纳米金和磁性纳米颗粒在生物传感器中的应用

纳米技术的出现为纳米材料在分析化学领域的发展和应用开辟了新的方向。纳米材料的优异性能例如比表面积大、反应活性高等为生物检测奠定了基础。综述了纳米材料中纳米金和磁性纳米颗粒在生物传感器中的应用,并对其将来的发展进行了展望。     

金纳米粒子的研究进展

纳米科学是一个正在蓬勃发展的学科,它的发展对其他科学领域都有重要的影响,其中有一大领域的纳米粒子已经近被人们广泛研究,金纳米粒子就是其中较为典型的一个代表。它在生物标记、传感器构建、光学探针、电化学探针、组织修复、DNA、葡萄糖传感器等领域都有重要应用。     

Properties of Soy Protein Produced by Countercurrent,Two-Stage,Enzyme-Assisted Aqueous Extraction

Enzyme-assisted aqueous extraction processing (EAEP) is an environmentally friendly technology where oil and protein can be simultaneously extracted from soybeans by using water and protease. Countercurrent, two-stage, EAEP was performed at a 1:6 solids-to-liquid ratio, 50 °C, pH 9.0, and 120 rpm for 1 h to extract oil and protein from soybeans. The skim fractions were produced by three methods: (1) by treating with 0.5 % protease (wt/g extruded flakes) in both extraction stages; (2) by treating with 0.5 % protease in the 2nd extraction stage only; and (3) by using the same two-stage extraction procedure without enzymes in either extraction stages. Countercurrent, two-stage, protein extraction of air-desolventized, hexane-defatted, soybean flakes was used as a control. Solubility profiles of the skim proteins were the typical U-shaped curves with the lowest solubility at the isoelectric point of soy protein (pH 4.5). The use of the enzyme slightly improved solubility of the recovered protein with hydrolyzed proteins having higher solubilities at acid pH. Emulsification and foaming properties were generally reduced by the use of enzyme during EAEP extractions. The skims produced with protease-extracted (hydrolyzed) proteins gave gels with lower hardness than did unhydrolyzed proteins when heated at 80 °C. The essential amino acid compositions and protein digestibilities were not adversely affected by either extrusion or extraction treatments.     

Enzyme-Assisted Aqueous Extraction of Oil and Protein from Soybeans and Cream De-emulsification

The effects of two commercial endoproteases (Protex 6L and Protex 7L, Genencor Division of Danisco, Rochester, NY, USA) on the oil and protein extraction yields from extruded soybean flakes during enzyme-assisted aqueous extraction processing (EAEP) were evaluated. Oil and protein were distributed in three fractions generated by the EAEP: cream + free oil, skim and insolubles. Protex 6L was more effective for extracting free oil, protein and total solids than Protex 7L. Oil and protein extraction yields of 96 and 85%, respectively, were obtained using 0.5% Protex 6L. Enzymatic and pH treatments were evaluated to de-emulsify the oil-rich cream. Cream de-emulsification generated three fractions: free oil, an intermediate residual cream layer and an oil-lean second skim. Total cream de-emulsification was obtained when using 2.5% Protex 6L and pH 4.5. The extrusion treatment was particularly important for reducing trypsin inhibitor activity (TIA) in the protein-rich skim fraction. TIA reductions of 69 and 45% were obtained for EAEP skim (the predominant protein fraction) from extruded flakes and ground flakes, respectively. Protex 6L gave higher degrees of protein hydrolysis (most of the polypeptides being between 1,000 and 10,000 Da) than Protex 7L. Raffinose was not detected in the skim, while stachyose was eliminated by α-galactosidase treatment.     

Two-Stage Countercurrent Enzyme-Assisted Aqueous Extraction Processing of Oil and Protein from Soybeans

Enzyme-assisted aqueous extraction processing (EAEP) is an increasingly viable alternative to hexane extraction of soybean oil. Although considered an environmentally friendly technology where edible oil and protein can be simultaneously recovered, this process employs much water and produces a significant amount of protein-rich aqueous effluent (skim). In standard EAEP, highest oil, protein and solids yields are achieved with a single extraction stage using 1:10 solids-to-liquid ratio (extruded flakes/water), 0.5% protease (wt/g extruded flakes), pH 9.0, and 50 °C for 1 h. To reduce the amount of water used, two-stage countercurrent EAEP was evaluated for extracting oil, protein and solids from soybeans using a solids-to-liquid ratio of 1:5–1:6 (extruded flakes/water). Two-stage countercurrent EAEP achieved higher oil, protein and solids extraction yields than using standard EAEP with only one-half the usual amount of water. Oil, protein and solids yields up to 98 and 96%, 92 and 87%, and 80 and 77% were obtained when using two-stage countercurrent EAEP (1:5–1:6) and standard single-stage EAEP (1:10), respectively. Recycling the second skim obtained in two-stage countercurrent EAEP enabled reuse of the enzyme, with or without inactivation, in the first extraction stage producing protein with different degrees of hydrolysis and the same extraction efficiency. Slightly higher oil, protein and solids extraction yields were obtained using unheated skim compared to heated skim. These advances make the two-stage countercurrent EAEP attractive as the front-end of a soybean biorefinery.     

Protein Extraction and Membrane Recovery in Enzyme-Assisted Aqueous Extraction Processing of Soybeans

Enzyme-assisted aqueous extraction processing (EAEP) is an environmentally friendly process in which oil and protein can be simultaneously recovered from soybeans by using water and enzymes. The significant amount of protein-rich effluent (skim) constitutes a challenge to protein recovery. Countercurrent two-stage EAEP at a 1:6 solids-to-liquid ratio, 50 °C, pH 9.0, and 120 rpm for 1 h was used to extract oil and protein from dehulled, flaked and extruded soybeans. Different enzyme use strategies were used to produce different skim fractions: 0.5% protease (wt/wt extruded flakes) in both extraction stages; 0.5% protease only in the 2nd extraction stage; and no enzyme in either stage. Dead-end, stirred-cell membrane filtration was evaluated with each skim. About 96, 89, and 66% of the protein were extracted with the three enzyme treatments, respectively. Protein retentate yields of 91, 96, and 99% were obtained for the three enzyme treatments, respectively, by using double membrane filtration (30 kDa/500 Da) of the skims, achieving permeate fluxes up to 1.24 kg/m² h at 3.9–4.8 concentration factors (CF) and 0.56 kg/m² h at 1.9–2.9 CF for 30 kDa ultrafiltration and 500 Da nanofiltration, respectively. For cross-flow ultrafiltration with the 3-kDa membrane, pH and presence of insoluble protein aggregates significantly affected permeate flux. Maximum permeate flux occurred at high pH and in the presence of protein aggregates, achieving a mean value of 4.1 kg/m² h at 1.7 bar transmembrane pressure.     

生物素-亲和素-DNA纳米颗粒信号放大检测载体的构建

目的构建用于检测细菌、病毒等病原体DNA的生物素-亲和素纳米颗粒信号放大载体。方法设计并合成两端和一端标记生物素的寡核苷酸探针(2B/1B-DNA),与抗生蛋白链菌素葡聚糖(Poly-STV)通过生物素与亲和素作用,偶联形成大分子纳米网状颗粒,并筛选最佳探针类型及其长度、2B-DNA和Poly-STV的浓度及比例和反应条件。结果2B-DNA和Poly-STV形成纳米颗粒信号放大载体的最佳浓度分别为1μmol/L和5μmol/L,最佳浓度比为1∶5,2B-DNA长度为60bp,缓冲液为Buffer B,反应条件为55℃,800r/min,20min。结论已成功构建了生物素-亲和素大分子纳米颗粒,可作为DNA检测信号放大技术的备选载体。     

纳米金比色法在酶活力测定中的应用进展

以裸纳米金或功能化纳米金为探针分子发展起来的比色法,因其具有肉眼可视等诸多优势,已被广泛应用于生理活性物质的检测分析中。主要综述了纳米金比色法的应用原理及其在酶活力测定、酶抑制剂筛选等方面的研究进展,并对今后的研究趋势进行了展望。     

A Simple Colorimetric Assay of Bleomycin-Mediated DNA Cleavage Utilizing Double-Stranded DNA-Modified Gold Nanoparticles

A colorimetric assay of DNA cleavage by bleomycin (BLM) derivatives was developed utilizing high colloidal stability on double-stranded (ds) DNA-modified gold nanoparticles (dsDNA-AuNPs) possessing a cleavage site. The assay was performed using dsDNA-AuNPs treated with inactive BLM or activated BLM (Fe(II)⋅BLM). A 10-min exposure in dsDNA-AuNPs with inactive BLM treatment resulted in a rapid color change from red to purple because of salt-induced non-crosslinking aggregation of dsDNA-AuNPs. In contrast, the addition of active Fe(II)⋅BLM retained the red color, probably because of the formation of protruding structures at the outermost phase of dsDNA-AuNPs caused by BLM-mediated DNA cleavage. Furthermore, the results of our model experiments indicate that oxidative base release and DNA-cleavage pathways could be visually distinguished with color change. The present methodology was also applicable to model screening assays using several drugs with different mechanisms related to antitumor activity. These results strongly suggest that this assay with a rapid color change could lead to simple and efficient screening of potent antitumor agents.     

Protein Interactions with Nanoparticle Surfaces: Highlighting Solution NMR Techniques

In the last decade, nanoparticles (NPs) have become a key tool in medicine and biotechnology as drug delivery systems, biosensors and diagnostic devices. The composition and surface chemistry of NPs vary based on the materials used: typically organic polymers, inorganic materials, or lipids. Nanoparticle classes can be further divided into sub‐categories depending on the surface modification and functionalization. These surface properties matter when NPs are introduced into a physiological environment, as they will influence how nucleic acids, lipids, and proteins will interact with the NP surface. While small‐molecule interactions are easily probed using NMR spectroscopy, studying protein‐NP interactions using NMR introduces several challenges. For example, globular proteins may have a perturbed conformation when attached to a foreign surface, and the size of NP‐protein conjugates can lead to excessive line broadening. Many of these challenges have been addressed, and NMR spectroscopy is becoming a mature technique for in situ analysis of NP binding behavior. It is therefore not surprising that NMR has been applied to NP systems and has been used to study biomolecules on NP surfaces. Important considerations include corona composition, protein behavior, and ligand architecture. These features are difficult to resolve using classical surface and material characterization strategies, and NMR provides a complementary avenue of characterization. In this review, we examine how solution NMR can be combined with other analytical techniques to investigate protein behavior on NP surfaces.     

提高硅钼黄比色溶液稳定性的研究

试验、分析和总结了影响β硅钼黄稳定性的显色条件、溶液组成及稳定剂的选用等诸多因素。发现丙酮的稳定效果比乙醇好,且没有光化学还原干扰。试验表明,在pH,0.6～1、钼酸铵含量为0.8%～1.2%、丙酮含量为5%～10%、大体积显色所形成的β硅钼黄在30,℃以下能稳定4,h以上,且重现性好,能较好地满足分析要求。用氟化钾和硼酸进行解聚处理后的试液,若在玻璃容量瓶中显色并放置,氟仍会侵蚀玻璃,引起干扰。研究改进后的硅钼黄法,其准确度和精密度与抗坏血酸还原-硅钼蓝法相似,分析微量二氧化硅S≤0.014%、RSD≤1.5%,但比硅钼蓝法快速、简便、节省试剂。     

Gold Nanoparticle Synthesis,Morphology Control,and Stabilization Facilitated by Functional Polymers

Gold nanoparticles exhibit novel optical and catalytic properties, are nontoxic and biocompatible, and attract considerable interest in a range of applications, e.g. photonics, diagnostics, and therapeutics. The morphology (size and shape) of the nanoparticles and their surface/colloidal properties are very important in the various applications. A methodology for the synthesis in aqueous media of gold nanoparticles with controlled size and shape and exceptional colloidal stability is reviewed. This methodology is based on designer polymers that can exhibit multiple functions on the basis of the polymer intramolecular and supramolecular organization. In addition to being water based, this methodology requires no external energy input and employs commercially available polymers, e.g., poly(ethylene oxide) containing Pluronics or Poloxamers, resulting in low cost and potential environmental benefits.     

Protein Aggregate‐Ligand Binding Assays Based on Microfluidic Diffusional Separation

The measurement of molecular interactions with pathological protein aggregates, including amyloid fibrils, is of central importance in the context of the development of diagnostic and therapeutic strategies against protein misfolding disorders. Probing such interactions by conventional methods can, however, be challenging because of the supramolecular nature of protein aggregates, their heterogeneity, and their often dynamic nature. Here we demonstrate that direct measurement of diffusion on a microfluidic platform enables the determination of affinity and kinetics data for ligand binding to amyloid fibrils in solution. This method yields rapid binding information from only microlitres of sample, and is therefore a powerful technique for identifying and characterising molecular species with potential therapeutic or diagnostic application.     

Building Personalized Cancer Therapeutics through Multi-Omics Assays and Bacteriophage-Eukaryotic Cell Interactions

Bacteriophage-eukaryotic cell interaction provides the biological foundation of Phage Display technology, which has been widely adopted in studies involving protein-protein and protein-peptide interactions, and it provides a direct link between the proteins and the DNA encoding them. Phage display has also facilitated the development of new therapeutic agents targeting personalized cancer mutations. Proteins encoded by mutant genes in cancers can be processed and presented on the tumor cell surface by human leukocyte antigen (HLA) molecules, and such mutant peptides are called Neoantigens. Neoantigens are naturally existing tumor markers presented on the cell surface. In clinical settings, the T-cell recognition of neoantigens is the foundation of cancer immunotherapeutics. This year, we utilized phage display to successfully develop the 1st antibody-based neoantigen targeting approach for next-generation personalized cancer therapeutics. In this article, we discussed the strategies for identifying neoantigens, followed by using phage display to create personalized cancer therapeutics—a complete pipeline for personalized cancer treatment.     

Improving Cell‐Free Protein Synthesis through Genome Engineering of Escherichia coli Lacking Release Factor 1

Site‐specific incorporation of non‐standard amino acids (NSAAs) into proteins opens the way to novel biological insights and applications in biotechnology. Here, we describe the development of a high yielding cell‐free protein synthesis (CFPS) platform for NSAA incorporation from crude extracts of genomically recoded Escherichia coli lacking release factor 1. We used genome engineering to construct synthetic organisms that, upon cell lysis, lead to improved extract performance. We targeted five potential negative effectors to be disabled: the nuclease genes rna, rnb, csdA, mazF, and endA. Using our most productive extract from strain MCJ.559 (csdA^? endA^?), we synthesized 550±40 μg mL^?1 of modified superfolder green fluorescent protein containing p‐acetyl‐L ‐phenylalanine. This yield was increased to ～1300 μg mL^?1 when using a semicontinuous method. Our work has implications for using whole genome editing for CFPS strain development, expanding the chemistry of biological systems, and cell‐free synthetic biology.     

Chemical Protein Modification through Cysteine

The modification of proteins with non‐protein entities is important for a wealth of applications, and methods for chemically modifying proteins attract considerable attention. Generally, modification is desired at a single site to maintain homogeneity and to minimise loss of function. Though protein modification can be achieved by targeting some natural amino acid side chains, this often leads to ill‐defined and randomly modified proteins. Amongst the natural amino acids, cysteine combines advantageous properties contributing to its suitability for site‐selective modification, including a unique nucleophilicity, and a low natural abundance—both allowing chemo‐ and regioselectivity. Native cysteine residues can be targeted, or Cys can be introduced at a desired site in a protein by means of reliable genetic engineering techniques. This review on chemical protein modification through cysteine should appeal to those interested in modifying proteins for a range of applications.     

Improving Pharmaceutical Protein Production in Oryza sativa

Application of plant expression systems in the production of recombinant proteins has several advantages, such as low maintenance cost, absence of human pathogens, and possession of complex post-translational glycosylation capabilities. Plants have been successfully used to produce recombinant cytokines, vaccines, antibodies, and other proteins, and rice (Oryza sativa) is a potential plant used as recombinant protein expression system. After successful transformation, transgenic rice cells can be either regenerated into whole plants or grown as cell cultures that can be upscaled into bioreactors. This review summarizes recent advances in the production of different recombinant protein produced in rice and describes their production methods as well as methods to improve protein yield and quality. Glycosylation and its impact in plant development and protein production are discussed, and several methods of improving yield and quality that have not been incorporated in rice expression systems are also proposed. Finally, different bioreactor options are explored and their advantages are analyzed.     

Structural Property Effect of Nanoparticle Agglomerates on Particle Penetration through Fibrous Filter

Most filtration studies have been conducted with spherical particles; however, many aerosol particles are agglomerates of small primary spheres. Filtration efficiency tests were conducted with silver NP agglomerates, with the agglomerate structure controlled by altering the temperature of a sintering furnace. The mobility diameter and mass of the silver NP agglomerates were measured using a differential mobility analyzer together with an aerosol particle mass analyzer. From these measurements, it was found that the fractal-like dimension, D _fm, varied from 2.07 to 2.95 as the sintering temperatures was increased from ambient to 600°C. The agglomerates were essentially fully coalesced at 600°C allowing direct comparison of the filtration behavior of the agglomerate to that of a sphere with the same mobility diameter. Other agglomerate properties measured include the primary diameter, the agglomerate length and aspect ratio, and the dynamic shape factor.

Agglomerate filtration modeling with no adjustable parameters has been investigated in terms of diffusion, impaction, and interception. The model results agree qualitatively with the experimental results in the particle size range of 50 to 300 nm. The results indicated that the larger interception length of agglomerates is responsible for the smaller penetration through a fibrous filter in comparison to spherical particles with the same mobility diameters.