Parameterized Measure & Conquer for Problems with No Small Kernels

Measure & Conquer (M&C) is a prominent technique for analyzing exact algorithms for computationally hard problems, in particular, graph problems. It tries to balance worse and better situations within the algorithm analysis. This has led, e.g., to algorithms for Minimum Vertex Cover with a running time of $\mathcal{O}(c^{n})$ for some constant c??1.2, where n is the number of vertices in the graph. Several obstacles prevent the application of this technique in parameterized algorithmics, making it rarely applied in this area. However, these difficulties can be handled in some situations. We will exemplify this with two problems related to Vertex Cover, namely Connected Vertex Cover and Edge Dominating Set. For both problems, several parameterized algorithms have been published, all based on the idea of first enumerating minimal vertex covers. Using M&C in this context will allow us to improve on the hitherto published running times. In contrast to some of the earlier suggested algorithms, ours will use polynomial space.     

Vertex Cover Kernelization Revisited

An important result in the study of polynomial-time preprocessing shows that there is an algorithm which given an instance (G,k) of Vertex Cover outputs an equivalent instance (G′,k′) in polynomial time with the guarantee that G′ has at most 2k′ vertices (and thus $\mathcal{O}((k')^{2})$ edges) with k′≤k. Using the terminology of parameterized complexity we say that k-Vertex Cover has a kernel with 2k vertices. There is complexity-theoretic evidence that both 2k vertices and Θ(k ²) edges are optimal for the kernel size. In this paper we consider the Vertex Cover problem with a different parameter, the size $\mathop{\mathrm{\mbox{\textsc{fvs}}}}(G)$ of a minimum feedback vertex set for G. This refined parameter is structurally smaller than the parameter k associated to the vertex covering number $\mathop{\mathrm{\mbox {\textsc{vc}}}}(G)$ since $\mathop{\mathrm{\mbox{\textsc{fvs}}}}(G)\leq\mathop{\mathrm{\mbox{\textsc{vc}}}}(G)$ and the difference can be arbitrarily large. We give a kernel for Vertex Cover with a number of vertices that is cubic in $\mathop{\mathrm{\mbox{\textsc{fvs}}}}(G)$ : an instance (G,X,k) of Vertex Cover, where X is a feedback vertex set for G, can be transformed in polynomial time into an equivalent instance (G′,X′,k′) such that |V(G′)|≤2k and $|V(G')| \in\mathcal{O}(|X'|^{3})$ . A similar result holds when the feedback vertex set X is not given along with the input. In sharp contrast we show that the Weighted Vertex Cover problem does not have a polynomial kernel when parameterized by the cardinality of a given vertex cover of the graph unless NP ? coNP/poly and the polynomial hierarchy collapses to the third level.     

On Cutwidth Parameterized by Vertex Cover

We study the Cutwidth problem, where the input is a graph G, and the objective is find a linear layout of the vertices that minimizes the maximum number of edges intersected by any vertical line inserted between two consecutive vertices. We give an algorithm for Cutwidth with running time O(2 ^k n ^O(1)). Here k is the size of a minimum vertex cover of the input graph G, and n is the number of vertices in G. Our algorithm gives an O(2 ^n/2 n ^O(1)) time algorithm for Cutwidth on bipartite graphs as a corollary. This is the first non-trivial exact exponential time algorithm for Cutwidth on a graph class where the problem remains NP-complete. Additionally, we show that Cutwidth parameterized by the size of the minimum vertex cover of the input graph does not admit a polynomial kernel unless NP?coNP/poly. Our kernelization lower bound contrasts with the recent results of Bodlaender et al. (ICALP, Springer, Berlin, 2011; SWAT, Springer, Berlin, 2012) that both Treewidth and Pathwidth parameterized by vertex cover do admit polynomial kernels.     

A Polynomial Kernel for Feedback Arc Set on Bipartite Tournaments

In the k-Feedback Arc/Vertex Set problem we are given a directed graph D and a positive integer k and the objective is to check whether it is possible to delete at most k arcs/vertices from D to make it acyclic. Dom et al. (J. Discrete Algorithm 8(1):76–86, 2010) initiated a study of the Feedback Arc Set problem on bipartite tournaments (k-FASBT) in the realm of parameterized complexity. They showed that k-FASBT can be solved in time O(3.373 ^k n ⁶) on bipartite tournaments having n vertices. However, until now there was no known polynomial sized problem kernel for k-FASBT. In this paper we obtain a cubic vertex kernel for k-FASBT. This completes the kernelization picture for the Feedback Arc/Vertex Set problem on tournaments and bipartite tournaments, as for all other problems polynomial kernels were known before. We obtain our kernel using a non-trivial application of “independent modules” which could be of independent interest.     

Greedy Δ-Approximation Algorithm for Covering with Arbitrary Constraints and Submodular Cost

This paper describes a simple greedy Δ-approximation algorithm for any covering problem whose objective function is submodular and non-decreasing, and whose feasible region can be expressed as the intersection of arbitrary (closed upwards) covering constraints, each of which constrains at most Δ variables of the problem. (A simple example is Vertex Cover, with Δ=2.) The algorithm generalizes previous approximation algorithms for fundamental covering problems and online paging and caching problems.     

The Parameterized Complexity of Stabbing Rectangles

The NP-complete geometric covering problem Rectangle Stabbing is defined as follows: Given a set R of axis-parallel rectangles in the plane, a set L of horizontal and vertical lines in the plane, and a positive integer k, select at most k of the lines such that every rectangle is intersected by at least one of the selected lines. While it is known that the problem can be approximated in polynomial time within a factor of two, its parameterized complexity with respect to the parameter k was open so far. Giving two fixed-parameter reductions, one from the W[1]-complete problem Multicolored Clique and one to the W[1]-complete problem Short Turing Machine Acceptance, we prove that Rectangle Stabbing is W[1]-complete with respect to the parameter k, which in particular means that there is no hope for an algorithm running in f(k)?|R∪L| ^O(1) time. Our reductions also show the W[1]-completeness of the more general problem Set Cover on instances that “almost have the consecutive-ones property”, that is, on instances whose matrix representation has at most two blocks of 1s per row. We also show that the special case of Rectangle Stabbing where all rectangles are squares of the same size is W[1]-hard. The case where the input consists of non-overlapping rectangles was open for some time and has recently been shown to be fixed-parameter tractable (Heggernes et al., Fixed-parameter algorithms for cochromatic number and disjoint rectangle stabbing, 2009). By giving an algorithm running in (2k) ^k ?|R∪L| ^O(1) time, we show that Rectangle Stabbing is fixed-parameter tractable in the still NP-hard case where both these restrictions apply, that is, in the case of disjoint squares of the same size. This algorithm is faster than the one in Heggernes et al. (Fixed-parameter algorithms for cochromatic number and disjoint rectangle stabbing, 2009) for the disjoint rectangles case. Moreover, we show fixed-parameter tractability for the restrictions where the rectangles have bounded width or height or where each horizontal line intersects only a bounded number of rectangles.     

Contracting Graphs to Paths and Trees

Vertex deletion and edge deletion problems play a central role in parameterized complexity. Examples include classical problems like Feedback Vertex Set, Odd Cycle Transversal, and Chordal Deletion. The study of analogous edge contraction problems has so far been left largely unexplored from a parameterized perspective. We consider two basic problems of this type: Tree Contraction and Path Contraction. These two problems take as input an undirected graph G on n vertices and an integer k, and the task is to determine whether we can obtain a tree or a path, respectively, by a sequence of at most k edge contractions in G. For Tree Contraction, we present a randomized 4 ^k ? n ^O(1) time polynomial-space algorithm, as well as a deterministic 4.98 ^k ? n ^O(1) time algorithm, based on a variant of the color coding technique of Alon, Yuster and Zwick. We also present a deterministic 2 ^k+o(k)+n ^O(1) time algorithm for Path Contraction. Furthermore, we show that Path Contraction has a kernel with at most 5k+3 vertices, while Tree Contraction does not have a polynomial kernel unless NP ? coNP/poly. We find the latter result surprising because of the connection between Tree Contraction and Feedback Vertex Set, which is known to have a kernel with 4k ² vertices.     

Polynomial Kernelizations for MIN F+Π1 and MAX NP

It has been observed in many places that constant-factor approximable problems often admit polynomial or even linear problem kernels for their decision versions, e.g., Vertex Cover, Feedback Vertex Set, and Triangle Packing. While there exist examples like Bin Packing, which does not admit any kernel unless P = NP, there apparently is a strong relation between these two polynomial-time techniques. We add to this picture by showing that the natural decision versions of all problems in two prominent classes of constant-factor approximable problems, namely MIN F⁺Π₁ and MAX NP, admit polynomial problem kernels. Problems in MAX SNP, a subclass of MAX NP, are shown to admit kernels with a linear base set, e.g., the set of vertices of a graph. This extends results of Cai and Chen (J. Comput. Syst. Sci. 54(3): 465–474, 1997), stating that the standard parameterizations of problems in MAX SNP and MIN F⁺Π₁ are fixed-parameter tractable, and complements recent research on problems that do not admit polynomial kernelizations (Bodlaender et al. in J. Comput. Syst. Sci. 75(8): 423–434, 2009).     

Improved Algorithms and Complexity Results for Power Domination in Graphs

The NP-complete Power Dominating Set problem is an “electric power networks variant” of the classical domination problem in graphs: Given an undirected graph G=(V,E), find a minimum-size set P?V such that all vertices in V are “observed” by the vertices in P. Herein, a vertex observes itself and all its neighbors, and if an observed vertex has all but one of its neighbors observed, then the remaining neighbor becomes observed as well. We show that Power Dominating Set can be solved by “bounded-treewidth dynamic programs.” For treewidth being upper-bounded by a constant, we achieve a linear-time algorithm. In particular, we present a simplified linear-time algorithm for Power Dominating Set in trees. Moreover, we simplify and extend several NP-completeness results, particularly showing that Power Dominating Set remains NP-complete for planar graphs, for circle graphs, and for split graphs. Specifically, our improved reductions imply that Power Dominating Set parameterized by |P| is W[2]-hard and it cannot be better approximated than Dominating Set.     

Proper Interval Vertex Deletion

The NP-complete problem Proper Interval Vertex Deletion is to decide whether an input graph on n vertices and m edges can be turned into a proper interval graph by deleting at most k vertices. Van Bevern et al. (In: Proceedings WG 2010. Lecture notes in computer science, vol. 6410, pp. 232–243, 2010) showed that this problem can be solved in $\mathcal {O}((14k +14)^{k+1} kn^{6})$ time. We improve this result by presenting an $\mathcal {O}(6^{k} kn^{6})$ time algorithm for Proper Interval Vertex Deletion. Our fixed-parameter algorithm is based on a new structural result stating that every connected component of a {claw,net,tent,C ₄,C ₅,C ₆}-free graph is a proper circular arc graph, combined with a simple greedy algorithm that solves Proper Interval Vertex Deletion on {claw,net,tent,C ₄,C ₅,C ₆}-free graphs in $\mathcal {O}(n+m)$ time. Our approach also yields a polynomial-time 6-approximation algorithm for the optimization variant of Proper Interval Vertex Deletion.     

Approximation and Tidying—A Problem Kernel for?s-Plex Cluster Vertex Deletion

We introduce the NP-hard graph-based data clustering problem s-Plex Cluster Vertex Deletion, where the task is to delete at most?k vertices from a graph so that the connected components of the resulting graph are s-plexes. In an s-plex, every vertex has an edge to all but at most s?1?other vertices; cliques are 1-plexes. We propose a new method based on “approximation and tidying” for kernelizing vertex deletion problems whose goal graphs can be characterized by forbidden induced subgraphs. The method exploits polynomial-time approximation results and thus provides a useful link between approximation and kernelization. Employing “approximation and tidying”, we develop data reduction rules that, in?O(ksn ²) time, transform an s-Plex Cluster Vertex Deletion instance with n vertices into an equivalent instance with O(k ² s ³)?vertices, yielding a problem kernel. To this end, we also show how to exploit structural properties of the specific problem in order to significantly improve the running time of the proposed kernelization method.     

DP-Fair: a unifying theory for optimal hard real-time multiprocessor scheduling

We consider the problem of optimal real-time scheduling of periodic and sporadic tasks on identical multiprocessors. A number of recent papers have used the notions of fluid scheduling and deadline partitioning to guarantee optimality and improve performance. This article develops a unifying theory with the DP-Fair scheduling policy and examines how it overcomes problems faced by greedy scheduling algorithms. In addition, we present DP-Wrap, a simple DP-Fair scheduling algorithm which serves as a least common ancestor to other recent algorithms. The DP-Fair scheduling policy is extended to address the problem of scheduling sporadic task sets with arbitrary deadlines.     

Evolutionary Algorithms for Quantum Computers

In this article, we formulate and study quantum analogues of randomized search heuristics, which make use of Grover search (in Proceedings of the 28th Annual ACM Symposium on Theory of Computing, pp. 212–219. ACM, New York, 1996) to accelerate the search for improved offsprings. We then specialize the above formulation to two specific search heuristics: Random Local Search and the (1+1) Evolutionary Algorithm. We call the resulting quantum versions of these search heuristics Quantum Local Search and the (1+1) Quantum Evolutionary Algorithm. We conduct a rigorous runtime analysis of these quantum search heuristics in the computation model of quantum algorithms, which, besides classical computation steps, also permits those unique to quantum computing devices. To this end, we study the six elementary pseudo-Boolean optimization problems OneMax, LeadingOnes, Discrepancy, Needle, Jump, and TinyTrap. It turns out that the advantage of the respective quantum search heuristic over its classical counterpart varies with the problem structure and ranges from no speedup at all for the problem Discrepancy to exponential speedup for the problem TinyTrap. We show that these runtime behaviors are closely linked to the probabilities of performing successful mutations in the classical algorithms.     

Small Vertex Cover makes Petri Net Coverability and Boundedness Easier

The coverability and boundedness problems for Petri nets are known to be Expspace-complete. Given a Petri net, we associate a graph with it. With the vertex cover number k of this graph and the maximum arc weight W as parameters, we show that coverability and boundedness are in ParaPspace. This means that these problems can be solved in space $\mathcal{O} ({\mathit{ef}}(k, W){\mathit{poly}}(n) )$ , where ef(k,W) is some super-polynomial function and poly(n) is some polynomial in the size of the input n. We then extend the ParaPspace result to model checking a logic that can express some generalizations of coverability and boundedness.     

An Improved FPT Algorithm and a Quadratic Kernel for Pathwidth One Vertex Deletion

The Pathwidth One Vertex Deletion (POVD) problem asks whether, given an undirected graph?G and an integer k, one can delete at most k vertices from?G so that the remaining graph has pathwidth at most 1. The question can be considered as a natural variation of the extensively studied Feedback Vertex Set (FVS) problem, where the deletion of at most k vertices has to result in the remaining graph having treewidth at most 1 (i.e., being a forest). Recently Philip et?al. (WG, Lecture Notes in Computer Science, vol.?6410, pp.?196?C207, 2010) initiated the study of the parameterized complexity of POVD, showing a quartic kernel and an algorithm which runs in time 7 ^k n ^O(1). In this article we improve these results by showing a quadratic kernel and an algorithm with time complexity 4.65 ^k n ^O(1), thus obtaining almost tight kernelization bounds when compared to the general result of Dell and van Melkebeek (STOC, pp.?251?C260, ACM, New York, 2010). Techniques used in the kernelization are based on the quadratic kernel for FVS, due to Thomassé (ACM Trans. Algorithms 6(2), 2010).     

A Universal Randomized Packet Scheduling Algorithm

We give a memoryless scale-invariant randomized algorithm ReMix for Packet Scheduling that is e/(e?1)-competitive against an adaptive adversary. ReMix unifies most of previously known randomized algorithms, and its general analysis yields improved performance guarantees for several restricted variants, including the s-bounded instances. In particular, ReMix attains the optimum competitive ratio of 4/3 on 2-bounded instances. Our results are applicable to a more general problem, called Item Collection, in which only the relative order between packets’ deadlines is known. ReMix is the optimal memoryless randomized algorithm against adaptive adversary for that problem.     

Detecting Fixed Patterns in Chordal Graphs in Polynomial Time

The Contractibility problem takes as input two graphs G and H, and the task is to decide whether H can be obtained from G by a sequence of edge contractions. The Induced Minor and Induced Topological Minor problems are similar, but the first allows both edge contractions and vertex deletions, whereas the latter allows only vertex deletions and vertex dissolutions. All three problems are NP-complete, even for certain fixed graphs H. We show that these problems can be solved in polynomial time for every fixed H when the input graph G is chordal. Our results can be considered tight, since these problems are known to be W[1]-hard on chordal graphs when parameterized by the size of H. To solve Contractibility and Induced Minor, we define and use a generalization of the classic Disjoint Paths problem, where we require the vertices of each of the k paths to be chosen from a specified set. We prove that this variant is NP-complete even when k=2, but that it is polynomial-time solvable on chordal graphs for every fixed k. Our algorithm for Induced Topological Minor is based on another generalization of Disjoint Paths called Induced Disjoint Paths, where the vertices from different paths may no longer be adjacent. We show that this problem, which is known to be NP-complete when k=2, can be solved in polynomial time on chordal graphs even when k is part of the input. Our results fit into the general framework of graph containment problems, where the aim is to decide whether a graph can be modified into another graph by a sequence of specified graph operations. Allowing combinations of the four well-known operations edge deletion, edge contraction, vertex deletion, and vertex dissolution results in the following ten containment relations: (induced) minor, (induced) topological minor, (induced) subgraph, (induced) spanning subgraph, dissolution, and contraction. Our results, combined with existing results, settle the complexity of each of the ten corresponding containment problems on chordal graphs.     

Exact Algorithms for Finding Longest Cycles in Claw-Free Graphs

The Hamiltonian Cycle problem is the problem of deciding whether an n-vertex graph G has a cycle passing through all vertices of G. This problem is a classic NP-complete problem. Finding an exact algorithm that solves it in ${\mathcal {O}}^{*}(\alpha^{n})$ time for some constant α<2 was a notorious open problem until very recently, when Björklund presented a randomized algorithm that uses ${\mathcal {O}}^{*}(1.657^{n})$ time and polynomial space. The Longest Cycle problem, in which the task is to find a cycle of maximum length, is a natural generalization of the Hamiltonian Cycle problem. For a claw-free graph G, finding a longest cycle is equivalent to finding a closed trail (i.e., a connected even subgraph, possibly consisting of a single vertex) that dominates the largest number of edges of some associated graph H. Using this translation we obtain two deterministic algorithms that solve the Longest Cycle problem, and consequently the Hamiltonian Cycle problem, for claw-free graphs: one algorithm that uses ${\mathcal {O}}^{*}(1.6818^{n})$ time and exponential space, and one algorithm that uses ${\mathcal {O}}^{*}(1.8878^{n})$ time and polynomial space.     

Cluster Editing: Kernelization Based on Edge Cuts

Kernelization algorithms for the cluster editing problem have been a popular topic in the recent research in parameterized computation. Most kernelization algorithms for the problem are based on the concept of critical cliques. In this paper, we present new observations and new techniques for the study of kernelization algorithms for the cluster editing problem. Our techniques are based on the study of the relationship between cluster editing and graph edge-cuts. As an application, we present a simple algorithm that constructs a 2k-vertex kernel for the integral-weighted version of the cluster editing problem. Our result matches the best kernel bound for the unweighted version of the cluster editing problem, and significantly improves the previous best kernel bound for the weighted version of the problem. For the more general real-weighted version of the problem, our techniques lead to a simple kernelization algorithm that constructs a kernel of at most 4k vertices.     

Para Miner: a generic pattern mining algorithm for multi-core architectures

In this paper, we present Para Miner which is a generic and parallel algorithm for closed pattern mining. Para Miner is built on the principles of pattern enumeration in strongly accessible set systems. Its efficiency is due to a novel dataset reduction technique (that we call EL-reduction), combined with novel technique for performing dataset reduction in a parallel execution on a multi-core architecture. We illustrate Para Miner’s genericity by using this algorithm to solve three different pattern mining problems: the frequent itemset mining problem, the mining frequent connected relational graphs problem and the mining gradual itemsets problem. In this paper, we prove the soundness and the completeness of Para Miner. Furthermore, our experiments show that despite being a generic algorithm, Para Miner can compete with specialized state of the art algorithms designed for the pattern mining problems mentioned above. Besides, for the particular problem of gradual itemset mining, Para Miner outperforms the state of the art algorithm by two orders of magnitude.