Using Web resources to construct multilingual medical thesaurus for cross-language medical information retrieval

Due to the language barrier, non-English users are unable to retrieve the most updated medical information from the U.S. authoritative medical websites, such as PubMed and MedlinePlus. However, currently, there is no any cross-language medical information retrieval (CLMIR) system that can help Chinese-speaking consumers cross the language barrier in finding useful English medical information. A few CLMIR systems utilize MeSH (Medical Subject Headings) to help overcome the language barrier. Unfortunately, the traditional Chinese version of MeSH is currently unavailable.In this paper, we employ a semi-automatic term translation method to construct a Chinese–English MeSH by exploiting abundant multilingual Web resources, including Web anchor texts and search–result pages. Through this method, we have developed a Chinese–English Mesh Compilation System to assist knowledge engineers in compiling a Chinese–English medical thesaurus with more than 19,000 entries. Furthermore, this thesaurus has been used to develop a prototypical system for cross-language medical information retrieval, MMODE, which can help consumers retrieve top-quality English medical information using Chinese terms.     

Residue–Residue Interaction Prediction via Stacked Meta-Learning

Protein–protein interactions (PPIs) are the basis of most biological functions determined by residue–residue interactions (RRIs). Predicting residue pairs responsible for the interaction is crucial for understanding the cause of a disease and drug design. Computational approaches that considered inexpensive and faster solutions for RRI prediction have been widely used to predict protein interfaces for further analysis. This study presents RRI-Meta, an ensemble meta-learning-based method for RRI prediction. Its hierarchical learning structure comprises four base classifiers and one meta-classifier to integrate predictive strengths from different classifiers. It considers multiple feature types, including sequence-, structure-, and neighbor-based features, for characterizing other properties of a residue interaction environment to better distinguish between noninteracting and interacting residues. We conducted the same experiments using the same data as previously reported in the literature to demonstrate RRI-Meta’s performance. Experimental results show that RRI-Meta is superior to several current prediction tools. Additionally, to analyze the factors that affect the performance of RRI-Meta, we conducted a comparative case study using different protein complexes.