RLadyBug—An R package for stochastic epidemic models |
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Authors: | Michael Höhle Ulrike Feldmann |
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Affiliation: | Department of Statistics, University of Munich, Ludwigstr. 33, 80539 Munich, Germany |
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Abstract: | RLadyBug is an S4 package for the simulation, visualization and estimation of stochastic epidemic models in R. Maximum likelihood and Bayesian inference can be performed to estimate the parameters in a susceptible-exposed-infectious-recovered (SEIR) model, which is a stochastic model for describing a single outbreak of an infectious disease. The package is thus one step towards statistical software supporting parameter estimation, calculation of confidence intervals and hypothesis testing for transmission models. |
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Keywords: | SIR model SEIR model Stochastic modelling MCMC S4 R |
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