A new parameterization of canopy spectral response to incident solar radiation: case study with hyperspectral data from pine dominant forest

A small set of independent variables generally seems to suffice when attempting to describe the spectral response of a vegetation canopy to incident solar radiation. This set includes the soil reflectance, the single-scattering albedo, canopy transmittance, reflectance and interception, the portion of uncollided radiation in the total incident radiation, and portions of collided canopy transmittance and interception. All of these are measurable; they satisfy a simple system of equations and constitute a set that fully describes the law of energy conservation in vegetation canopies at any wavelength in the visible and near-infrared part of the solar spectrum. Further, the system of equations specifies the relationship between the optical properties at the leaf and the canopy scales. Thus, the information content of hyperspectral data can be fully exploited if these variables can be retrieved, for they can be more directly related to some of the physical properties of the canopy (e.g. leaf area index). This paper demonstrates this concept through retrievals of single-scattering albedo, canopy absorptance, portions of uncollided and collided canopy transmittance, and interception from hyperspectral data collected during a field campaign in Ruokolahti, Finland, June 14-21, 2000. The retrieved variables are then used to estimate canopy leaf area index, vegetation ground cover, and also the ratio of direct to total incident solar radiation at blue, green, red, and near-infrared spectral intervals.     

水稻冠层光谱特征及其与LAI的关系研究

氮素营养是影响作物生长与产量的最主要限制因子之一。准确及时地监测或诊断出作物氮素营养状况,对提高氮素利用效率和作物管理水平、减少过度施氮造成的环境污染具有重要意义。本研究在不同施氮水平处理的水稻试验小区,对水稻整个生长期内冠层反射光谱进行了较系统、密集的测定,同时测定了几个重要生育期水稻的叶面积指数。研究结果表明:随着施氮量的增加,水稻冠层光谱在各生育期间呈现出一定的规律性,在近红外部分(710～1 220 nm),冠层光谱反射率随着施氮水平的提高而升高,而在可见光部分(460～680 nm),水稻冠层的光谱反射率反而逐渐降低。经冠层光谱差异显著性检验发现:水稻灌浆期以前,对施氮水平最为敏感的波段是绿光(560～610 nm)和近红外(710～760 nm)部分;转换为归一化植被指数(NDVI)以后,差异最显著的是(R760-R560)/(R760+R560)。不同氮肥处理的水稻LAI随时间变化曲线大致都呈抛物线型,中低水平施氮肥水稻LAI随时间的变化曲线比较平缓,而高水平施氮肥LAI曲线则变化比较剧烈。冠层光谱反射与叶面积的相关分析结果表明:在水稻抽穗前,叶面积与冠层光谱反射率相关性较差;而抽穗后,叶面积与冠层光谱有较高的相关性。     

Estimating leaf nitrogen concentration in heterogeneous crop plants from hyperspectral reflectance

The estimation of leaf nitrogen concentration (LNC) in crop plants is an effective way to optimize nitrogen fertilizer management and to improve crop yield. The objectives of this study were to (1) analyse the spectral features, (2) explore the spectral indices, and (3) investigate a suitable modelling strategy for estimating the LNC of five species of crop plants (rice (Oryza sativa L.), corn (Zea mays L.), tea (Camellia sinensis), gingili (Sesamum indicum), and soybean (Glycine max)) with laboratory-based visible and near-infrared reflectance spectra (300–2500 nm). A total of 61 leaf samples were collected from five species of crop plant, and their LNC and reflectance spectra were measured in laboratories. The reflectance spectra of plants were reduced to 400–2400 and smoothed using the Savitzky–Golay (SG) smoothing method. The normalized band depth (NBD) values of all bands were calculated from SG-smoothed reflectance spectra, and a successive projections algorithm-based multiple linear regression (SPA-MLR) method was then employed to select the spectral features for five species. The SG-smoothed reflectance spectra were resampled using a spacing interval of 10 nm, and normalized difference spectral index (NDSI) and three-band spectral index (TBSI) were calculated for all wavelength combinations between 400 and 2400 nm. The NDSI and TBSI values were employed to calibrate univariate regression models for each crop species. The leave-one-out cross-validation procedure was used to validate the calibrated regression models. Study results showed that the spectral features for LNC estimation varied among different crop species. TBSI performed better than NDSI in estimating LNC in crop plants. The study results indicated that there was no common optimal TBSI and NDSI for different crop species. Therefore, we suggest that, when monitoring LNC in heterogeneous crop plants with hyperspectral reflectance, it might be appropriate to first classify the data set considering different crop species and then calibrate the model for each species. The method proposed in this study requires further testing with the canopy reflectance and hyperspectral images of heterogeneous crop plants.     

Study of vegetation spectral anomaly behaviour in a porphyry copper mine area based on hyperspectral indices

ABSTRACT

Hyperspectral remote sensing is economical and fast, and it can reveal detailed spectral information of plants. Hence, hyperspectral data are used in this study to analyse the spectral anomaly behaviours of vegetation in porphyry copper mine areas. This analytical method is used to compare the leaf spectra and relative differences among the vegetation indices; then, the correlation coefficients were computed between the soil copper content and vegetation index of Quercus spinosa leaves at both the leaf scale and the canopy scale in the Chundu mine area with different geological backgrounds. Lastly, this study adopts hyperspectral data for the level slicing of vegetation anomalies in the Chundu mine area. The results showed that leaf spectra in the orebody and background area differed greatly, especially in the infrared band (750 nm – 1300 nm); moreover, some indices like the normalized water index (NWI) and normalized difference water index (NDWI) of Quercus spinosa and Lamellosa leaves are sensitive to changes in the geological background. Compared with the canopy, the leaf hyperspectral indices of Quercus spinosa in Chundu can better reflect soil cuprum (Cu) anomaly. In addition, the NWI and NDWI of Quercus spinosa are significantly correlated with the soil Cu content at both the canopy scale and the leaf scale. Consequently, the results of the vegetation anomaly level slicing can adequately reflect the plant anomalies from ore bodies and nearby areas, thereby providing a new ore-finding method for areas with a high degree of vegetation coverage.     

An AOTF-based hyperspectral imaging system for field use in ecophysiological and agricultural applications

An AOTF (Acousto-Optic Tunable Filter)-based spectral imager was developed for hyperspectral measurement of plant reflectance in the field. A hyperspectral image cube for the spectral region between 450-900 nm could be acquired at 3 to 5 nm resolution intervals within a few seconds. The system was light and compact, and both the spectral wavelengths and intervals were programmable with PC control. Wavelengths could be tuned rapidly, either sequentially or randomly. The hyperspectral image cube for rice canopies obtained by the system showed its potential in the estimation of leaf nitrogen and chlorophyll concentrations. The AOTF-based hyperspectral system would have great potential for further investigations in remote sensing of biochemical and ecophysiological plant variables.     

Comparison of different vegetation indices for the remote assessment of green leaf area index of crops

Many algorithms have been developed for the remote estimation of biophysical characteristics of vegetation, in terms of combinations of spectral bands, derivatives of reflectance spectra, neural networks, inversion of radiative transfer models, and several multi-spectral statistical approaches. However, the most widespread type of algorithm used is the mathematical combination of visible and near-infrared reflectance bands, in the form of spectral vegetation indices. Applications of such vegetation indices have ranged from leaves to the entire globe, but in many instances, their applicability is specific to species, vegetation types or local conditions. The general objective of this study is to evaluate different vegetation indices for the remote estimation of the green leaf area index (Green LAI) of two crop types (maize and soybean) with contrasting canopy architectures and leaf structures. Among the indices tested, the chlorophyll Indices (the CI_Green, the CI_Red-edge and the MERIS Terrestrial Chlorophyll Index, MTCI) exhibited strong and significant linear relationships with Green LAI, and thus were sensitive across the entire range of Green LAI evaluated (i.e., 0.0 to more than 6.0 m²/m²). However, the CI_Red-edge was the only index insensitive to crop type and produced the most accurate estimations of Green LAI in both crops (RMSE = 0.577 m²/m²). These results were obtained using data acquired with close range sensors (i.e., field spectroradiometers mounted 6 m above the canopy) and an aircraft-mounted hyperspectral imaging spectroradiometer (AISA). As the CI_Red-edge also exhibited low sensitivity to soil background effects, it constitutes a simple, yet robust tool for the remote and synoptic estimation of Green LAI. Algorithms based on this index may not require re-parameterization when applied to crops with different canopy architectures and leaf structures, but further studies are required for assessing its applicability in other vegetation types (e.g., forests, grasslands).     

A novel two-step method for winter wheat-leaf chlorophyll content estimation using a hyperspectral vegetation index

Remote sensing estimation of leaf chlorophyll content is of importance to crop nutrition diagnosis and yield assessment, yet the feasibility and stability of such estimation has not been assessed thoroughly for mixed pixels. This study analyses the influence of spectral mixing on leaf chlorophyll content estimation using canopy spectra simulated by the PROSAIL model and the spectral linear mixture concept. It is observed that the accuracy of leaf chlorophyll content estimation would be degraded for mixed pixels using the well-accepted approach of the combination of transformed chlorophyll absorption index (TCARI) and optimized soil-adjusted vegetation index (OSAVI). A two-step method was thus developed for winter wheat chlorophyll content estimation by taking into consideration the fractional vegetation cover using a look-up-table approach. The two methods were validated using ground spectra, airborne hyperspectral data and leaf chlorophyll content measured the same time over experimental winter wheat fields. Using the two-step method, the leaf chlorophyll content of the open canopy was estimated from the airborne hyperspectral imagery with a root mean square error of 5.18 μg cm^?2, which is an improvement of about 8.9% relative to the accuracy obtained using the TCARI/OSAVI ratio directly. This implies that the method proposed in this study has great potential for hyperspectral applications in agricultural management, particularly for applications before crop canopy closure.     

Temporal change in canopy reflectance at visible wavelength as a biophysical indicator of jute (Corchorus capsularis L.) growth

Changes in the reflectance and transmittance of jute canopy at different visible wavelengths of solar radiation are measured at different growth stages throughout the period of half crop cycle. The reflectance is found to gradually decrease and attain a steady value with canopy growth up to about one‐third of the crop cycle. As an independent study, vegetation growth parameters such as canopy height, leaf length, leaf area are simultaneously measured. It is concluded that although these parameters have individual properties, the whole canopy ultimately occupies a constant fraction of the air volume over the soil. As a combined effect of the above parameters, the transmittance through the leaf–air composite becomes saturated. A suitable mathematical explanation is given for the above. It is affirmed from these two independent sets of experiments that the vegetation growth is truly echoed in the temporal change in visible wavelength reflectance, the remotely sensible parameter. Thus the present work proposes a methodology for remotely observing the growth of vegetation and it is justified with jute, an important cash crop in eastern India.     

Vegetation canopy reflectance

Possible cause-effect relationships in producing vegetation canopy reflectance are discussed. Hemispherical reflectance and even bidirectional reflectance measurements are shown to be inadequate to predict or understand vegetation canopy reflectance in many situations. Among the additional important parameters necessary for prediction and understanding of vegetation canopy reflectance are leaf hemispherical transmittance, leaf area and orientation, characteristics of other components of the vegetation canopy (stalks, trunks, limbs), soil reflectance, solar zenith angle, look angle, and azimuth angle. The effects of these parameters on vegetation canopy bidirectional spectral reflectance are described.     

Hyperspectral vegetation indices and novel algorithms for predicting green LAI of crop canopies: Modeling and validation in the context of precision agriculture

A growing number of studies have focused on evaluating spectral indices in terms of their sensitivity to vegetation biophysical parameters, as well as to external factors affecting canopy reflectance. In this context, leaf and canopy radiative transfer models are valuable for modeling and understanding the behavior of such indices. In the present work, PROSPECT and SAILH models have been used to simulate a wide range of crop canopy reflectances in an attempt to study the sensitivity of a set of vegetation indices to green leaf area index (LAI), and to modify some of them in order to enhance their responsivity to LAI variations. The aim of the paper was to present a method for minimizing the effect of leaf chlorophyll content on the prediction of green LAI, and to develop new algorithms that adequately predict the LAI of crop canopies. Analyses based on both simulated and real hyperspectral data were carried out to compare performances of existing vegetation indices (Normalized Difference Vegetation Index [NDVI], Renormalized Difference Vegetation Index [RDVI], Modified Simple Ratio [MSR], Soil-Adjusted Vegetation Index [SAVI], Soil and Atmospherically Resistant Vegetation Index [SARVI], MSAVI, Triangular Vegetation Index [TVI], and Modified Chlorophyll Absorption Ratio Index [MCARI]) and to design new ones (MTVI1, MCARI1, MTVI2, and MCARI2) that are both less sensitive to chlorophyll content variations and linearly related to green LAI. Thorough analyses showed that the above existing vegetation indices were either sensitive to chlorophyll concentration changes or affected by saturation at high LAI levels. Conversely, two of the spectral indices developed as a part of this study, a modified triangular vegetation index (MTVI2) and a modified chlorophyll absorption ratio index (MCARI2), proved to be the best predictors of green LAI. Related predictive algorithms were tested on CASI (Compact Airborne Spectrographic Imager) hyperspectral images and, then, validated using ground truth measurements. The latter were collected simultaneously with image acquisition for different crop types (soybean, corn, and wheat), at different growth stages, and under various fertilization treatments. Prediction power analysis of proposed algorithms based on MCARI2 and MTVI2 resulted in agreements between modeled and ground measurement of non-destructive LAI, with coefficients of determination (r²) being 0.98 for soybean, 0.89 for corn, and 0.74 for wheat. The corresponding RMSE for LAI were estimated at 0.28, 0.46, and 0.85, respectively.     

Responses of the reflectance indices PRI and NDVI to experimental warming and drought in European shrublands along a north-south climatic gradient

The aim of this study was to evaluate the use of ground-based canopy reflectance measurements to detect changes in physiology and structure of vegetation in response to experimental warming and drought treatment at six European shrublands located along a North-South climatic gradient. We measured canopy reflectance, effective green leaf area index (green LAIe) and chlorophyll fluorescence of dominant species. The treatment effects on green LAIe varied among sites. We calculated three reflectance indices: photochemical reflectance index PRI [531 nm; 570 nm], normalized difference vegetation index NDVI₆₈₀ [780 nm; 680 nm] using red spectral region, and NDVI₅₇₀ [780 nm; 570 nm] using the same green spectral region as PRI. All three reflectance indices were significantly related to green LAIe and were able to detect changes in shrubland vegetation among treatments. In general warming treatment increased PRI and drought treatment reduced NDVI values. The significant treatment effect on photochemical efficiency of plants detected with PRI could not be detected by fluorescence measurements. However, we found canopy level measured PRI to be very sensitive to soil reflectance properties especially in vegetation areas with low green LAIe. As both soil reflectance and LAI varied between northern and southern sites it is problematic to draw universal conclusions of climate-derived changes in all vegetation types based merely on PRI measurements. We propose that canopy level PRI measurements can be more useful in areas of dense vegetation and dark soils.     

Evaluation of hyperspectral indices for LAI estimation and discrimination of potato crop under different irrigation treatments

In this study, various hyperspectral indices were evaluated for estimation of leaf area index (LAI) and crop discrimination under different irrigation treatments. The study was conducted for potato crop using the spectral reflectance values measured by a hand‐held spectro‐radiometer. Three categories of hyperspectral indices, such as ratio/difference indices, multivariate indices and derivative based indices were computed. It was found that, among various band combinations for NDVI (normalized difference vegetation index) and SAVI (soil adjusted vegetation index), the band combination of the 780～680, produced highest correlation coefficient with LAI. Among all the forms of LAI and VI empirical relationships, the power and exponential equations had highest R ² and F values. Analysis of variance showed that, hyperspectral indices were found to be more efficient than the LAI to detect the differences among crops under different irrigation treatments. The discriminant analysis produced a set of five most optimum bands to discriminate the crops under three irrigation treatments.     

Water content estimation in vegetation with MODIS reflectance data and model inversion methods

Statistical and radiative-transfer physically based studies have previously demonstrated the relationship between leaf water content and leaf-level reflectance in the near-infrared spectral region. The successful scaling up of such methods to the canopy level requires modeling the effect of canopy structure and viewing geometry on reflectance bands and optical indices used for estimation of water content, such as normalized difference water index (NDWI), simple ratio water index (SRWI) and plant water index (PWI). This study conducts a radiative transfer simulation, linking leaf and canopy models, to study the effects of leaf structure, dry matter content, leaf area index (LAI), and the viewing geometry, on the estimation of leaf equivalent water thickness from canopy-level reflectance. The applicability of radiative transfer model inversion methods to MODIS is studied, investigating its spectral capability for water content estimation. A modeling study is conducted, simulating leaf and canopy MODIS-equivalent synthetic spectra with random input variables to test different inversion assumptions. A field sampling campaign to assess the investigated simulation methods was undertaken for analysis of leaf water content from leaf samples in 10 study sites of chaparral vegetation in California, USA, between March and September 2000. MODIS reflectance data were processed from the same period for equivalent water thickness estimation by model inversion linking the PROSPECT leaf model and SAILH canopy reflectance model. MODIS reflectance data, viewing geometry values, and LAI were used as inputs in the model inversion for estimation of leaf equivalent water thickness, dry matter, and leaf structure. Results showed good correlation between the time series of MODIS-estimated equivalent water thickness and ground measured leaf fuel moisture (LFM) content (r²=0.7), demonstrating that these inversion methods could potentially be used for global monitoring of leaf water content in vegetation.     

Canopy spectral invariants for remote sensing and model applications

The concept of canopy spectral invariants expresses the observation that simple algebraic combinations of leaf and canopy spectral transmittance and reflectance become wavelength independent and determine a small set of canopy structure specific variables. This set includes the canopy interceptance, the recollision and the escape probabilities. These variables specify an accurate relationship between the spectral response of a vegetation canopy to the incident solar radiation at the leaf and the canopy scale and allow for a simple and accurate parameterization for the partitioning of the incoming radiation into canopy transmission, reflection and absorption at any wavelength in the solar spectrum. This paper presents a solid theoretical basis for spectral invariant relationships reported in literature with an emphasis on their accuracies in describing the shortwave radiative properties of the three-dimensional vegetation canopies. The analysis of data on leaf and canopy spectral transmittance and reflectance collected during the international field campaign in Flakaliden, Sweden, June 25-July 4, 2002 supports the proposed theory. The results presented here are essential to both modeling and remote sensing communities because they allow the separation of the structural and radiometric components of the measured/modeled signal. The canopy spectral invariants offer a simple and accurate parameterization for the shortwave radiation block in many global models of climate, hydrology, biogeochemistry, and ecology. In remote sensing applications, the information content of hyperspectral data can be fully exploited if the wavelength-independent variables can be retrieved, for they can be more directly related to structural characteristics of the three-dimensional vegetation canopy.     

Soil and Sun angle interactions on partial canopy spectra

Abstract

The spectral behaviour of an incomplete cotton canopy was analysed in relation to solar zenith angle and soil background variations. Soil and vegetation spectral contributions towards canopy response were separated using a first-order interactive model and consequently used to compare the relative sensitivity of canopy spectra to soil background and solar angle differences. Canopy reflectance behaviour with solar angle increased, decreased or remained invariant depending on the reflectance properties of the underlying soil. Sunlit and shaded soil contributions were found to alter vegetation index behaviour significantly over different Sun angles.     

Towards the Remote Sensing of Matorral Vegetation Physiology: Relationships between Spectral Reflectance, Pigment, and Biophysical Characteristics of Semiarid Bushland Canopies

This study investigates the relationships between the spectral reflectance characteristics and the concentrations of photosynthetic pigments and biophysical attributes of a structurally complex, spatially heterogeneous vegetation canopy with varying background properties. A field experiment was performed in the Guadalentin basin, Spain using matorral vegetation canopies dominated by Rosmarinus officinalis, Cistus albidus, and Anthyllis cytosoides. A spectroradiometer was used to record the reflectance of a series of sites at which measurements were made of the concentrations per unit ground area and per unit leaf mass of chlorophyll a and b and the carotenoids, together with leaf area index and percent canopy cover. A range of spectral characteristics was examined which have been found previously to be related to pigment concentrations and biophysical properties of vegetation. For matorral vegetation many of these spectral characteristics were unrelated or only weakly related to canopy properties. However, it was found that pigment concentrations per unit ground area were related to ratios of reflectance in narrow spectral bands within the near-infrared region, ratios of bands within the red region, and characteristics of the amplitude of first derivative spectra in the red edge region. Pigment concentrations per unit leaf mass were correlated with ratios of bands around the nearinfrared “shoulder” and the amplitude of the first derivative in certain visible wavelengths. LAI and percent cover were related to ratios of reflectance in narrow bands on the near-infrared plateau and red edge features of canopy reflectance spectra, as well as with the amplitude of the first derivative in the red edge and visible regions respectively.     

南京冬季典型植被光谱特征分析

利用FieldSpec4便携式地物光谱仪和ASD积分球,于2014年7月和12月对研究区6种典型植被进行光谱数据采集与处理,分析植被冠层和落叶的光谱特征及其变化规律,同时分析坡度因素、测量方法对植被光谱反射率的影响。结果表明:不同季节常绿植被光谱存在差异,不同植被光谱反射率的季节变化也不同。冬季常绿植被具有相似的光谱特征,但是不同植被类型之间也存在明显的差异。冬季植被冠层光谱呈现出先降低后稳定的特点;植被落叶层光谱由于受叶片色素、含水量、土壤背景等因素的影响,在衰老腐化的过程中并未出现明显的规律性变化。一定坡度范围内,植被光谱反射率随坡度的增大而升高。不同的测量方法获取的植被光谱反射率不同,但是光谱变化规律相同。     

Canopy blockage and scattering effects on apparent soil spectral reflectance and its consequence in spectral mixture analysis of vegetated surfaces

Remote sensing technique has become the most efficient and common approach to estimate surface vegetation cover. Among various remote sensing algorithms, spectral mixture analysis (SMA) is the most common approach to obtain sub‐pixel surface coverage. In the SMA, spectral endmembers (the number of endmembers may vary), with invariant spectral reflectance across the whole image, are needed to conduct the mixture procedure. Although the nonlinear effect in quantifying vegetation spectral reflectance was noticed and sometimes addressed in the SMA analysis, the nonlinear effect in soil spectral reflectance is seldom discussed in the literature. In this paper, we investigate the effects of vegetation canopy on the inter‐canopy soil spectral reflectance via mathematical modelling and field measurements. We identify two mechanisms that lead to the difference between remotely sensed apparent soil spectral reflectance and actual soil spectral reflectance. One is a canopy blockage effect, leading to a reduced apparent soil spectral reflectance. The other is a canopy scattering effect, leading to an increased apparent soil spectral reflectance. Without correction, the first (second) mechanism causes an overestimated (underestimated) areal coverage of the low‐spectral‐reflectance endmember. The overall effect of canopy to soil, however, tends to overestimate fractional vegetation cover due to the relative significance of the canopy blockage effect, even though the two mechanisms vary with spectral wavelengths and spectral difference between different vegetation and soil. For the SMA of vegetated surface using multiple‐spectral remote sensing imagery (e.g., LandSat), it is recommended that infrared bands of low vegetation spectral reflectance (e.g. band 7) be first considered; if both visible and infrared bands are used, combination of bands 3, 4, and 5 is appropriate, while use of all six bands could overestimate fraction vegetation cover.     

Spectral reflectance of dehydrating leaves: Measurements and modelling

Remotely sensed measurements at optical wavelengths may provide information on crop water status and increase the accuracy of crop production forecasts. Previous research has shown that canopy spectral response to water stress is attributable to change in leaf water content, canopy structure and soil moisture. This experiment was designed to study leaf spectral response resulting from changes in leaf water content and to evaluate the use of a radiative transfer model for predicting the spectral behaviour of the leaf. The difference between measured and modelled reflectance increased as leaf water content decreased and it was hypothesized that this may be due to a change in leaf internal structure that was unaccounted for by the model.