Evaluation of density functional theory methods for studying chemisorption of arsenite on ferric hydroxides

Understanding adsorption of arsenic on ferric hydroxide surfaces is important for predicting the fate of arsenic in the environment and in designing treatment systems for removing arsenic from potable water. This research investigated the binding of arsenite to ferric hydroxide clusters using several density functional theory methods. Comparison of calculated and experimentally measured As-O and As-Fe bond distances indicated that As(III) forms both bidentate and monodentante corner-sharing complexes with Fe(III) octahedra. Edge-sharing As(III) complexes were less energetically favorable and had As-O and As-Fe distances that deviated more from experimentally measured values than corner-sharing complexes. The hydrated bidentate complex was the most energetically favorable in the vacuum phase, while the monodentate complex was most favored in the aqueous phase. Structures optimized using the Harris and Perdew-Wang local functionals were close to both experimental data and structures optimized using the nonlocal Becke-Lee-Yang-Parr (BLYP) functional. Binding energies calculated with the gradient-corrected BLYP functional were only weakly dependent on the method used for geometry optimization. The approach of using low-level structures coupled with higher level single-point energies was found to reduce computational time by 75% with no loss in accuracy of the computed binding energies.     

Electrochemical investigation of the rate-limiting mechanisms for trichloroethylene and carbon tetrachloride reduction at iron surfaces

The mechanisms involved in reductive dechlorination of carbon tetrachloride (CT) and trichloroethylene (TCE) at iron surfaces were studied to determine if their reaction rates were limited by rates of electron transfer. Chronoamperometry and chronopotentiometry analyses were used to determine the kinetics of CT and TCE reduction by a rotating disk electrode in solutions of constant halocarbon concentration. Rate constants for CT and TCE dechlorination were measured as a function of the electrode potential over a temperature range from 2 to 42 degrees C. Changes in dechlorination rate constants with electrode potential were used to determine the apparent electron-transfer coefficients at each temperature. The transfer coefficient for CT dechlorination was 0.22 +/- 0.02 and was independent of temperature. The temperature independence of the CT transfer coefficient is consistent with a rate-limiting mechanism involving an outer-sphere electron-transfer step. Conversely, the transfer coefficient for TCE was temperature dependent and ranged from 0.06 +/- 0.01 at 2 degrees C to 0.21 +/- 0.02 at 42 degrees C. The temperature-dependent TCE transfer coefficient indicated that its reduction rate was limited by chemical dependent factors and not exclusively by the rate of electron transfer. In accord with a rate-limiting mechanism involving an electron-transfer step, the apparent activation energy (Ea) for CT reduction decreased with decreasing electrode potential and ranged from 33.0 +/- 1.6 to 47.8 +/- 2.0 kJ/mol. In contrast, the Ea for TCE reduction did not decline with decreasing electrode potential and ranged from 29.4 +/- 3.4 to 40.3 +/- 3.9. The absence of a potential dependence for the TCE Ea supports the conclusion that its reaction rate was not limited by an electron-transfer step. The small potential dependence of TCE reaction rates can be explained by a reaction mechanism in which TCE reacts with atomic hydrogen produced from reduction of water.     

环木菠萝烯醇阿魏酸酯分子结构性质的密度泛函理论研究

该文基于密度泛函理论对环木菠萝烯醇阿魏酸酯分子结构、反应活性位点(分子表面静电势、原子电荷、前线分子轨道、概念密度泛函活性指数)、分子内弱作用力、芳香性以及红外光谱进行分析.结果表明,环木菠萝烯醇阿魏酸酯酚羟基氢原子(H99)附近具有分子表面静电势极大点(53.580 kcal/mol),且H99带有较高正电荷(0.3...     

Understanding nitrate reactions with zerovalent iron using tafel analysis and electrochemical impedance spectroscopy

This study investigated the reaction mechanisms of nitrate (NO3-) with zerovalent iron (ZVI) media under conditions relevantto groundwatertreatment using permeable reactive barriers (PRB). Reaction rates of NO3- with freely corroding and with cathodically or anodically polarized iron wires were measured in batch reactors. Tafel analysis and electrochemical impedance spectroscopy (EIS) were used to investigate the reactions occurring on the iron surfaces. Reduction of NO3- by corroding iron resulted in near stoichiometric production of NO2-, which did not measurably react in the absence of added Fe(II). Increasing NO3- concentrations resulted in increasing corrosion currents. However, EIS and Tafel analyses indicated that there was little direct reduction of NO3- at the ZVI surface, despite the presence of water reduction. This behavior can be attributed to formation of a microporous oxide on the iron surfaces that blocked reduction of NO3- and NO2- but did not block water reduction. This finding is consistent with previous observations that NO3- impedes reduction of organic compounds by ZVI. Nitrite concentrations greater than 4 mM resulted in anodic passivation of the iron, but passivation was not observed with NO3- concentrations as high as 96 mM. This indicates that the passivating oxide preventing NO3- reduction was permeable toward cation migration. Since reaction with Fe(0) can be excluded asthe mechanism for NO3- and NO2- reduction, reaction with Fe(II)-containing oxides coating the iron surface is the most likely reaction mechanism. This suggests that short-term batch tests requiring little turnover of reactive sites on the iron surface may overestimate long-term rates of NO3- removal because the effects of passivation are not apparent in batch tests conducted with high initial Fe(II) to NO3- ratios.     

UV/Visible spectra of natural polyphenols: A time-dependent density functional theory study

In addition to their numerous biological activities, natural and hemisynthetic polyphenols contribute to the large variety of colours (from red to violet) in nature (e.g., fruit, vegetables, leaves and petals). In order to understand the colour variation attributed to the multitude of chemical structures of this wide class of compounds, time-dependent density functional quantum-chemical calculations at the B3P86/6-311+G(d,p) level of theory appears as a relevant and efficient tool. The UV/Vis properties of 33 polyphenols were systematically investigated, including mainly flavonoids, isoflavonoids and flavonolignans. On the basis of molecular orbital analysis we established the structure-property relationship, inter alia showing the role of π orbital (de-)localisation, mesomeric (+M) effects of hydroxyl groups and structural modification of the molecular backbone. The results might help in the future, for example, for the prediction of novel hemisynthetic compounds.     

Understanding chromate reaction kinetics with corroding iron media using Tafel analysis and electrochemical impedance spectroscopy

The kinetics of chromate removal from contaminated water by zerovalent iron media are not well understood. This study investigated the reactions occurring on iron surfaces in chromate solutions in order to understand the removal kinetics and to assess the long-term ability of zerovalent iron for removing Cr(VI) from contaminated water. Tafel polarization analysis and electrochemical impedance spectroscopy were used to determine the corrosion rates and charge-transfer resistances associated with Cr(VI) removal by iron wires suspended in electrolyte solutions with initial Cr(VI) concentrations of 10,000 microg/L. The condition of the iron surfaces at the time of their exposure to chromate determined the effectiveness of the iron for chromate removal. Both iron coated with a water-formed oxide and initially oxide-free iron were effective for chromate removal. However, iron coated with an air-formed oxide was an order of magnitude less effective for removing soluble chromium. Although iron with the air-formed oxide was largely passivated with respect to chromate removal, its overall rate of corrosion was similar to that for iron with the other initial surface conditions. This indicates that water, but not chromate, was able to penetrate the air-formed oxide coating and access cathodic sites. For all initial surface conditions, addition of chromate decreased the corrosion rate by increasing the corrosion potential and the anodic charge transfer resistance. Although Cr(VI) is a strong oxidant rates of iron corrosion were not proportional to the aqueous Cr(VI) concentrations due to anodic control of iron corrosion. Under anodically controlled conditions, the rate of corrosion was limited by the rate at which Fe2+ could be released at anodic sites and not by the rate at which oxidants were able to accept electrons. This study shows that the zero order removal kinetics of Cr(VI) by iron media can be explained by anodic control of iron corrosion and the concomitant anodic control of Cr(VI) reduction.     

Characterization and density functional theory study of the antioxidant activity of quercetin and its sugar-containing analogues

Inhibition of free radicals using quercetin, hyperin and rutin is examined to determine their antioxidant effects and the structure–activity relationships of flavonoids. Two species of the free radicals are used, including hydroxyl radical (·OH) and superoxide anion radical (O₂ ^?·). Density functional theory calculations under the level of B3LYP/6-311G (d) have been utilized to explore the structure, molecular properties and antioxidant abilities of the three flavonoids. Bond dissociation enthalpy (BDE) and frontier molecular orbital energy gap are investigated. They are compared with the experiment results assayed by the spectrophotometric. All of the flavonoids show a high activity on inhibiting ·OH and O₂ ^?· radicals. Scavenging activity determined by half maximal inhibitory concentration (IC₅₀) values of the three flavonoids decreases in the order: quercetin > hyperin > rutin. The calculations show that quercetin owns the lowest BDE values, which agree well with the experimental results of antioxidant activity determined by IC₅₀ values.     

Assets of imputation to ultra-high density for productive and functional traits

The aim of this study was to evaluate different-density genotyping panels for genotype imputation and genomic prediction. Genotypes from customized Golden Gate Bovine3K BeadChip [LD3K; low-density (LD) 3,000-marker (3K); Illumina Inc., San Diego, CA] and BovineLD BeadChip [LD6K; 6,000-marker (6K); Illumina Inc.] panels were imputed to the BovineSNP50v2 BeadChip [50K; 50,000-marker; Illumina Inc.]. In addition, LD3K, LD6K, and 50K genotypes were imputed to a BovineHD BeadChip [HD; high-density 800,000-marker (800K) panel], and with predictive ability evaluated and compared subsequently. Comparisons of prediction accuracy were carried out using Random boosting and genomic BLUP. Four traits under selection in the Spanish Holstein population were used: milk yield, fat percentage (FP), somatic cell count, and days open (DO). Training sets at 50K density for imputation and prediction included 1,632 genotypes. Testing sets for imputation from LD to 50K contained 834 genotypes and testing sets for genomic evaluation included 383 bulls. The reference population genotyped at HD included 192 bulls. Imputation using BEAGLE software (http://faculty.washington.edu/browning/beagle/beagle.html) was effective for reconstruction of dense 50K and HD genotypes, even when a small reference population was used, with 98.3% of SNP correctly imputed. Random boosting outperformed genomic BLUP in terms of prediction reliability, mean squared error, and selection effectiveness of top animals in the case of FP. For other traits, however, no clear differences existed between methods. No differences were found between imputed LD and 50K genotypes, whereas evaluation of genotypes imputed to HD was on average across data set, method, and trait, 4% more accurate than 50K prediction, and showed smaller (2%) mean squared error of predictions. Similar bias in regression coefficients was found across data sets but regressions were 0.32 units closer to unity for DO when genotypes were imputed to HD density. Imputation to HD genotypes might produce higher stability in the genomic proofs of young candidates. Regarding selection effectiveness of top animals, more (2%) top bulls were classified correctly with imputed LD6K genotypes than with LD3K. When the original 50K genotypes were used, correct classification of top bulls increased by 1%, and when those genotypes were imputed to HD, 3% more top bulls were detected. Selection effectiveness could be slightly enhanced for certain traits such as FP, somatic cell count, or DO when genotypes are imputed to HD. Genetic evaluation units may consider a trait-dependent strategy in terms of method and genotype density for use in the genome-enhanced evaluations.     

Electronic polarizability as a predictor of biodegradation rates of dimethylnaphthalenes. an ab initio and density functional theory study

Geometries, relative stabilities, electronic excited states, atomic charges, and electronic dipole polarizabilities of dimethylnaphthalene (DMN) isomers have been calculated in gas and aqueous phases by ab initio and DFT methods. At the highest levels of calculation, alpha,alpha-DMN (2,6-DMN, 2,7-DMN, and 2,3-DMN) are the lowest energy isomers, while 1,8-DMN is the less stable by 7-8 kcal mol(-1). The averaged electronic polarizability, , is dependent on the position of the methyl substituents, increasing in the order alpha, alpha-DMN < (a, beta-DMN < beta, beta-DMN, with the largest values being obtained for 2,6-DMN and 2,7-DMN, while the lowest value is calculated for 1,8-DMN isomer. Polarizability differences among the isomers have been related to their spectroscopic properties. The computed value of DMN isomers, with the notable exception of 2,7-DMN, is in excellent linear relationship with the observed first-order biomass-normalized rate coefficient, a parameter related to the rate of biodegradation of polycyclic aromatic hydrocarbons (PAHs). This result suggests that electronic polarizability may be a useful tool for prediction of biodegradation trends of series of compounds, and inductive and dispersive interactions play a fundamental role in the biodegradation process of DMNs. The present approach is potentially suitable for applications on PAHs with higher molecular weight.     

利用铁、铜间相互作用减轻烤烟铜毒害的研究

采用温室溶液培养方法,研究利用铁、铜间相互作用减轻烤烟铜毒害。试验结果显示,K326品种Cu2 毒害临界值在1.0-1.2mg/L之间。在低浓度Cu2 (0.1-1.2mg/L)时,烟株吸铁总量增加;高浓度Cu2 (≥1.4mg/L)时,吸铁总量降低。溶液中添加过量的Fe3 (5.61mg/L和11.23mg/L)后,烟株的吸铁量显著增加,而吸铜量明显减少,铁和铜元素由根系向地上部的转运增加,生物量增加4-7倍,可以明显减轻Cu2 的毒害。因此,利用铁、铜间相互作用减轻烤烟铜毒害是可行的。     

CO2-filling capacity and selectivity of carbon nanopores: synthesis, texture, and pore-size distribution from quenched-solid density functional theory (QSDFT)

Porous carbons synthesized by KOH activation of petroleum coke can have high surface areas, over 3000 m(2)/g, and high CO(2) sorption capacity, over 15 wt % at 1 bar. This makes them attractive sorbents for carbon capture from combustion flue gas. Quenched solid density functional theory (QSDFT) analysis of high-resolution nitrogen-sorption data for such materials leads to the conclusion that it is the pores smaller than 1 nm in diameter that fill with high-density CO(2) at atmospheric pressure. Upon increasing pressure, larger and larger pores are filled, up to about 4 nm at 10 bar. An ideal CO(2)/N(2) selectivity of such carbon materials tends to decrease substantially upon increasing pressure, for example, from about 8-10 at 1 bar to about 4-5 at 10 bar. All in all, this work confirms the robust CO(2)-filling properties of porous carbon sorbents, their low-pressure selectivity advantages, and points to the critical role of <1 nm pores that can be controlled with activation conditions.     

Gas-phase formaldehyde adsorption isotherm studies on activated carbon: correlations of adsorption capacity to surface functional group density

Formaldehyde (HCHO) adsorption isotherms were developed for the first time on three activated carbons representing one activated carbon fiber (ACF) cloth, one all-purpose granular activated carbon (GAC), and one GAC commercially promoted for gas-phase HCHO removal. The three activated carbons were evaluated for HCHO removal in the low-ppm(v) range and for water vapor adsorption from relative pressures of 0.1-0.9 at 26 °C where, according to the IUPAC isotherm classification system, the adsorption isotherms observed exhibited Type V behavior. A Type V adsorption isotherm model recently proposed by Qi and LeVan (Q-L) was selected to model the observed adsorption behavior because it reduces to a finite, nonzero limit at low partial pressures and it describes the entire range of adsorption considered in this study. The Q-L model was applied to a polar organic adsorbate to fit HCHO adsorption isotherms for the three activated carbons. The physical and chemical characteristics of the activated carbon surfaces were characterized using nitrogen adsorption isotherms, X-ray photoelectron spectroscopy (XPS), and Boehm titrations. At low concentrations, HCHO adsorption capacity was most strongly related to the density of basic surface functional groups (SFGs), while water vapor adsorption was most strongly influenced by the density of acidic SFGs.     

利用红曲菌及植物乳酸杆菌生产功能性镇江香醋工艺的研究

在基本不改变原有镇江香醋生产工艺和控制参数的条件下,添加安卡红曲菌和植物乳酸杆菌,从而保持镇江香醋的原有风味,同时提高莫纳考林K和γ-氨基丁酸的含量,增强镇江香醋的功能性。     

Use of iron oxides to influence the weathering characteristics of wood surfaces: a systematic survey of particle size,crystal shape and concentration

Iron oxide pigments may be an alternative treatment for limiting weathering of wood surfaces instead of stains or clear coatings. An earlier study suggested the ability of iron oxides to protect against discoloration varied with particle size. In this study, iron oxides with different crystal shapes and particle sizes were investigated along with a carbon black pigment. Loblolly pine (Pinus taeda L.) samples were impregnated with water borne iron oxide dispersions, exposed to predetermined amounts of solar radiation in the high desert of Eastern Oregon, and then evaluated for discoloration, checking and changes in chemical composition. The results from this observational study suggest that much higher levels of iron oxide are required than previously thought to prevent discoloration and limit lignin degradation. Large particle sizes led to greater opacity and provided greater protection, but no iron oxide protected as well as carbon black. The findings also suggested that iron oxides had no effect on checking, indicating that the mechanisms of discoloration and checking were not directly related.     

Hygienic food handling behaviors: attempting to bridge the intention-behavior gap using aspects from temporal self-regulation theory

An estimated 25% of the populations of both the United States and Australia suffer from foodborne illness every year, generally as a result of incorrect food handling practices. The aim of the current study was to determine through the application of the theory of planned behavior what motivates these behaviors and to supplement the model with two aspects of temporal self-regulation theory--behavioral prepotency and executive function--in an attempt to bridge the "intention-behavior gap." A prospective 1-week design was utilized to investigate the prediction of food hygiene using the theory of planned behavior with the additional variables of behavioral prepotency and executive function. One hundred forty-nine undergraduate psychology students completed two neurocognitive executive function tasks and a self-report questionnaire assessing theory of planned behavior variables, behavioral prepotency, and intentions to perform hygienic food handling behaviors. A week later, behavior was assessed via a follow-up self-report questionnaire. It was found that subjective norm and perceived behavioral control predicted intentions and intentions predicted behavior. However, behavioral prepotency was found to be the strongest predictor of behavior, over and above intentions, suggesting that food hygiene behavior is habitual. Neither executive function measure of self-regulation predicted any additional variance. These results provide support for the utility of the theory of planned behavior in this health domain, but the augmentation of the theory with two aspects of temporal self-regulation theory was only partially successful.     

Bioeconomics of invasive species: using real options theory to integrate ecology,economics, and risk management

Policy makers face two countervailing incentives in invasive species management—the Pull-incentive to move quickly and the Push-incentive to wait-and-see before making irreversible investments. Real options theory is used to help understand this fundamental trade-off both in design and application. In designing policies, real options theory shows how the management of invasive species should account for the intertwined concepts of ecological risk/ecological irreversibility and economic risk/economic irreversibility. In applying policies, real options theory shows for species spreading slowly with little uncertainty, the push-incentive dominates, advocating a wait-and-see approach. In contrast, for fastspreading species, their diffusion is too fast and too unpredictable to do anything other than act immediately – the pull-incentive dominates. In addition, results indicate both the source and the magnitude of uncertainty matter, but the nature of the impact depends on the irreversibility of the policy decision highlighting the key value of flexibility in policy design and application.     

Simultaneous determination of 30 hormones illegally added to anti-ageing functional foods using UPLC-MS/MS coupled with SPE clean-up

A novel analytical method employing solid-phase extraction (SPE) coupled with ultra-high-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) was developed for the simultaneous determination of 30 hormones in anti-ageing functional foods (capsules, powders and tablets). The analytes were extracted with acetic acid–acetonitrile (1–99 v/v), methanol and acetone, respectively. The extract was purified using a combined column, followed by analyte detection with electrospray ionisation in positive- or negative-ion modes. The results indicated that the 30 compounds had good linear correlations in the range of 1–1000 μg kg^–1, and the correlation coefficients were above 0.99. The limits of detection (LOD) and limits of quantification (LOQ) were 0.03–2 and 0.1–5 μg kg^–1, respectively. The average recovery of 30 compounds at the three spiked levels varied from 74.7% to 124.1%, and the relative standard deviation (RSD) was 2.4–15.0%. This method was applied to the analysis of hormones in 14 real samples of which seven hormones (such as estrone, dienestrol) were detected in four samples, but the remainder of the hormones were not detected. The developed method is sensitive, efficient, reliable and applicable to real samples.     

Study of the effect of different iron salts used to fortify infant formulas on the bioavailability of trace elements using ICP-OES

Five different iron salts—sulphate, lactate, diphosphate, encapsulated sulphate, and EDTA-Fe(III)—were used to fortify an infant formula to study possible differences in iron bioavailability. The effect of iron fortification at two levels (0.5 mg Fe 100 kcal⁻¹ and 1.5 mg Fe 100 kcal⁻¹) on the bioavailability of other important trace elements such as copper and zinc were also evaluated. An in vitro method based on element dialysability (i.e., the fraction available by absorption) to simulate newborn digestion was applied to study iron, copper and zinc bioavailability. Enzyme treatment was carried out in two stages involving pepsin at pH 5.0 followed by pancreatin at pH 7.0. The incubation times were short to mimic the transit of meal in an infant's gastrointestinal tract. Iron, copper and zinc were determined using inductively coupled plasma atomic emission spectrometry using an axially configured device. The percentages of Fe, Cu and Zn dialysable at both iron fortification levels are discussed. From these results, EDTA-Fe (III) appears to be the most adequate salt for iron fortification of infant formulas.     

Estimating partition coefficients for fuel-water systems: developing linear solvation energy relationships using linear solvent strength theory to handle mixtures

In many environmental transport problems, organic solutes partition between immiscible phases that consist of liquid mixtures. To estimate the corresponding partition coefficients, we evaluated the efficacy of combining linear solvation energy relationships (LSERs) developed for pure 1:1 systems via application of linear solvent strength theory. In this way, existing LSERs could be extended to treat solute partitioning from gasoline, diesel fuel, and similar mixtures into contacting aqueous mixtures. Unlike other approaches, this method allowed prediction of liquid-liquid partition coefficients in a variety of fuel-water systems for a broad range of dilute solutes. When applied to 37 polar and nonpolar solutes partitioning between an aqueous mixture and 12 different fuel-like mixtures (many including oxygenates), the root-mean-squared error was a factor of approximately 2.5 in the partition coefficient. This was considerably more accurate than application of Raoult's law for the same set of systems. Regulators and scientists could use this method to estimate fuel-water partition coefficients of novel additives in future fuel formulations and thereby provide key inputs for environmental transport assessments of these compounds.