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Stability Is Not Everything: The Case of the Cyclisation of a Thrombin-Binding Aptamer
Authors:Dr Claudia Riccardi  Dr Albert Meyer  Dr Jean-Jacques Vasseur  Dr Irene Russo?Krauss  Prof Luigi Paduano  Dr Rosario Oliva  Prof Luigi Petraccone  Dr François Morvan  Prof Daniela Montesarchio
Affiliation:1. Department of Chemical Sciences, University of Naples Federico II, Via Cintia 21, 80126 Napoli, Italy;2. Institut des Biomolécules Max Mousseron, UMR 5247, CNRS, ENSCM, University of Montpellier, Place E. Bataillon, 34095 Montpellier Cedex 5, France
Abstract:With the aim of developing a new approach to obtain improved aptamers, a cyclic thrombin-binding aptamer (TBA) analogue (cycTBA) has been prepared by exploiting a copper(I)-assisted azide–alkyne cycloaddition. The markedly increased serum resistance and exceptional thermal stability of the G-quadruplex versus TBA were associated with halved thrombin inhibition, which suggested that some flexibility in the TBA structure was necessary for protein recognition.
Keywords:aptamers  click chemistry  cyclization  G-quadruplexes  molecular recognition
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