Structural Aspects and Prediction of Calmodulin-Binding Proteins

Calmodulin (CaM) is an important intracellular protein that binds Ca²⁺ and functions as a critical second messenger involved in numerous biological activities through extensive interactions with proteins and peptides. CaM’s ability to adapt to binding targets with different structures is related to the flexible central helix separating the N- and C-terminal lobes, which allows for conformational changes between extended and collapsed forms of the protein. CaM-binding targets are most often identified using prediction algorithms that utilize sequence and structural data to predict regions of peptides and proteins that can interact with CaM. In this review, we provide an overview of different CaM-binding proteins, the motifs through which they interact with CaM, and shared properties that make them good binding partners for CaM. Additionally, we discuss the historical and current methods for predicting CaM binding, and the similarities and differences between these methods and their relative success at prediction. As new CaM-binding proteins are identified and classified, we will gain a broader understanding of the biological processes regulated through changes in Ca²⁺ concentration through interactions with CaM.     

森林抚育对森林生态系统的影响

伴随着我国社会经济的稳固发展,人们的生活质量逐渐有了明显改善,而在生态问题趋于严重使人们的环境保护意识显著提高的过程中,森林抚育对于森林生态系统的作用和价值愈发凸显。对此,文章针对森林抚育,从提高森林利用率、维持森林动植物生态平衡、增加可利用水资源等多个方面就其对森林生态系统的影响进行了分析,旨在给予相关森林保护工作者可行的帮助,并以此促进我国森林开发工作的可持续发展。     

道在山林，周弥六合——浙东天台山“洞天福地”的山岳景观流变及文化意象研究

道教洞天福地作为中国名山风景的经典类型之一，在宗教山岳景观中占据独特地位。浙东天台山水神秀，历代高道以入山隐修为主要目的，形成了道教在区域山林的景观文化基础。从天台山“神仙之乡”的文化背景出发，从“想象与实践”的视角切入，梳理了天台山洞天福地的景观流变：分析其“不死之福庭”地域性景观的形成经历了“赤城→桐柏”的信仰转移过程；以天台山为坐标，洞天福地格局打破了区域“层级”分布特征，而呈现大范围“州郡”空间格局。作为“联结点”的天台山，洞天世界沟通了宇宙、山、人3个基本场域，由此衍生出“洞宫”式和“周回”式山岳空间营建典范。旨在挖掘洞天福地中典型案例的价值，为中国洞天福地体系的构建提供理论依据。     

Accurate ensemble pruning with PL-bagging

Ensemble pruning deals with the selection of base learners prior to combination in order to improve prediction accuracy and efficiency. In the ensemble literature, it has been pointed out that in order for an ensemble classifier to achieve higher prediction accuracy, it is critical for the ensemble classifier to consist of accurate classifiers which at the same time diverse as much as possible. In this paper, a novel ensemble pruning method, called PL-bagging, is proposed. In order to attain the balance between diversity and accuracy of base learners, PL-bagging employs positive Lasso to assign weights to base learners in the combination step. Simulation studies and theoretical investigation showed that PL-bagging filters out redundant base learners while it assigns higher weights to more accurate base learners. Such improved weighting scheme of PL-bagging further results in higher classification accuracy and the improvement becomes even more significant as the ensemble size increases. The performance of PL-bagging was compared with state-of-the-art ensemble pruning methods for aggregation of bootstrapped base learners using 22 real and 4 synthetic datasets. The results indicate that PL-bagging significantly outperforms state-of-the-art ensemble pruning methods such as Boosting-based pruning and Trimmed bagging.     

中国菊花主题花展及其对行业发展的作用

中国的菊花主题花展(菊花展览)是最重要的赏菊形式,对我国3种主要类型的菊花展览,即综合性菊花展览(中国菊花展览会、国际博览会菊花专项展和各级城市菊花展)、菊花专类园和菊花花田花海的发展现状进行了研究,并分析了菊花展览在促进菊花产业发展、弘扬菊花文化、服务生态文明及美丽乡村建设、加强菊花非物质文化遗产保护中的重要作用,为推动我国菊花展览水平的提高提供借鉴。     

山西省森林植被对径流泥沙影响的研究

森林对径流量的影响是森林水文学研究的重要课题。该文通过大量实测水文资料 ,定量分析了部分流域森林对径流、泥沙、降水量等的影响。同时 ,森林对径流的影响 ,因气候、下垫面条件、植被类型和雨强等不同而存在差异     

Modeling alternative zoning strategies in forest management

To satisfy public demands for environmental values, forest companies are facing the prospect of a reduction in wood supply and increases in costs. Some Canadian provincial governments have proposed intensifying silviculture in special zones dedicated to timber production as the means for pushing out the forest possibility frontiers. In this paper, we compare the traditional two‐zone land allocation framework which includes ecological reserves and integrated forest management zones with the triad — a three‐zone scheme which adds a zone dedicated to intensive timber production. We compare the solutions of the mixed‐integer linear programs formulated under both land‐allocation frameworks. We explore through sensitivity analysis the conditions under which the triad regime can offset the impact on timber production from increased environmental demands. We show that under the realistic conditions characteristic to Coastal British Columbia, higher environmental demands may be satisfied under the triad regime without increasing the financial burdens on the industry or reducing its wood supply. This occurs, however, only if regulatory constraints in timber production zone are flexible.     

Harvesting small trees and forest residues

Eight countries collaborated and shared technical information on the harvesting of small trees and forest residues in a three year program. Proceedings and reports from workshops and reviews are summarized in a review of activities and harvesting systems of the participating countries. Four databases were developed for harvesting and transportation of these materials.     

Sediment chemistry and nutrient influx in a hydrologically restored bottomland hardwood forest in Midwestern USA

Exchanges of total N and C between a river and its floodplain forest have been enhanced by sedimentation processes during flood pulses at a 5‐ha bottomland hardwood forest located at the Olentangy River Wetland Research Park in central Ohio. In the spring of 2000, the forest was hydrologically restored by notching an artificial levee that had separated the Olentangy River and its floodplain forest for 100 years. One‐hundred flat sediment traps (30 cm × 30 cm) were used to collect sediment samples during spring/summer flooding events from 2003 to 2005. Results showed that sediment deposition is determined by the landscape variability during flooding events, Net sediment deposit in the wettest area averaged 134 ± 12 g‐dry wt m^?2 in 2003, 127 ± 17 g‐dry wt m^?2 in 2004 and 149 ± 23 g‐dry wt m^?2 in 2005. Total N and C sedimentation ranged from 0.49 to 0.92 g‐N m^?2 and 5.2 to 19.9 g‐C m^?2. Fe dominates the sediment chemistry and results show the elemental abundance in the order of Al > Fe > Ca > K > Mg > S > P > Na > Mn > Zn > B > Cu > Mo. A hydrologic pulsing index (HPI) could be used as an indicator for mass changes of energies with hydrologic pulsing events. Restoration of seasonally flooded bottomland forests could stimulate potentially large nutrient and Fe releases, which would eventually lead to an enhanced forest productivity and biodiversity. Copyright © 2007 John Wiley & Sons, Ltd.     

浅谈黄土高原重点水土流失区的林业生态工程建设

黄土高原重点水土流失区林业生态工程建设的现状可以用“三低”（造林成活率低、保存率低、林木生长率低）来概括，人工林具有矮化，纤细，低产，烯疏4个特征，自然条件，适地适树、苗木质量、造林技术、抚育管护等5个方面的问题是造成“三低”的主要原因，适地适树适法是现阶段防治中造林“三低”的主要技术途径，其核心是“林水平衡”合理布局，适地适树，重视经济树种、抗旱造林以及加强病、虫、鼠、免、牛、羊、危害防治，是搞好区内林业生态建设的主要技术措施。