Mechanisms of tubulin modification by phosphatidylcholine hydroperoxides

The interaction of lipid peroxides with cellular proteins has been postulated to contribute to cellular aging. A potential target for such effects is tubulin, the building block of microtubules. We examined the concentration-dependent effects of phosphatidylcholine hydroperoxides on the ability of tubulin to polymerize into microtubules. The results demonstrated that even very low concentrations of peroxides were sufficient to interfere with the tubulin and, therefore, the microtubule function. Decreased tubulin activity (as measured by tubulin GTPase activity) showed correlation with the modification of methionine and cysteine in tubulin and a change in the tubulin conformational state as indicated by fluorescence and ultraviolet spectroscopic measurements. As no effect on electric conductivity was observed, indicating that modulation of ionic binding was not involved, the interaction mechanism may be a hydrophobic one.     

Computer-generated Conversation Using Newspaper Headline

In this paper, the authors propose a method that incorporates mechanisms for handling ambiguity in speech and the ability of humans to create associations, and for formulating conversations based on rule base knowledge and common knowledge. Go beyond the level that can be achieved, using only conventional natural language processing and vast repositories of sample patterns. In this paper, the authors propose a method for computer conversation sentences generated using newspaper headlines as an example of how the common knowledge and associative ability are applied.     

Cover Image,Volume 97, Issue 8

The cover image, by Yuko Shimamura et al, is based on the Research Article Inhibitory effects of Japanese horseradish (Wasabia japonica) on the formation and genotoxicity of a potent carcinogen, acrylamide, DOI: 10.1002/jsfa.8055 .

     

Electroreductive block copolymerization of dichlorosilanes in the presence of disilane additives

The electroreductive polymerization of dichloromethylphenylsilane in the presence of triphenylsilyl group‐containing disilanes such as hexaphenyldisilane followed by the electroreductive termination with chlorotriphenylsilane afforded triphenylsilyl group‐terminated polymethylphenylsilane in 15–32% yield. The isolated polymethylphenylsilane (M_n = 3350 g mol^?1, M_w/M_n = 1.4) was found to react as a macroinitiator to copolymerize with dibutyldichlorosilane under electroreductive conditions producing the corresponding block copolymer (M_n = 4730 g mol^?1, M_w/M_n = 1.2) in 38% yield. The ratio of monomer units (? MeSiPh? to? BuSiBu? ) of the copolymer was determined to be 75:25 using ¹H NMR analysis, which was in good agreement with the calculated ratio (74:26) on the assumption that molecular weight of the macroinitiator was not changed. The block structure of the resulting copolymer, poly(methylphenylsilane)‐block‐poly(dibutylsilane), was also confirmed by comparing its ¹H NMR and UV absorption spectra with those of polymethylphenylsilane, polydibutylsilane and a statistical copolymer prepared by electroreductive polymerization of dichloromethylphenylsilane with dibutyldichlorosilane. This method is applicable to the preparation of other types of macroinitiator such as triphenylsilyl group‐terminated polydibutylsilane, and polydibutylsilane‐block‐polymethylphenylsilane was also obtained using this macroinitiator. Copyright © 2011 Society of Chemical Industry     

Application of positron annihilation line-shape analysis to fatigue damage for nuclear plant materials

Positron annihilation line-shape analysis is sufficiently sensitive to detect microstructural defects such as vacancies and dislocations. We are developing a portable positron annihilation system and applying this technique to fatigue damage in type 316 stainless steel and SA508 low alloy steel. The positron annihilation technique was found to be sensitive in the early fatigue life, i.e. up to 10% of the fatigue life, but showed little sensitivity in later stages of the fatigue life in type 316 stainless steel and SA508 low alloy steel. Type 316 stainless steel a higher positron annihilation sensitivity than that of SA508. It was considered that the amount of dislocation density change in the stainless steel was greater than that in the low alloy steel, because the initial microstructure contained a low dislocation density because of the solution heat treatment for the type 316 stainless steel.     

Ozonation of cholesterol in the presence of ethanol: Identification of a cytotoxic ethoxyhydroperoxide molecule

Cholesterol ozonation was carried out in ethanol-containing aqueous or nonaqueous solvent, and the ozonized products were analyzed by chemiluminescence detection-HPLC with on-line electrospray MS (HPLC-CL-MS) and characterized on the basis of NMR and FABMS. After the ozonolysis of cholesterol in water/ethanol (aqueous system) as well as in chloroform/ethanol (nonaqueous system), a unique ethoxyhydroperoxide molecule (7α-ethoxy-3β-hydroxy-5α-B-homo-6-oxacholestane-5-hydroperoxide, termed “7α-ethoxy-5-OOH”) appeared as main ozonation product. In addition to structural analysis, we confirmed the remarkable cytotoxicity of 7α-ethoxy-5-OOH toward human lung adenocarcinoma A549 cells and found that its cytotoxicity is superior to that of the commonly known autoxidized cholesterol (3β-hydroxycholest-5-ene-7-one). Hence, 7α-ethoxy-5-OOH is a toxic molecule of primary importance, arising during cholesterol ozonation in the presence of ethanol.     

A modified method for the estimation of total carbonyl compounds in heated and frying oils using 2-propanol as a solvent

A modified method without using benzene for quantitative determination of total carbonyl compounds in heated and frying fats and oils has been developed. The analysis is done by the reaction of 2,4-dinitrophenylhydrazine (2,4-DNP) with aldehydes and ketones in 2-propanol. The optimal wavelength to determine the total carbonyl compounds is 420 nm where the 2,4-dinitrophenylhydrazone (2,4-DNPH) derivatives from saturated and unsaturated aldehydes and ketones had the same molar absorption coefficient. The modified method for the estimation of total carbonyl compounds in heated and frying oils using 2-propanol instead of benzene as a solvent had a good correlation with the conventional method.     

A cause of self‐similarity in TCP traffic

We analyse the statistical properties of aggregated traffic flows generated by TCP, in order to clarify a possible cause of self‐similarity in Internet traffic. Using ns‐2 simulation, we first show that aggregated traffic flows by TCP can be characterized by phase transition phenomena between non‐congested and congested phases in statistical physics. Interestingly, although the traffic exhibits self‐similarity with the Hurst parameter H ≈ 1.0 at the critical point between them, it is close to Poissonian away from the critical point. This result is consistent with results from real WAN traffic measurement. The main contribution of our work is to show that TCP itself contains a mechanism for generating self‐similarity, without assuming self‐similarity or long‐range dependency (LRD) in the application layer (e.g. packet inter‐arrival, connection arrival, and file size distribution). Moreover, we find that the value of the Hurst parameter at the critical point is determined by the simple feedback control called stop‐and‐wait flow control. Namely, it appears even without any packet retransmission events and is independent of the explicit rate increment algorithm such as slow‐start and congestion avoidance. Additionally, we demonstrate that the value of the Hurst parameter at the critical point depends on the constant bit rate algorithm and topology of network. Finally, we indicate that the time series of the round trip time follow the same statistics at the critical state. Copyright © 2005 John Wiley & Sons, Ltd.     

Role of the backbone conformation at position 7 in the structure and activity of marinostatin, an ester-linked serine protease inhibitor

Rational design of inhibitors: The cis-amide backbone at position 7 in the serine protease inhibitor marinostatin was replaced with an E or Z olefin. The E olefin analogue was not active, but the Z analogue was. The cis conformation might play a critical role in organizing a canonical structure for binding to proteases.