showed compatibility with the USFS maps, with MODIS mean absolute errors (MAE) of 0.09 and 8.4 m respectively, compared with MISR MAE of 0.10 and 2.2 m, respectively. The respective MAE for aboveground woody biomass was ~ 10 Mg ha^− 1, the same as that from MISR, although the MODIS retrievals showed a much weaker correlation, noting that these statistics do not represent evaluation with respect to ground survey data. Good height retrieval accuracies with respect to averages from high resolution discrete return lidar data and matches between mean crown aspect ratio and mean crown radius maps and known vegetation type distributions both support the contention that the GO model results are not spurious when adjusted against MISR bidirectional reflectance factor data. These results highlight an alternative to empirical methods for the exploitation of moderate resolution remote sensing data in the mapping of woody plant canopies and assessment of woody biomass loss and recovery from disturbance in the southwestern United States and in parts of the world where similar environmental conditions prevail.     

Forest canopy recovery from the 1938 hurricane and subsequent salvage damage measured with airborne LiDAR

The structure of a forest canopy often reflects its disturbance history. Such signatures of past disturbances or legacies can influence how the ecosystem functions across broad spatio-temporal scales. The 1938 hurricane and ensuing salvage operations which swept through New England represent the most recent large, infrequent disturbance (LID) in this region. Though devastating (downing ∼ 70% of the timber at Harvard Forest), the disturbance was not indiscriminate; it left behind a heterogeneous landscape comprised of different levels of canopy damage. We analyzed large-footprint LiDAR, from the Prospect Hill tract at Harvard Forest in central Massachusetts, to assess whether damage to the forest structure from the hurricane and subsequent timber extraction could be discerned after ∼ 65 years. Differences in LiDAR-derived measures of canopy height and vertical diversity were a function of the degree of damage from the 1938 hurricane and the predominant tree species which is, in part, a function of land use history. Higher levels of damage corresponded to slightly shorter canopies with a less even vertical distribution of return from the ground to the top. In addition, differences in canopy topography as revealed by spatial autocorrelation of canopy top heights were found among the damage classes. Less disturbed stands were characterized by lower levels of local autocorrelation for canopy height and higher levels of vertical diversity of LiDAR returns. These differences in canopy structure reveal that the forest tract has not completely recovered from the 1938 LID and salvage regime, which may have implications on arboreal and understory habitat and other ecosystem functions.     

Impact of spatial variability of tropical forest structure on radar estimation of aboveground biomass

Understanding the spatial variability of tropical forest structure and its impact on the radar estimation of aboveground biomass (AGB) is important to assess the scale and accuracy of mapping AGB with future low frequency radar missions. We used forest inventory plots in old growth, secondary succession, and forest plantations at the La Selva Biological Station in Costa Rica to examine the spatial variability of AGB and its impact on the L-band and P-band polarimetric radar estimation of AGB at multiple spatial scales. Field estimation of AGB was determined from tree size measurements and an allometric equation developed for tropical wet forests. The field data showed very high spatial variability of forest structure with no spatial dependence at a scale above 11 m in old-growth forest. Plot sizes of greater than 0.25 ha reduced the coefficients of variation in AGB to below 20% and yielded a stationary and normal distribution of AGB over the landscape. Radar backscatter measurements at all polarization channels were strongly positively correlated with AGB at three scales of 0.25 ha, 0.5 ha, and 1.0 ha. Among these measurements, PHV and LHV showed strong sensitivity to AGB < 300 Mg ha^− 1 and AGB < 150 Mg ha^− 1 respectively at the 1.0 ha scale. The sensitivity varied across forest types because of differences in the effects of forest canopy and gap structure on radar attenuation and scattering. Spatial variability of structure and speckle noise in radar measurements contributed equally to degrading the sensitivity of the radar measurements to AGB at spatial scales less than 1.0 ha. By using algorithms based on polarized radar backscatter, we estimated AGB with RMSE = 22.6 Mg ha^− 1 for AGB < 300 Mg ha^− 1 at P-band and RMSE = 23.8 Mg ha^− 1 for AGB < 150 Mg ha^− 1 at L-band and with the accuracy optimized at 1-ha scale within 95% confidence interval. By adding the forest height, estimated from the C-band Interferometry data as an independent variable to the algorithm, the AGB estimation improved beyond the backscatter sensitivity by 20% at P-band and 40% at L-band. The results suggested the estimation of AGB can be improved substantially from the fusion of lidar or InSAR derived forest height with the polarimetric backscatter.     

Estimation of tropical rain forest aboveground biomass with small-footprint lidar and hyperspectral sensors

Tropical forests are an important component of the global carbon balance, yet there is considerable uncertainty in estimates of their carbon stocks and fluxes, which are typically estimated through analysis of aboveground biomass in field plots. Remote sensing technology is critical for assessing fine-scale spatial variability of tropical forest biomass over broad spatial extents. The goal of our study was to evaluate relatively new technology, small-footprint, discrete-return lidar and hyperspectral sensors, for the estimation of aboveground biomass in a Costa Rican tropical rain forest landscape. We derived a suite of predictive metrics for field plots: lidar metrics were calculated from plot vertical height profiles and hyperspectral metrics included fraction of spectral mixing endmembers and narrowband indices that respond to photosynthetic vegetation, structure, senescence, health and water and lignin content. We used single- and two-variable linear regression analyses to relate lidar and hyperspectral metrics to aboveground biomass of plantation, managed parkland and old-growth forest plots. The best model using all 83 biomass plots included two lidar metrics, plot-level mean height and maximum height, with an r² of 0.90 and root-mean-square error (RMSE) of 38.3 Mg/ha. When the analysis was constrained to plantation plots, which had the most accurate field data, the r² of the model increased to 0.96, with RMSE of 10.8 Mg/ha (n = 32). Hyperspectral metrics provided lower accuracy in estimating biomass than lidar metrics, and models with a single lidar and hyperspectral metric were no better than the best model using two lidar metrics. These results should be viewed as an initial assessment of using these combined sensors to estimate tropical forest biomass; hyperspectral data were reduced to nine indices and three spectral mixture fractions, lidar data were limited to first-return canopy height, sensors were flown only once at different seasons, and we explored only linear regression for modeling. However, this study does support conclusions from studies at this and other climate zones that lidar is a premier instrument for mapping biomass (i.e., carbon stocks) across broad spatial scales.     

Characterizing 3D vegetation structure from space: Mission requirements

Human and natural forces are rapidly modifying the global distribution and structure of terrestrial ecosystems on which all of life depends, altering the global carbon cycle, affecting our climate now and for the foreseeable future, causing steep reductions in species diversity, and endangering Earth's sustainability.To understand changes and trends in terrestrial ecosystems and their functioning as carbon sources and sinks, and to characterize the impact of their changes on climate, habitat and biodiversity, new space assets are urgently needed to produce high spatial resolution global maps of the three-dimensional (3D) structure of vegetation, its biomass above ground, the carbon stored within and the implications for atmospheric green house gas concentrations and climate. These needs were articulated in a 2007 National Research Council (NRC) report (NRC, 2007) recommending a new satellite mission, DESDynI, carrying an L-band Polarized Synthetic Aperture Radar (Pol-SAR) and a multi-beam lidar (Light RAnging And Detection) operating at 1064 nm. The objectives of this paper are to articulate the importance of these new, multi-year, 3D vegetation structure and biomass measurements, to briefly review the feasibility of radar and lidar remote sensing technology to meet these requirements, to define the data products and measurement requirements, and to consider implications of mission durations. The paper addresses these objectives by synthesizing research results and other input from a broad community of terrestrial ecology, carbon cycle, and remote sensing scientists and working groups. We conclude that:

(1)

Current global biomass and 3-D vegetation structure information is unsuitable for both science and management and policy. The only existing global datasets of biomass are approximations based on combining land cover type and representative carbon values, instead of measurements of actual biomass. Current measurement attempts based on radar and multispectral data have low explanatory power outside low biomass areas. There is no current capability for repeatable disturbance and regrowth estimates.

(2)

The science and policy needs for information on vegetation 3D structure can be successfully addressed by a mission capable of producing (i) a first global inventory of forest biomass with a spatial resolution 1 km or finer and unprecedented accuracy (ii) annual global disturbance maps at a spatial resolution of 1 ha with subsequent biomass accumulation rates at resolutions of 1 km or finer, and (iii) transects of vertical and horizontal forest structure with 30 m along-transect measurements globally at 25 m spatial resolution, essential for habitat characterization.

We also show from the literature that lidar profile samples together with wall-to-wall L-band quad-pol-SAR imagery and ecosystem dynamics models can work together to satisfy these vegetation 3D structure and biomass measurement requirements. Finally we argue that the technology readiness levels of combined pol-SAR and lidar instruments are adequate for space flight. Remaining to be worked out, are the particulars of a lidar/pol-SAR mission design that is feasible and at a minimum satisfies the information and measurement requirement articulated herein.     

A pseudo-waveform technique to assess forest structure using discrete lidar data

The use of airborne laser scanning systems (lidar) to describe forest structure has increased dramatically since height profiling experiments nearly 30 years ago. The analyses in most studies employ a suite of frequency-based metrics calculated from the lidar height data, which are systematically eliminated from a full model using stepwise multiple linear regression. The resulting models often include highly correlated predictors with little physical justification for model formulation. We propose a method to aggregate discrete lidar height and intensity measurements into larger footprints to create “pseudo-waves”. Specifically, the returns are first sorted into height bins, sliced into narrow discrete elements, and finally smoothed using a spline function. The resulting “pseudo-waves” have many of the same characteristics of traditional waveform lidar data. We compared our method to a traditional frequency-based method to estimate tree height, canopy structure, stem density, and stand biomass in coniferous and deciduous stands in northern Wisconsin (USA). We found that the pseudo-wave approach had strong correlations for nearly all tree measurements including height (cross validated adjusted R² (R²_cv) = 0.82, RMSE_cv = 2.09 m), mean stem diameter (R²_cv = 0.64, RMSE_cv = 6.15 cm), total aboveground biomass (R²_cv = 0.74, RMSE_cv = 74.03 kg ha^− 1), and canopy coverage (R²_cv = 0.79, RMSE_cv = 5%). Moreover, the type of wave (derived from height and intensity or from height alone) had little effect on model formulation and fit. When wave-based and frequency-based models were compared, fit and mean square error were comparable, leading us to conclude that the pseudo-wave approach is a viable alternative because it has 1) an increased breadth of available metrics; 2) the potential to establish new meaningful metrics that capture unique patterns within the waves; 3) the ability to explain metric selection based on the physical structure of forests; and 4) lower correlation among independent variables.     

Measuring effective leaf area index, foliage profile, and stand height in New England forest stands using a full-waveform ground-based lidar

Effective leaf area index (LAI) retrievals from a scanning, ground-based, near-infrared (1064 nm) lidar that digitizes the full return waveform, the Echidna Validation Instrument (EVI), are in good agreement with those obtained from both hemispherical photography and the Li-Cor LAI-2000 Plant Canopy Analyzer. We conducted trials at 28 plots within six stands of hardwoods and conifers of varying height and stocking densities at Harvard Forest, Massachusetts, Bartlett Experimental Forest, New Hampshire, and Howland Experimental Forest, Maine, in July 2007. Effective LAI values retrieved by four methods, which ranged from 3.42 to 5.25 depending on the site and method, were not significantly different (β < 0.1 among four methods). The LAI values also matched published values well. Foliage profiles (leaf area with height) retrieved from the lidar scans, although not independently validated, were consistent with stand structure as observed and as measured by conventional methods. Canopy mean top height, as determined from the foliage profiles, deviated from mean RH100 values obtained from the Lidar Vegetation Imaging Sensor (LVIS) airborne large-footprint lidar system at 27 plots by − 0.91 m with RMSE = 2.04 m, documenting the ability of the EVI to retrieve stand height. The Echidna Validation Instrument is the first realization of the Echidna® lidar concept, devised by Australia's Commonwealth Scientific and Industrial Research Organization (CSIRO), for measuring forest structure using full-waveform, ground-based, scanning lidar.     

Remote sensing assessment of sediment re-suspension during Hurricane Frances in Apalachicola Bay, USA

Assessments of hurricane-induced environmental impacts are important to coastal management and risk analysis of ecosystems. In this study, a previously-developed remote sensing model for non-hurricane conditions by Wang et al. [Wang, H. Q., Hladik, C. M., Milla, K., Huang, W. R., Edmiston, L., Harwell, M. A., & Schalles, J. F. (in press). Detecting and mapping water quality indicators in Apalachicola Bay, Florida using MODIS Terra 250-m imagery. International Journal of Remote Sensing] has been substantially enhanced to investigate the impact of Hurricane Frances on total suspended solid (TSS) concentrations in Apalachicola Bay, Florida, USA. The remote sensing model uses 250-m Moderate Resolution Imaging Spectroradiometer (MODIS) to map TSS concentrations in the Bay. Eleven additional satellite imageries of MODIS were used in the model improvement and calibration. TSS concentration computation in the present model has been substantially improved by using a two-step process: firstly producing atmospheric correction intercept by an approach of in-water reflectance regression, and then building the regression model (R² = 0.8534, n = 25) between 250-m MODIS reflectance and observed TSS concentrations, which includes an extreme high TSS concentration data of 208 mg/L for severe storm or hurricane condition. Also, we carried out the validation of model (RMSE = 5.5 mg/L, n = 21). MODIS-derived TSS maps show substantial increases of TSS concentrations in the Bay during the passage of Hurricane Frances (the average TSS and maximum concentration about 54.3 mg/L and 165 mg/L in the Bay respectively) compared to under no-storm or -hurricane condition ( the average TSS and maximum concentration were approximately 24-27 mg/L and 58-64 mg/L). In comparison to those before and 5-days after the passage of the hurricane, the average TSS concentration in the Bay was twice higher while the maximum TSS concentration increased almost three times during the hurricane. This indicates that strong winds during the hurricane have caused strong sediment re-suspension. The spatial variations of TSS concentrations were analyzed by applying the hydrodynamic characteristics of wind-induced flow and tidal currents as described by Huang [Huang, W., Jones, K., & Wu, T. (2002). Modeling surface wind effects on subtidal salinity in Apalachicola Bay. Estuarine, Coastal and Shelf Science, 55(1), 33−46; Huang, W., Sun, H., Nnaji, S., & Jones, K. (2002). Tidal hydrodynamics in a multiple inlet estuary: Apalachicola Bay. International Journal of Coastal Research, 18(4), 674−684], which show westward currents in the Bay under westward wind condition. Therefore, the southwestward wind (about 50° from the north) during the hurricane induced southwestward currents and transport that resulted in the high TSS concentrations near West Pass in the Bay and the Gulf. Within the Bay, TSS concentrations were generally higher in the southern portion of the Bay, which was due mainly to transport by the combination of southwestward wind and southward residual flow from the Apalachicola River.     

Floodplain roughness parameterization using airborne laser scanning and spectral remote sensing

Floodplain roughness parameterization is one of the key elements of hydrodynamic modeling of river flow, which is directly linked to exceedance levels of the embankments of lowland fluvial areas. The present way of roughness mapping is based on manually delineated floodplain vegetation types, schematized as cylindrical elements of which the height (m) and the vertical density (the projected plant area in the direction of the flow per unit volume, m^− 1) have to be assigned using a lookup table. This paper presents a novel method of automated roughness parameterization. It delivers a spatially distributed roughness parameterization in an entire floodplain by fusion of CASI multispectral data with airborne laser scanning (ALS) data. The method consists of three stages: (1) pre-processing of the raw data, (2) image segmentation of the fused data set and classification into the dominant land cover classes (KHAT = 0.78), (3) determination of hydrodynamic roughness characteristics for each land cover class separately. In stage three, a lookup table provides numerical values that enable roughness calculation for the classes water, sand, paved area, meadows and built-up area. For forest and herbaceous vegetation, ALS data enable spatially detailed analysis of vegetation height and density. The hydrodynamic vegetation density of forest is mapped using a calibrated regression model. Herbaceous vegetation cover is further subdivided in single trees and non-woody vegetation. Single trees were delineated using a novel iterative cluster merging method, and their height is predicted (R² = 0.41, rse = 0.84 m). The vegetation density of single trees was determined in an identical way as for forest. Vegetation height and density of non-woody herbaceous vegetation were also determined using calibrated regression models. A 2D hydrodynamic model was applied with the results of this novel method, and compared with a traditional roughness parameterization approach. The modeling results showed that the new method is well able to provide accurate output data. The new method provides a faster, repeatable, and more accurate way of obtaining floodplain roughness, which enables regular updating of river flow models.     

Distinguishing between live and dead standing tree biomass on the North Rim of Grand Canyon National Park, USA using small-footprint lidar data

Accurate estimation of live and dead biomass in forested ecosystems is important for studies of carbon dynamics, biodiversity, wildfire behavior, and for forest management. Lidar remote sensing has been used successfully to estimate live biomass, but studies focusing on dead biomass are rare. We used lidar data, in conjunction with field measurements from 58 plots to distinguish between and map standing live and dead tree biomass in the mixed coniferous forest of the North Rim of Grand Canyon National Park, USA. Lidar intensity and canopy volume were key variables for estimating live biomass, whereas for dead biomass, lidar intensity alone was critical for accurate estimation. Regression estimates of both live and dead biomass ranged between 0 and 600 Mg ha^− 1, with means of 195.08 Mg ha^− 1 and 65.73 Mg ha^− 1, respectively. Cross validation with field data resulted in correlation coefficients for predicted vs. observed of 0.85 for live biomass (RMSE = 50 Mg ha^− 1 and %RMSE (RMSE as a percent of the mean) = 26). For dead biomass, correlation was 0.79, RMSE was 42 Mg ha^− 1, and %RMSE was 63. Biomass maps revealed interesting patterns of live and dead standing tree biomass. Live biomass was highest in the ponderosa pine zone, and decreased from south to north through the mixed conifer and spruce-fir forest zones. Dead biomass exhibited a background range of values in these mature forests from zero to 100 Mg ha^− 1, with lower values in locations having higher live biomass. In areas with high dead biomass values, live biomass was near zero. These areas were associated with recent wildfires, as indicated by fire maps derived from the Monitoring Trends in Burn Severity Project (MTBS). Combining our dead biomass maps with the MTBS maps, we demonstrated the complementary power of these two datasets, revealing that MTBS burn intensity class can be described quantitatively in terms of dead biomass. Assuming a background range of dead biomass up to 100 Mg ha^− 1, it is possible to estimate and map the contribution to the standing dead tree biomass pool associated with recent wildfire.     

Using lidar and effective LAI data to evaluate IKONOS and Landsat 7 ETM+ vegetation cover estimates in a ponderosa pine forest

Structural and functional analyses of ecosystems benefit when high accuracy vegetation coverages can be derived over large areas. In this study, we utilize IKONOS, Landsat 7 ETM+, and airborne scanning light detection and ranging (lidar) to quantify coniferous forest and understory grass coverages in a ponderosa pine (Pinus ponderosa) dominated ecosystem in the Black Hills of South Dakota. Linear spectral mixture analyses of IKONOS and ETM+ data were used to isolate spectral endmembers (bare soil, understory grass, and tree/shade) and calculate their subpixel fractional coverages. We then compared these endmember cover estimates to similar cover estimates derived from lidar data and field measures. The IKONOS-derived tree/shade fraction was significantly correlated with the field-measured canopy effective leaf area index (LAI_e) (r²=0.55, p<0.001) and with the lidar-derived estimate of tree occurrence (r²=0.79, p<0.001). The enhanced vegetation index (EVI) calculated from IKONOS imagery showed a negative correlation with the field measured tree canopy effective LAI and lidar tree cover response (r²=0.30, r=−0.55 and r²=0.41, r=−0.64, respectively; p<0.001) and further analyses indicate a strong linear relationship between EVI and the IKONOS-derived grass fraction (r²=0.99, p<0.001). We also found that using EVI resulted in better agreement with the subpixel vegetation fractions in this ecosystem than using normalized difference of vegetation index (NDVI). Coarsening the IKONOS data to 30 m resolution imagery revealed a stronger relationship with lidar tree measures (r²=0.77, p<0.001) than at 4 m resolution (r²=0.58, p<0.001). Unmixed tree/shade fractions derived from 30 m resolution ETM+ imagery also showed a significant correlation with the lidar data (r²=0.66, p<0.001). These results demonstrate the power of using high resolution lidar data to validate spectral unmixing results of satellite imagery, and indicate that IKONOS data and Landsat 7 ETM+ data both can serve to make the important distinction between tree/shade coverage and exposed understory grass coverage during peak summertime greenness in a ponderosa pine forest ecosystem.     

An airborne lidar sampling strategy to model forest canopy height from Quickbird imagery and GEOBIA

High-resolution digital canopy models derived from airborne lidar data have the ability to provide detailed information on the vertical structure of forests. However, compared to satellite data of similar spatial resolution and extent, the small footprint airborne lidar data required to produce such models remain expensive. In an effort to reduce these costs, the primary objective of this paper is to develop an airborne lidar sampling strategy to model full-scene forest canopy height from optical imagery, lidar transects and Geographic Object-Based Image Analysis (GEOBIA). To achieve this goal, this research focuses on (i) determining appropriate lidar transect features (i.e., location, direction and extent) from an optical scene, (ii) developing a mechanism to model forest canopy height for the full-scene based on a minimum number of lidar transects, and (iii) defining an optimal mean object size (MOS) to accurately model the canopy composition and height distribution. Results show that (i) the transect locations derived from our optimal lidar transect selection algorithm accurately capture the canopy height variability of the entire study area; (ii) our canopy height estimation models have similar performance in two lidar transect directions (i.e., north-south and west-east); (iii) a small lidar extent (17.6% of total size) can achieve similar canopy height estimation accuracies as those modeled from the full lidar scene; and (iv) different MOS can lead to distinctly different canopy height results. By comparing the best canopy height estimate with the full lidar canopy height data, we obtained average estimation errors of 6.0 m and 6.8 m for conifer and deciduous forests at the individual tree crown/small tree cluster level, and an area weighted combined error of 6.2 m, which is lower than the provincial forest inventory height class interval (i.e., ≈ 9.0 m).     

The use of waveform lidar to measure northern temperate mixed conifer and deciduous forest structure in New Hampshire

The direct retrieval of canopy height and the estimation of aboveground biomass are two important measures of forest structure that can be quantified by airborne laser scanning at landscape scales. These and other metrics are central to studies attempting to quantify global carbon cycles and to improve understanding of the spatial variation in forest structure evident within differing biomes. Data acquired using NASA's Laser Vegetation Imaging Sensor (LVIS) over the Bartlett Experimental Forest (BEF) in central New Hampshire (USA) was used to assess the performance of waveform lidar in a northern temperate mixed conifer and deciduous forest.Using coincident plots established for this study, we found strong agreement between field and lidar measurements of height (r² = 0.80, p < 0.000) at the footprint level. Allometric calculations of aboveground biomass (AGBM) and LVIS metrics (AGBM: r² = 0.61, PRESS RMSE = 58.0 Mg ha^− 1, p < 0.000) and quadratic mean stem diameter (QMSD) and LVIS metrics (r² = 0.54, p = 0.002) also showed good agreement at the footprint level. Application of a generalized equation for determining AGBM proposed by Lefsky et al. (2002a) to footprint-level field data from Bartlett resulted in a coefficient of determination of 0.55; RMSE = 64.4 Mg ha^− 1; p = 0.002. This is slightly weaker than the strongest relationship found with the best-fit single term regression model.Relationships between a permanent grid of USDA Forest Service inventory plots and the mean values of aggregated LVIS metrics, however, were not as strong. This discrepancy suggests that validation efforts must be cautious in using pre-existing field data networks as a sole means of calibrating and verifying such remote sensing data. Stratification based on land-use or species composition, however, did provide the means to improve regression relationships at this scale. Regression models established at the footprint level for AGBM and QMSD were applied to LVIS data to generate predicted values for the whole of Bartlett. The accuracy of these models was assessed using varying subsets of the USFS NERS plot data. Coefficient of determinations ranged from fair to strong with aspects of land-use history and species composition influencing both the fit and the level of error seen in the predicted relationships.     

Impact of footprint diameter and off-nadir pointing on the precision of canopy height estimates from spaceborne lidar

A spaceborne lidar mission could serve multiple scientific purposes including remote sensing of ecosystem structure, carbon storage, terrestrial topography and ice sheet monitoring. The measurement requirements of these different goals will require compromises in sensor design. Footprint diameters that would be larger than optimal for vegetation studies have been proposed. Some spaceborne lidar mission designs include the possibility that a lidar sensor would share a platform with another sensor, which might require off-nadir pointing at angles of up to 16°. To resolve multiple mission goals and sensor requirements, detailed knowledge of the sensitivity of sensor performance to these aspects of mission design is required.This research used a radiative transfer model to investigate the sensitivity of forest height estimates to footprint diameter, off-nadir pointing and their interaction over a range of forest canopy properties. An individual-based forest model was used to simulate stands of mixed conifer forest in the Tahoe National Forest (Northern California, USA) and stands of deciduous forests in the Bartlett Experimental Forest (New Hampshire, USA). Waveforms were simulated for stands generated by a forest succession model using footprint diameters of 20 m to 70 m. Off-nadir angles of 0 to 16° were considered for a 25 m diameter footprint diameter.Footprint diameters in the range of 25 m to 30 m were optimal for estimates of maximum forest height (R² of 0.95 and RMSE of 3 m). As expected, the contribution of vegetation height to the vertical extent of the waveform decreased with larger footprints, while the contribution of terrain slope increased. Precision of estimates decreased with an increasing off-nadir pointing angle, but off-nadir pointing had less impact on height estimates in deciduous forests than in coniferous forests. When pointing off-nadir, the decrease in precision was dependent on local incidence angle (the angle between the off-nadir beam and a line normal to the terrain surface) which is dependent on the off-nadir pointing angle, terrain slope, and the difference between the laser pointing azimuth and terrain aspect; the effect was larger when the sensor was aligned with the terrain azimuth but when aspect and azimuth are opposed, there was virtually no effect on R² or RMSE. A second effect of off-nadir pointing is that the laser beam will intersect individual crowns and the canopy as a whole from a different angle which had a distinct effect on the precision of lidar estimates of height, decreasing R² and increasing RMSE, although the effect was most pronounced for coniferous crowns.     

Evaluation of the MODIS LAI product using independent lidar-derived LAI: A case study in mixed conifer forest

This study presents an alternative assessment of the MODIS LAI product for a 58,000 ha evergreen needleleaf forest located in the western Rocky Mountain range in northern Idaho by using lidar data to model (R² = 0.86, RMSE = 0.76) and map LAI at higher resolution across a large number of MODIS pixels in their entirety. Moderate resolution (30 m) lidar-based LAI estimates were aggregated to the resolution of the 1-km MODIS LAI product and compared to temporally-coincident MODIS retrievals. Differences in the MODIS and lidar-derived values of LAI were grouped and analyzed by several different factors, including MODIS retrieval algorithm, sun/sensor geometry, and sub-pixel heterogeneity in both vegetation and terrain characteristics. Of particular interest is the disparity in the results when MODIS LAI was analyzed according to algorithm retrieval class. We observed relatively good agreement between lidar-derived and MODIS LAI values for pixels retrieved with the main RT algorithm without saturation for LAI LAI ≤ 4. Moreover, for the entire range of LAI values, considerable overestimation of LAI (relative to lidar-derived LAI) occurred when either the main RT with saturation or back-up algorithm retrievals were used to populate the composite product regardless of sub-pixel vegetation structural complexity or sun/sensor geometry. These results are significant because algorithm retrievals based on the main radiative transfer algorithm with or without saturation are characterized as suitable for validation and subsequent ecosystem modeling, yet the magnitude of difference appears to be specific to retrieval quality class and vegetation structural characteristics.