Probabilistic learning on manifolds (PLoM) with partition

The probabilistic learning on manifolds (PLoM) introduced in 2016 has solved difficult supervised problems for the “small data” limit where the number N of points in the training set is small. Many extensions have since been proposed, making it possible to deal with increasingly complex cases. However, the performance limit has been observed and explained for applications for which N is very small and for which the dimension of the diffusion-map basis is close to N. For these cases, we propose a novel extension based on the introduction of a partition in independent random vectors. We take advantage of this development to present improvements of the PLoM such as a simplified algorithm for constructing the diffusion-map basis and a new mathematical result for quantifying the concentration of the probability measure in terms of a probability upper bound. The analysis of the efficiency of this extension is presented through two applications.     

Thermal shock effects on the impact resistance,tolerance and flexural strength of alumina based oxide/oxide ceramic matrix composites

In this study the effects of thermal shock on the impact damage resistance, damage tolerance and flexural strength of Nextel 610/alumina silicate ceramic matrix composites were experimentally evaluated. Composite laminates with balanced and symmetric layup were gradually heated to 1200°C in an air-based furnace and held for at least 30 min before being removed and immersed in water at room temperature. The laminates were then subjected to low velocity impacts via a hemispherical steel impactor. The resultant damage was characterized non-destructively, following which the laminates were subjected to compression tests. Three-point bend tests were also performed to evaluate the effect of thermal shock on the flexural strength and related failure modes of the laminates. Thermally shocked laminates showed smaller internal damage and larger external damage areas in comparison to their pristine counterparts. For the impact energy and resultant damage size considered, the residual compressive strengths for the thermally shocked and pristine laminates were similar.     

In Vivo Simultaneous Analysis of Gene Expression by Dual-Color Luciferases in Caenorhabditis elegans

Both fluorescent and luminescent observation are widely used to examine real-time gene expression patterns in living organisms. Several fluuorescent and luminescent proteins with specific optical properties have been developed and applied for simultaneous, multi-color observation of more than two gene expression profiles. Compared to fluorescent proteins, however, the application of multi-color luminescent imaging in living organisms is still limited. In this study, we introduced two-color luciferases into the soil nematode C. elegans and performed simultaneous analysis of two gene expression profiles. Using a green-emitting luciferase Eluc (emerald luciferase) and red-emitting luciferase SLR (stable luciferase red), the expression patterns of two genes were simultaneously observed in single animals from embryonic to adult stages over its whole life span. In addition, dual gene activities were observed at the single embryo level, with the simultaneous observation of morphological changes. These are the first application of a two-color luciferase system into a whole animal and suggest that precise relationship of expression patterns of multiple genes of interest can be analyzed over the whole life of the animal, dependent on the changes in genetic and/or environmental conditions.     

Various density light field image coding based on distortion minimization interpolation

In recent years, the light field (LF) as a new imaging modality has attracted wide interest. The large data volume of LF images poses great challenge to LF image coding, and the LF images captured by different devices show significant differences in angular domain. In this paper we propose a view prediction framework to handle LF image coding with various sampling density. All LF images are represented as view arrays. We first partition the views into reference view (RV) set and intermediate view (IV) set. The RVs are rearranged into a pseudo sequence and directly compressed by a video encoder. Other views are then predicted by the RVs. To exploit the four dimensional signal structure, we propose the linear approximation prior (LAP) to reveal the correlation among LF views and efficiently remove the LF data redundancy. Based on the LAP, a distortion minimization interpolation (DMI) method is used to predict IVs. To robustly handle the LF images with different sampling density, we propose an Iteratively Updating depth image based rendering (IU-DIBR) method to extend our DMI. Some auxiliary views are generated to cover the target region and then the DMI calculates reconstruction coefficients for the IVs. Different view partition patterns are also explored. Extensive experiments on different types LF images also valid the efficiency of the proposed method.     

Use of Fourier-Transform Infrared Spectroscopy (FT-IR) for Monitoring Experimental Helicobacter pylori Infection and Related Inflammatory Response in Guinea Pig Model

Infections due to Gram-negative bacteria Helicobacter pylori may result in humans having gastritis, gastric or duodenal ulcer, and even gastric cancer. Investigation of quantitative changes of soluble biomarkers, correlating with H. pylori infection, is a promising tool for monitoring the course of infection and inflammatory response. The aim of this study was to determine, using an experimental model of H. pylori infection in guinea pigs, the specific characteristics of infrared spectra (IR) of sera from H. pylori infected (40) vs. uninfected (20) guinea pigs. The H. pylori status was confirmed by histological, molecular, and serological examination. The IR spectra were measured using a Fourier-transform (FT)-IR spectrometer Spectrum 400 (PerkinElmer) within the range of wavenumbers 3000–750 cm⁻¹ and converted to first derivative spectra. Ten wavenumbers correlated with H. pylori infection, based on the chi-square test, were selected for a K-nearest neighbors (k-NN) algorithm. The wavenumbers correlating with infection were identified in the W2 and W3 windows associated mainly with proteins and in the W4 window related to nucleic acids and hydrocarbons. The k-NN for detection of H. pylori infection has been developed based on chemometric data. Using this model, animals were classified as infected with H. pylori with 100% specificity and 97% sensitivity. To summarize, the IR spectroscopy and k-NN algorithm are useful for monitoring experimental H. pylori infection and related inflammatory response in guinea pig model and may be considered for application in humans.     

AP2M1 Supports TGF-β Signals to Promote Collagen Expression by Inhibiting Caveolin Expression

The extracellular matrix (ECM) is important for normal development and disease states, including inflammation and fibrosis. To understand the complex regulation of ECM, we performed a suppressor screening using Caenorhabditis elegans expressing the mutant ROL-6 collagen protein. One cuticle mutant has a mutation in dpy-23 that encodes the μ2 adaptin (AP2M1) of clathrin-associated protein complex II (AP-2). The subsequent suppressor screening for dpy-23 revealed the lon-2 mutation. LON-2 functions to regulate body size through negative regulation of the tumor growth factor-beta (TGF-β) signaling pathway responsible for ECM production. RNA-seq analysis showed a dominant change in the expression of collagen genes and cuticle components. We noted an increase in the cav-1 gene encoding caveolin-1, which functions in clathrin-independent endocytosis. By knockdown of cav-1, the reduced TGF-β signal was significantly restored in the dpy-23 mutant. In conclusion, the dpy-23 mutation upregulated cav-1 expression in the hypodermis, and increased CAV-1 resulted in a decrease of TβRI. Finally, the reduction of collagen expression including rol-6 by the reduced TGF-β signal influenced the cuticle formation of the dpy-23 mutant. These findings could help us to understand the complex process of ECM regulation in organism development and disease conditions.     

Cryptographic Lightweight Encryption Algorithm with Dimensionality Reduction in Edge Computing

Edge Computing is one of the radically evolving systems through generations as it is able to effectively meet the data saving standards of consumers, providers and the workers. Requisition for Edge Computing based items have been increasing tremendously. Apart from the advantages it holds, there remain lots of objections and restrictions, which hinders it from accomplishing the need of consumers all around the world. Some of the limitations are constraints on computing and hardware, functions and accessibility, remote administration and connectivity. There is also a backlog in security due to its inability to create a trust between devices involved in encryption and decryption. This is because security of data greatly depends upon faster encryption and decryption in order to transfer it. In addition, its devices are considerably exposed to side channel attacks, including Power Analysis attacks that are capable of overturning the process. Constrained space and the ability of it is one of the most challenging tasks. To prevail over from this issue we are proposing a Cryptographic Lightweight Encryption Algorithm with Dimensionality Reduction in Edge Computing. The t-Distributed Stochastic Neighbor Embedding is one of the efficient dimensionality reduction technique that greatly decreases the size of the non-linear data. The three dimensional image data obtained from the system, which are connected with it, are dimensionally reduced, and then lightweight encryption algorithm is employed. Hence, the security backlog can be solved effectively using this method.