一种基于语义的协同工作模型

针对产品制造领域,提出一种基于语义的协同工作模型。该模型分别以XML和RDF(S)作为协同信息的语法描述模式和语义描述模型,为协同信息提供机器呵处理和可理解能力;通过建立由个体Ontology和顶层Ontology构成的两层Ontology体系,以个体Ontology描述协同过程中个人或团体的领域背景知识,以顶层Ontology为概念和语义参照模型,建立协同信息之间的语义约束,为协同过程提供多领域知识共享和互操作环境。     

Semantic Similarity between Ontologies at Different Scales

In the past decade, existing and new knowledge and datasets have been encoded in different ontologies for semantic web and biomedical research. The size of ontologies is often very large in terms of number of concepts and relationships, which makes the analysis of ontologies and the represented knowledge graph computational and time consuming. As the ontologies of various semantic web and biomedical applications usually show explicit hierarchical structures, it is interesting to explore the trade-offs between ontological scales and preservation/precision of results when we analyze ontologies. This paper presents the first effort of examining the capability of this idea via studying the relationship between scaling biomedical ontologies at different levels and the semantic similarity values. We evaluate the semantic similarity between three gene ontology slims (plant, yeast, and candida, among which the latter two belong to the same kingdom - fungi) using four popular measures commonly applied to biomedical ontologies (Resnik, Lin, Jiang-Conrath, and SimRel). The results of this study demonstrate that with proper selection of scaling levels and similarity measures, we can significantly reduce the size of ontologies without losing substantial detail. In particular, the performances of Jiang- Conrath and Lin are more reliable and stable than that of the other two in this experiment, as proven by 1) consistently showing that yeast and candida are more similar (as compared to plant) at different scales, and 2) small deviations of the similarity values after excluding a majority of nodes from several lower scales. This study provides a deeper understanding of the application of semantic similarity to biomedical ontologies, and shed light on how to choose appropriate semantic similarity measures for biomedical engineering.      

一种本体知识文摘方法的研究和实现

本体作为领域知识的表示方法，已经成为语义Web的基础。本体通常由领域专家建立，用于表示领域中概念以及概念与概念之间的关系。但这也使得普通用户难以理解本体中描述的信息。普通用户往往希望本体中的信息能够以自然语言的形式描述。这正是本文讨论的主要问题。本文采用分治策略，利用基于嵌套复杂模板的解决方案，设计并实现了本体知识文摘的算法。我们开发了一个原型系统SWARMS，并将该文摘算法进行了运用。初步的实验表明，本文提出的方法取得较好的结果。     

Evaluating ontologies: Towards a cognitive measure of quality

Ontologies are formal specifications of shared conceptualizations of a domain. Important applications of ontologies include distributed knowledge-based systems, such as the semantic web, and the evaluation of modelling languages, e.g. for business process or conceptual modelling. These applications require formal ontologies of good quality. The quality of a formal ontology requires both a good conceptualization of a domain and a good specification of the conceptualization. In this paper, we focus on the latter aspect, and present a method to test how well a specification of a formal ontology corresponds to a conceptualization of a domain held by ontology users. Our experimental method is based on principles of cognitive psychology. We present two experiments to demonstrate our method using upper-level ontologies.     

基于领域知识重用的虚拟领域本体构造

提出了一种重用现有领域知识库知识构造新领域本体的方法.该方法充分利用了领域知识模型以及领域本体相互之间存在的语义相关性,从语义匹配的角度探讨了构造新领域本体的可能性.首先给出了领域本体的一种结构化定义,然后讨论了领域模型之间、领域本体之间存在的语义相关性,并给出了领域本体语义相关度的概念.以此为基础,重点讨论了基于生物种群进化方法构造新领域本体的选择、克隆、变异、杂交、合成和转基因方法.最后详细介绍了一个虚拟领域本体构造系统,并给出了具体分析实例.     

Using Bayesian decision for ontology mapping

Ontology mapping is the key point to reach interoperability over ontologies. In semantic web environment, ontologies are usually distributed and heterogeneous and thus it is necessary to find the mapping between them before processing across them. Many efforts have been conducted to automate the discovery of ontology mapping. However, some problems are still evident. In this paper, ontology mapping is formalized as a problem of decision making. In this way, discovery of optimal mapping is cast as finding the decision with minimal risk. An approach called Risk Minimization based Ontology Mapping (RiMOM) is proposed, which automates the process of discoveries on 1:1, n:1, 1:null and null:1 mappings. Based on the techniques of normalization and NLP, the problem of instance heterogeneity in ontology mapping is resolved to a certain extent. To deal with the problem of name conflict in mapping process, we use thesaurus and statistical technique. Experimental results indicate that the proposed method can significantly outperform the baseline methods, and also obtains improvement over the existing methods.     

An ontology-based framework to support intelligent data analysis of sensor measurements

In the past years, the large availability of sensed data highlighted the need of computer-aided systems that perform intelligent data analysis (IDA) over the obtained data streams. Temporal abstractions (TAs) are key to interpret the principle encoded within the data, but their usefulness depends on an efficient management of domain knowledge. In this article, an ontology-based framework for IDA is presented. It is based on a knowledge model composed by two existing ontologies (Semantic Sensor Network ontology (SSN), SWRL Temporal Ontology (SWRLTO)) and a new developed one: the Temporal Abstractions Ontology (TAO). SSN conceptualizes sensor measurements, thus enabling a full integration with semantic sensor web (SSW) technologies. SWRLTO provides temporal modeling and reasoning. TAO has been designed to capture the semantic of TAs. These ontologies have been aligned through DOLCE Ultra-Lite (DUL) upper ontology, boosting the integration with other domains. The resulting knowledge model has a modular design that facilitates the integration, exchange and reuse of its constitutive parts. The framework is sketched in a chemical plant case study. It is shown how complex temporal patterns that combine several variables and representation schemes can be used to infer process states and/or conditions.     

Extending the Unified Modeling Language for ontology development

There is rapidly growing momentum for web enabled agents that reason about and dynamically integrate the appropriate knowledge and services at run-time. The dynamic integration of knowledge and services depends on the existence of explicit declarative semantic models (ontologies). We have been building tools for ontology development based on the Unified Modeling Language (UML). This allows the many mature UML tools, models and expertise to be applied to knowledge representation systems, not only for visualizing complex ontologies but also for managing the ontology development process. UML has many features, such as profiles, global modularity and extension mechanisms that are not generally available in most ontology languages. However, ontology languages have some features that UML does not support. Our paper identifies the similarities and differences (with examples) between UML and the ontology languages RDF and DAML+OIL. To reconcile these differences, we propose a modification to the UML metamodel to address some of the most problematic differences. One of these is the ontological concept variously called a property, relation or predicate. This notion corresponds to the UML concepts of association and attribute. In ontology languages properties are first-class modeling elements, but UML associations and attributes are not first-class. Our proposal is backward-compatible with existing UML models while enhancing its viability for ontology modeling. While we have focused on RDF and DAML+OIL in our research and development activities, the same issues apply to many of the knowledge representation languages. This is especially the case for semantic network and concept graph approaches to knowledge representations. Initial sbmission: 16 February 2002 / Revised submission: 15 October 2002 Published online: 2 December 2002     

基于本体集成的语义标注模型设计

语义Web的全面实现需借助于语义标注,标注网页信息会涉及到多个本体.据此,通过研究桥本体,提出一个在本体集成的基础上建立起来的多本体语义标注模型.该模型利用桥本体集成顶层本体和多个领域本体,同时借助基于本体的信息抽取技术对网页进行语义标注,并将标注信息存入标注库,使标注信息与网页分离,提高语义检索的效率.通过举例说明了本模型的合理性.     

基于机器学习的本体集成框架

语义服务是下一代Web服务面临的关键问题．语义网为实现广泛的语义服务提供了可能,Ontology是语义网体系结构的核心。针对协作的分布式系统需要语义互联的问题,本文分析了造成语义互联困难的主要因素是本体的匹配和集成,提出了一个基于机器学习的Ontology集成的框架模型。     

Modeling Incomplete Knowledge of Semantic Web Using Bayesian Networks

ABSTRACT

Interoperable ontologies already exist in the biomedical field, enabling scientists to communicate with minimum ambiguity. Unfortunately, ontology languages, in the semantic web, such as OWL and RDF(S), are based on crisp logic and thus they cannot handle uncertain knowledge about an application field, which is unsuitable for the medical domain. In this paper, we focus on modeling incomplete knowledge in the classical OWL ontologies, using Bayesian networks, all keeping the semantic of the first ontology, and applying algorithms dedicated to learn parameters of Bayesian networks in order to generate the Bayesian networks. We use EM algorithm for learning conditional probability tables of different nodes of Bayesian network automatically, contrary to different tools of Bayesian networks where probabilities are inserted manually. To validate our work, we have applied our model on the diagnosis of liver cancer using classical ontology containing incomplete instances, in order to handle medical uncertain knowledge, for predicting a liver cancer.     

A high-level electrical energy ontology with weighted attributes

One of the significant application areas of domain ontologies is known to be text analysis applications like information extraction and text classification systems, and semantic portals. In this paper, we present a high-level ontology for the electrical energy domain. This domain ontology has weighted attributes to cover the inherent fuzziness in the textual representations of its concepts. Additionally, we have included in the ontology the necessary attributes to align the ontology concepts to on-line collaborative knowledge bases like Wikipedia and linked open data sources like DBpedia, other attributes to facilitate its use in multilingual applications, and concepts to hold the named entities in the domain. The ultimate ontology is aligned with the previously proposed ontologies for the energy-related subdomains after extending the latter ones with weighted attributes. We make the ultimate form of the electrical energy ontology, as well as the extended versions of the domain ontologies for the subdomains, available for research purposes. Also included in the paper are sample text analysis applications which mainly exploit the weighted attributes within the ontology.     

On Capturing Semantics in Ontology Mapping

Semantic interoperability between disparate systems in open, distributed environments has become the quest of many practitioners in a variety of fields. One way to achieve such a goal is through ontology mapping. The perspective users of such technology, however, are faced with a number of challenges including ambiguity of the meaning of mappings, difficulties of capturing semantics, choice of the right ontology mapping tools, verification and validation of results and operationalisation in the beneficiary semantic web application. In this paper we present a formalisation of ontologies and a triangle model for the ontology mapping problems. This formalisation of ontology mapping reflects the engineering steps needed to materialise a versatile mapping system in order to faithfully re-capture the semantics embodied in ontologies which is the fundamental requirements posed by the semantic web environment. We further accommodate this formalisation with a series of specialist algorithms targeting at particular aspects of semantic capturing. Finally, we evaluated the proposed algorithms by way of ontology mapping benchmark tests.     

Ontology selection ranking model for knowledge reuse

Ontology reuse is recommended as a key factor to develop cost-effective and high-quality ontologies because it could reduce development costs by avoiding rebuilding existing ontologies. Selecting the desired ontology from existing ontologies is essential for ontology reuse. Until now, much research on ontology selection has focused on lexical-level support. However, in these cases, it is almost impossible to find an ontology that includes all the concepts matched by the search terms at the semantic level. Finding an ontology that meets users’ needs requires a new ontology selection and ranking mechanism based on semantic similarity matching. We propose an ontology selection and ranking model consisting of selection standards and metrics based on better semantic matching capabilities. The model we propose presents two novel features different from previous research models. First, it enhances the ontology selection and ranking method practically and effectively by enabling semantic matching of taxonomy or relational linkage between concepts. Second, it identifies what measures should be used to rank ontologies in the given context and what weight should be assigned to each selection measure.     

MOVE: A Distributed Framework for Materialized Ontology View Extraction

The use of ontologies lies at the very heart of the newly emerging era of semantic web. Ontologies provide a shared conceptualization of some domain that may be communicated between people and application systems. As information on the web increases significantly in size, web ontologies also tend to grow bigger, to such an extent that they become too large to be used in their entirety by any single application. Moreover, because of the size of the original ontology, the process of repeatedly iterating the millions of nodes and relationships to form an optimized sub-ontology becomes very computationally extensive. Therefore, it is imperative that parallel and distributed computing techniques be utilized to implement the extraction process. These problems have stimulated our work in the area of sub-ontology extraction where each user may extract optimized sub-ontologies from an existing base ontology. The extraction process consists of a number of independent optimization schemes that cover various aspects of the optimization process, such as ensuring consistency of the user-specified requirements for the sub-ontology, ensuring semantic completeness of the sub-ontology, etc. Sub-ontologies are valid independent ontologies, known as materialized ontologies, that are specifically extracted to meet certain needs. Our proposed and implemented framework for the extraction process, referred to as Materialized Ontology View Extractor (MOVE), has addressed this problem by proposing a distributed architecture for the extraction/optimization of a sub-ontology from a large-scale base ontology. We utilize coarse-grained data-level parallelism inherent in the problem domain. Such an architecture serves two purposes: (a) facilitates the utilization of a cluster environment typical in business organizations, which is in line with our envisaged application of the proposed system, and (b) enhances the performance of the computationally extensive extraction process when dealing with massively sized realistic ontologies. As ontologies are currently widely used, our proposed approach for distributed ontology extraction will play an important role in improving the efficiency of ontology-based information retrieval.     

ANEMONE: An environment for modular ontology development

Many real-world ontologies contain thousands of terms and are developed by multiple participants. The use of monolithic ontologies can cause problems that affect various stages of the ontology life cycle. Thus, there is an urgent need for tools and methodologies that facilitate modular ontology design. The benefits of a modular approach include division of labor, scalability, partial reuse, and broadened participation. This article presents a methodology for modular ontology development. The main idea is to facilitate an interoperable hierarchical network of ontology modules. Modules are designed as a combination of more abstract modules in higher levels of the hierarchy. This methodology differs from previous methodologies in the way that it defines concrete development steps, to facilitate use by both naive and expert ontology developers. This methodology is also supported by ontology design patterns and a prototypical ontology development tool.     

Terminological ontology learning and population using latent Dirichlet allocation

The success of Semantic Web will heavily rely on the availability of formal ontologies to structure machine understanding data. However, there is still a lack of general methodologies for ontology automatic learning and population, i.e. the generation of domain ontologies from various kinds of resources by applying natural language processing and machine learning techniques In this paper, the authors present an ontology learning and population system that combines both statistical and semantic methodologies. Several experiments have been carried out, demonstrating the effectiveness of the proposed approach.     

A semantic metrics suite for evaluating modular ontologies

Ontologies, which are formal representations of knowledge within a domain, can be used for designing and sharing conceptual models of enterprises information for the purpose of enhancing understanding, communication and interoperability. For representing a body of knowledge, different ontologies may be designed. Recently, designing ontologies in a modular manner has emerged for achieving better reasoning performance, more efficient ontology management and change handling. One of the important challenges in the employment of ontologies and modular ontologies in modeling information within enterprises is the evaluation of the suitability of an ontology for a domain and the performance of inference operations over it. In this paper, we present a set of semantic metrics for evaluating ontologies and modular ontologies. These metrics measure cohesion and coupling of ontologies, which are two important notions in the process of assessing ontologies for enterprise modeling. The proposed metrics are based on semantic-based definitions of relativeness, and dependencies between local symbols, and also between local and external symbols of ontologies. Based on these semantic definitions, not only the explicitly asserted knowledge in ontologies but also the implied knowledge, which is derived through inference, is considered for the sake of ontology assessment. We present several empirical case studies for investigating the correlation between the proposed metrics and reasoning performance, which is an important issue in applicability of employing ontologies in real-world information systems.