Bifidobacterium carbohydrases-their role in breakdown and synthesis of (potential) prebiotics

There is an increasing interest to positively influence the human intestinal microbiota through the diet by the use of prebiotics and/or probiotics. It is anticipated that this will balance the microbial composition in the gastrointestinal tract in favor of health promoting genera such as Bifidobacterium and Lactobacillus. Carbohydrates like non-digestible oligosaccharides are potential prebiotics. To understand how these bacteria can grow on these carbon sources, knowledge of the carbohydrate-modifying enzymes is needed. Little is known about the carbohydrate-modifying enzymes of bifidobacteria. The genome sequence of Bifidobacterium adolescentis and Bifidobacterium longum biotype longum has been completed and it was observed that for B. longum biotype longum more than 8% of the annotated genes were involved in carbohydrate metabolism. In addition more sequence data of individual carbohydrases from other Bifidobacterium spp. became available. Besides the degradation of (potential) prebiotics by bifidobacterial glycoside hydrolases, we will focus in this review on the possibilities to produce new classes of non-digestible oligosaccharides by showing the presence and (transglycosylation) activity of the most important carbohydrate modifying enzymes in bifidobacteria. Approaches to use and improve carbohydrate-modifying enzymes in prebiotic design will be discussed.     

Towards a simple and safe Objective Caml compiling framework for the synchronous language SIGNAL

This paper presents a simple and safe compiler, called MinSIGNAL, from a subset of the synchronous dataflow language SIGNAL to C, as well as its existing enhancements. The compiler follows a modular architecture, and can be seen as a sequence of source-to-source transformations applied to an intermediate representation which is named Synchronous Clocked Guarded Actions (S-CGA) and translation to sequential imperative code. Objective Caml (OCaml) is used for the implementation of MinSIGNAL. As a modern functional language, OCaml is adapted to symbolic computation and so, particularly suitable for compiler design and implementation of formal analysis tools. In particular, the safety of its type checking allows to skip some verification that would be mandatory with other languages. Additionally, this work is a basis for the formal verification of the compilation of SIGNAL with a theorem prover such as Coq.     

Evaluating demand response opportunities for power systems resilience using MILP and MINLP Formulations

While peak shaving is commonly used to reduce power costs, chemical process facilities that can reduce power consumption on demand during emergencies (e.g., extreme weather events) bring additional value through improved resilience. For process facilities to effectively negotiate demand response (DR) contracts and make investment decisions regarding flexibility, they need to quantify their additional value to the grid. We present a grid-centric mixed-integer stochastic programming framework to determine the value of DR for improving grid resilience in place of capital investments that can be cost prohibitive for system operators. We formulate problems using both a linear approximation and a nonlinear alternating current power flow model. Our numerical results with both models demonstrate that DR can be used to reduce the capital investment necessary for resilience, increasing the value that chemical process facilities bring through DR. However, the linearized model often underestimates the amount of DR needed in our case studies. Published 2018. This article is a U.S. Government work and is in the public domain in the USA. AIChE J, 65: e16508, 2019     

Leukemia-Induced Cellular Senescence and Stemness Alterations in Mesenchymal Stem Cells Are Reversible upon Withdrawal of B-Cell Acute Lymphoblastic Leukemia Cells

Leukemic cell growth in the bone marrow (BM) induces a very stressful condition. Mesenchymal stem cells (MSC), a key component of this BM niche, are affected in several ways with unfavorable consequences on hematopoietic stem cells favoring leukemic cells. These alterations in MSC during B-cell acute lymphoblastic leukemia (B-ALL) have not been fully studied. In this work, we have compared the modifications that occur in an in vitro leukemic niche (LN) with those observed in MSC isolated from B-ALL patients. MSC in this LN niche showed features of a senescence process, i.e., altered morphology, increased senescence-associated β-Galactosidase (SA-βGAL) activity, and upregulation of p53 and p21 (without p16 expression), cell-cycle arrest, reduced clonogenicity, and some moderated changes in stemness properties. Importantly, almost all of these features were found in MSC isolated from B-ALL patients. These alterations rendered B-ALL cells susceptible to the chemotherapeutic agent dexamethasone. The senescent process seems to be transient since when leukemic cells are removed, normal MSC morphology is re-established, SA-βGAL expression is diminished, and MSC are capable of re-entering cell cycle. In addition, few cells showed low γH2AX phosphorylation that was reduced to basal levels upon cultivation. The reversibility of the senescent process in MSC must impinge important biological and clinical significance depending on cell interactions in the bone marrow at different stages of disease progression in B-ALL.     

The effect of sociodemographic diversity of residential customers on the financial risk experienced in the retail electricity market

The sociodemographic diversity of residential customers can affect the level of financial risk that an electricity provider experiences in the retail market. To demonstrate the relationship between sociodemographic diversity and financial risk, electricity consumption data drawn from the United Kingdom Power Networks ‘Low Carbon London’ project was analyzed to explore the relationship between sociodemographic diversity and financial risk experienced by electricity retailers. The results show that when increasing the sociodemographic diversity amongst a group of residential customers the effect on financial risk depends on the electricity consumption patterns of individual customers and the relationship of consumption patterns between residential customers. Increasing sociodemographic diversity amongst residential customers with very distinct energy consumption patterns can decrease the overall financial risk associated with the aggregated revenue received from these customers. However, the results showed that adding customers to a customer base without consideration for their sociodemographic background can cause the overall financial risk associated with the aggregated revenue received to change erratically. Whilst previous studies have considered customer diversity and its influence on peak electricity demand, this research advances the state-of-the-art by showing the importance of customer diversity to the financial quantity risk experienced by electricity retailers. This finding has serious implications for electricity providers seeking to mitigate financial risk in the retail electricity market.     

Modelling of solid formation by heterogeneous reactions through a multicomponent transport model of diluted ionic species: Simulation of barite fouling in a geothermal heat exchanger

A general model is proposed in order to describe the growth of a deposit by heterogeneous reactions. The hydrodynamics in the fluid is described by a multicomponent transport model for ionic species diluted in a solvent and heat transfer is taken into account in both liquid and solid domains. The boundary condition at the interface where the reaction takes place is described thoroughly. It involves the reaction kinetics and gives access to the velocity of the interface, ie, the mass rate of the solid deposit. The model is then applied to the case of barite crystallization in a heat exchanger. The liquid phase is therefore composed of two ionic species Ba²⁺ and SO₄²⁻ diluted in water. The solid phase is modelled as a homogeneous barite deposit. The fully dynamic CFD simulation of the model is made using Comsol Multiphysics, in a cylindrical pipe. The solid growth is analyzed over time and space in terms of the relevant variables of the model.     

一种同步语言多线程代码自动生成工具

随着安全关键系统对计算性能要求的日趋提高,能够提供更强计算能力而又减少电子设备的体积、重量和功耗的多核处理器将在安全关键领域得到广泛应用.同步语言能够表达确定性并发行为且具有精确时间语义等特性,适用于安全关键软件的建模和验证.目前,同步语言SIGNAL编译器主要支持串行代码生成,较少关注多线程代码生成.提出一种同步语言SIGNAL多线程代码生成工具.首先将SIGNAL程序转换为经过时钟演算的S-CGA中间程序;之后将S-CGA中间程序转换为时钟数据依赖图以分析依赖关系;然后对时钟数据依赖图进行拓扑排序划分,并针对划分结果提出优化算法和基于流水线方式的任务划分方法;最后将划分结果转换为虚拟多线程结构并进一步生成可执行多线程C/Java代码.通过在多核处理器上的实验,验证了所提方法的有效性.     

Stack-and-Draw Applied to the Engineering of Multi-Material Fibers with Non-Cylindrical Profiles

Here, it is demonstrated that the stack-and-draw approach can be expanded to unusual materials association and profile geometries to generate fiber assemblies with unprecedented functionalities. This approach relies on the stacking of flat oxide glass slides into a preform, which is then thermally elongated into tens-of-meters-long ribbon fibers with preserved cross-section ratio. Fabrication methodology is introduced. In order to illustrate the versatility of the method, a panel of fibers with diverse geometries and functions is exposed, including glass-only exposed-core fibers for chemical sensing and, upon the insertion of metal electrodes, H-shaped multi-cavity structures and compact, glass-metal fiber optical detectors applied to a gas analysis by means of fiber-tip plasma spectroscopy. It is believed this new approach will offer an attractive, straightforward solution for designing innovative, complex multimaterial fiber platforms with enhanced functionalities.     

Screening of plant species for the phytotreatment of wastewater containing sulphonated anthraquinones

Sulphonated anthraquinones are known to be recalcitrant to biodegradation and are not eliminated by traditional wastewater treatment plants, leading to their accumulation in fresh water. Due to the high cost and limited efficiency of existing physical-chemical treatments, alternative cheaper processes are required to remove these compounds from industrial effluents. Four plant species were tested under hydroponic conditions for their ability to treat model effluents contaminated with mono- and disulphonated anthraquinones. Among them, Rheum rabarbarum (rhubarb) showed the most promising results and was chosen for further investigation. The apparent transpiration stream concentration factor obtained with this plant species reached up to 2.5, indicating a strong phytotreatment potential that should be further explored then exploited.