Biosynthesis of the Myxobacterial Antibiotic Corallopyronin A

Corallopyronin A is a myxobacterial compound with potent antibacterial activity. Feeding experiments with labelled precursors resulted in the deduction of all biosynthetic building blocks for corallopyronin A and revealed an unusual feature of this metabolite: its biosynthesis from two chains, one solely PKS‐derived and the other NRPS/PKS‐derived. The starter molecule is believed to be carbonic acid or its monomethyl ester. The putative corallopyronin A biosynthetic gene cluster is a trans‐AT‐type mixed PKS/NRPS gene cluster, containing a β‐branching cassette. Striking features of this gene cluster are a NRPS‐like adenylation domain that is part of a PKS‐type module and is believed to be responsible for glycine incorporation, as well as split modules with individual domains occurring on different genes. It is suggested that CorB is a trans‐acting ketosynthase and it is proposed that it catalyses the Claisen condensation responsible for the interconnection of the two chains. Additionally, the stereochemistry of corallopyronin A was deduced by a combination of a modified Mosher's method and ozonolysis with subsequent chiral GC analyses.     

Copolymers of a new methacrylate monomer bearing oxime ester and ether with methyl methacrylate: Synthesis,characterization, monomer reactivity ratios,and biological activity

The free‐radical copolymerization of 2‐metil‐1‐{[(1‐{4‐[(4‐nitrobenzil)oksi]fenil}etilidene)amino]oksi}prop‐2‐en‐1‐on (NBOEMA) with methyl methacrylate (MMA) was carried out in 1,4‐dioxane at 65 ± 1°C. The copolymers were analyzed by Fourier transform infrared spectroscopy, ¹H‐NMR, ¹³C‐NMR, and gel permeation chromatography (GPC). Elemental analysis was used to determine the molar fractions of NBOEMA and MMA in the copolymers and for the characterization of the compounds. The monomer reactivity ratios were calculated according to the general copolymerization equation with the Kelen–Tudos and Fineman–Ross linearization methods. The polydispersity indices of the polymers, determined with GPC, suggested a strong tendency for chain termination by disproportionation. The thermal behaviors of the copolymers with various compositions were investigated by differential scanning calorimetry and thermogravimetric analysis. The glass‐transition temperature of the copolymers increased with increasing NBOEMA content in the copolymers. Also, the apparent thermal decomposition activation energies were calculated by the Ozawa method with a Shimadzu TGA 60H thermogravimetric analysis thermobalance. All of the products showed moderate activity against different strains of bacteria and fungi. The photochemical properties of the polymers were investigated by UV spectroscopy. © 2010 Wiley Periodicals, Inc. J Appl Polym Sci, 2010     

Discrete Element Modeling for fouled railroad ballast

Fouling refers to the condition of railroad ballast when voids in this unbound aggregate layer are filled with relatively finer materials or fouling agents commonly from the ballast aggregate breakdown, outside contamination such as coal dust from coal trains, or from subgrade soil intrusion. This paper aims to investigate the effect of fouling on ballast strength and stability. Fouling mechanism was first explained followed by investigation of mechanical properties of fouling agent. Coal dust was chosen as the fouling agent due to its poor mechanical properties and it had been reported to mostly decrease aggregate assembly strength comparing to other fouling agents. An image-aided Discrete Element Modeling (DEM) approach was introduced to simulate the coal dust fouled track field settlement performance. To that end, DEM model parameters for clean and coal dust fouled ballast were validated by matching the DEM direct shear box simulation results to the laboratory shear box testing results for both samples. By assigning laboratory calibrated model parameters to the “half-track” ballast sample generated in DEM, effects of different fouling percentage as well as different fouling locations on ballast settlement performance are studied. Results from the “half-track” DEM simulation revealed that fouling could lead to unfavorable track distresses such as “hanging tie”. Further, shoulder fouling scenario was proven to be critical in track maintenance.     

A Comparison of Linear with Nonlinear Viscoelastic Solutions for Shear Stress Concentration in Double Lap Joints

The correspondence principle based on the Maxwell model and a nonlinear viscoelastic solution involving an iterative scheme are used to describe the time dependent variation of the adhesive maximum shear stress in adhesively bonded double lap joints. The results indicate that if the correspondence principle is applied, the use of Maxwell chain is necessary to approximate the continuous change in the relaxation time and to coincide with the results calculated using the nonlinear viscoelastic theory.     

Plasma polymerization‐modified bacterial polyhydroxybutyrate nanofibrillar scaffolds

The design and the development of novel scaffold materials for tissue engineering have attracted much interest in recent years. Especially, the prepared nanofibrillar scaffold materials from biocompatible and biodegradable polymers by electrospinning are promising materials to be used in biomedical applications. In this study, we propose to produce low‐cost and cell‐friendly bacterial electrospun PHB polymeric scaffolds by using Alcaligenes eutrophus DSM 545 strain to PHB production. The produced PHB was characterized by Nuclear Magnetic Resonance (NMR) and Fourier Transform Infrared Spectroscopy (FTIR). Nanofibrous scaffolds were fabricated via electrospinning method that has a fiber diameter approximately 700–800 nm. To investigate cell attachment, cell growth, and antioxidant enzyme activity on positively and negatively charged PHB scaffold, PHB surface was modified by plasma polymerization technique using polyethylene glycol (PEG) and ethylenediamine (EDA). According to the results of superoxide dismutase (SOD) activity study, PEG‐modified nanofibrillar scaffolds indicated more cellular resistance against oxidative stress compared to the EDA modification. As can be seen in cell proliferation results, EDA modification enhanced the cell proliferation more than PEG modification, while PEG modification is better as compared with nonmodified scaffolds. In general, through plasma polymerization technique, surface modified nanofibrillar structures are effective substrates for cell attachment and outgrowth. © 2012 Wiley Periodicals, Inc. J. Appl. Polym. Sci., 2013     

Conduction Efficiency and Strength of Electronically Conductive Adhesive Joints

Electronically conductive adhesives are being considered as an alternative to solder for interconnection in microelectronics. In order to gain insight regarding electrical and mechanical performance properties of this class of adhesive interconnections, overlap joints were made. Joint resistance and mechanical bond strength were measured before and after environmental stressing.     

Seismic vulnerability, behavior and design of tunnel form building structures

Multi-story reinforced concrete tunnel form buildings are one of the common structural types in regions prone to high seismic risk due to the buildings inherent earthquake resistance and ease of construction. Despite their good performance during earthquakes in 1999 in Turkey, and abundance of such structures scattered worldwide, current seismic codes and design provisions provide insufficient guidelines for their seismic design. As a compensatory measure, a series of modal and nonlinear static analyses are conducted by emphasizing the characteristic dynamic behavior of tunnel form buildings including impacts of wall-to-wall and wall-to-slab interaction and effects of torsion and wall-openings on the load transfer mechanism and seismic performance. A new formula for explicit determination of their fundamental period is developed in addition to a recommended response reduction factor and reinforcement detailing around shear-wall openings.