The role of environmental context in mapping invasive plants with hyperspectral image data

Lepidium latifolium (perennial pepperweed) is a noxious Eurasian weed invading riparian and wetland areas of the western US. Effective management of Lepidium requires detailed, accurate maps of its distribution, as may be provided by remote sensing, to contain existing infestations and eradicate incipient populations. We mapped Lepidium with 3 m spatial resolution, 128-band HyMap image data in three sites of California's San Francisco Bay/Sacramento–San Joaquin Delta Estuary (Rush Ranch in Suisun Marsh and the Greater Jepson Prairie Ecosystem and the Cosumnes River Preserve in the Delta). These sites are markedly different in terms of hydrology, salinity, species composition, and structural and landscape diversity. Aggregated classification and regression tree models (CART), incorporating the results of mixture tuned matched filter (MTMF) analyses and spectral physiological indexes, were used to map Lepidium at the three sites. This approach was sufficiently flexible and robust to detect Lepidium with similar accuracies (~ 90%) at both Rush Ranch and Jepson Prairie, but was unsuccessful at Cosumnes River Preserve. Comparisons of the behavior of the MTMFs and the CARTs between sites reveal the importance of environmental context in species mapping. Rush Ranch presents the simplest conditions for mapping Lepidium: it is the wettest and least diverse site and Lepidium is spectrally distinct from co-occurring species. At Jepson Prairie, several co-occurring species closely resemble Lepidium spectrally. Nevertheless, hyperspectral data provide sufficient spectral detail to resolve Lepidium even at this challenging site, which is facilitated by phenological separation from the matrix of annual grasses. At Cosumnes River Preserve, however, Lepidium is neither spectrally nor phenologically distinct, and consequently could not be mapped successfully. Evidence suggests that the success of a remote sensing analysis declines as site complexity increases (species, structural, and landscape diversity; spectral variability; etc.), although this relationship is complex, indirect, and may be phenology-dependent.     

Representation and selection of relative position.

Part 1 concerns representation: Pop-out for a target that can be distinguished from the distractors only by the relative position of its components was demonstrated, thereby showing that simple shape information is represented preattentively. Findings are discussed in terms of early- vs late-selection debate and in terms of theories of search and texture segregation. Part 2 concerns selection: Strong learning in a varied-mapping paradigm was demonstrated, and it was shown that preattentive shape information can be used for selection. Finally, an account of the learning, namely the group scale hypothesis, is suggested and a final experiment to test it is presented. Results confirm and extend the emphasis placed by J. Duncan and G. W. Humphreys's (1989) attentional engagement theory on grouping processes in visual search. (PsycINFO Database Record (c) 2010 APA, all rights reserved)     

Benzylation of thiophene using zinc and iron chloride modified montmorillinite clay

Montmorillinite clays, modified with either Zn(II) or Fe(III) chlorides have been used to catalyze the Friedel-Crafts alkylation of thiophene. High yields (ca. 80%) of 2- and 3-benzylthiophene mixtures were obtained using either catalyst in chlorobenzene or nitrobenzene solvent at 80°C. The ratio of 2–3-products was found to be controlled by their relative stability. Reactions were most rapid in nitrobenzene solution (<5 min) and resulted in formation of the 2-isomer as the only mono-substituted product. This is believed to be the first example in which an alkylation of thiophene has been limited to one regio-isomer.     

Multimerization behaviour of single chain Fv variants for the tumour-binding antibody B72.3

A systematic study has been performed on the relationship betweenlinker length, relative orientation of variable domains, multimerizationbehaviour and antigen binding activity for single chain Fvs(scFvs) of the tumour-binding antibody B72.3. Thirteen scFvvariants with linkers comprising up to six repeats of the motifGly-Gly-Gry-Gly-Ser were studied. All these scFvs showed a tendencyto form dimers or higher molecular weight species, and thistendency decreased with increasing linker length. The dimersand higher molecular weight forms may arise from head to tailintermolecular association of V_H and V_L domains. For each linkerlength, scFvs with the organization VL-linker-VH showed greaterbinding activity than those with the organization VH-linker-VL.In fact, for the latter organization only the variant with a30 amino acid linker showed good binding activity, suggestingthat (0 for B72.3 the C-tenninus of VH or the N-tenninus ofVL makes a structural contribution to antigen binding, and (ii)shorter linkers interfere with this contribution. Antigen bindingstudies on scFvs should be interpreted with caution becauseof their tendency to multlmerize. Such multimerization can beminimized by using linkers longer than those in common use     

Post-traumatic stress disorder and smoking: a systematic review.

We conducted a systematic review of what is known about the relationship between post-traumatic stress disorder (PTSD) and smoking to guide research on underlying mechanisms and to facilitate the development of evidence-based tobacco treatments for this population of smokers. We searched Medline, PsychINFO, and the Cochrane Central Register of Controlled Trials and identified 45 studies for review that presented primary data on PTSD and smoking. Smoking rates were high among clinical samples with PTSD (40%-86%) as well as nonclinical populations with PTSD (34%-61%). Most studies showed a positive relationship between PTSD and smoking and nicotine dependence, with odds ratios ranging between 2.04 and 4.52. Findings also suggest that PTSD, rather than trauma exposure itself, is more influential for increasing risk of smoking. A small but growing literature has examined psychological factors related to smoking initiation and maintenance and the overlapping neurobiology of PTSD and nicotine dependence. Observational studies indicate that smokers with PTSD have lower quit rates than do smokers without PTSD. Yet a few tobacco cessation treatment trials in smokers with PTSD have achieved quit rates comparable with controlled trials of smokers without mental disorders. In conclusion, the evidence points to a causal relationship between PTSD and smoking that may be bidirectional. Specific PTSD symptoms may contribute to smoking and disrupt cessation attempts. Intervention studies that test behavioral and pharmacological interventions designed specifically for use in patients with PTSD are needed to reduce morbidity and mortality in this population.     

6-Phospho-{beta}-galactosidases of Gram-positive and 6-phospho-{beta}-glucosidase B of Gram-negative bacteria: comparison of structure and function by kinetic and immunological methods and mutagenesis of the lacG gene of staphylococcus aureus

The 6-phospho-ß-galactosidase of Staphylococcus aureus,Lactococcus lactis and Lactobacillus casei and 6-phospho-ßglucosidaseB of Escherichia coli build a subfamily inside a greater enzymefamily, named the glycosal hydrolase family 1, which, hi addition,contains nine ß-glycosidases of different origins.Kinetic and immunological evidence is provided in this reportwhich strengthens the relationship of the four 6-phospho-ß-glycosidases.It is shown that the 6-phospho-ß-galactosidases and6-phospho-ß-glucosidase B are able to split aromaticß-galactoside phosphates and ß-glucosidephosphates. The turnover numbers of hydrolysis of substrateswith different epimerization at C-4 of the glycon vary up to15-fold only. Two polydonal antisera, one derived against thenative 6-phospho-ß-galactosidase from S.aureus andthe other derived against the 6-phospho-ß-glucosidaseB, cross-reacted with both enzymes. Peptides of the proteinswere separated by reverse phase HPLC. The cross-reacting peptideswere sequenced and shown to be localized at almost the sameposition in the aligned primary structures of both enzymes.An insertion of nine amino adds near these antigenic domainsis unique for the 6-phospho-ß-glycosidases and missingwithin the sequences of the ß-glycoside-specific membersof the family. The lacG gene of a 6-phospho-ß-galactosidasenegative S.aureus mutant was doned into E.coli and sequenced.In the totally inactive mutant protein only the glycine at position332 was changed to an arginine. This amino acid is part of thesequence insertion near the antigenic domain reacting with bothantisera. These data support the assumption that the regionis of great importance for the function of the enzymes and thatit is possible it determines the specificity of the phosphorylatedform of the substrates. In addition, the 6-phospho-ß-galactosidaseof S.aureus was modified by sitedirected mutagenesis of thecorresponding lacG gene hi order to replace residues Glul60and Glu375, which were suspected of being involved hi the generalacid catalysis of substrate hydrolysis, with glutamine residues.The mutant protein 160EQ retained some catalytic activity whilethe protein 375EQ was totally inactive. Glu375 is the activesite nudeophile of the 6-phospho-ß-galactosidase ofS.aureus. It is located in the sequence motif ENG where Glu358was identified as the catalytkally active nudeophile hi theß-glucosidase of Agrobacterium.     

Reengineering the Internet for Better Security

The growing proliferation of malware is raising doubts about the Internet's future. Security measures primarily target inbound traffic, but service providers have no incentive to stop attacks and spam at the source. A proposed certification scheme motivates providers to control outgoing traffic, efficiently increasing overall security while preserving the Internet's open, decentralized structure     

Turnover rates for heptane reforming over Pt/L zeolites with different alkali cations

A series of 0.6 wt% Pt/BaL catalysts with different alkali cations have been tested for heptane reforming at 440 ° C, 0.16 atm heptane, 0.95 atm H₂, 6.7 atm He, 3 to 5 h of reaction, and conversions between 2 and 10%. As the cations in the zeolite are progressively changed from lithium to cesium, the turnover rates for hydrogenolysis and dehydrocyclization increase by about 5–10 times, while the turnover rate for isomerization remains unchanged. Since the turnover rates for hydrogenolysis and dehydrocyclization are similarly affected, exchanging lighter alkali cations for heavier ones increases the aromatics selectivity by a small amount, from 72 to 82%. These results indicate that metal-support interactions have a moderate effect on the heptane reforming activity, but only a weak effect on the selectivity.