共查询到20条相似文献,搜索用时 62 毫秒
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利用稳定同位素标记肽段的质谱绝对定量(AQUA)技术,实现了对5、7和55型人腺病毒的准确鉴定。采用细胞培养条件下稳定同位素代谢标记(SILAC)技术培养细胞至大肠杆菌生长至对数生长期,1 mmol/L异丙基硫代-β-D-半乳糖苷(IPTG)低温诱导蛋白表达,提取并利用谷胱甘肽S转移酶(GST)纯化富集相应标记的腺病毒六邻体蛋白。通过胶消化分别消化三种不同标记策略(非标记、中度标记和重度标记)的纯化蛋白,消化肽段等量混合脱盐后经纳流液相色谱-串联质谱(Nano HPLC-MS/MS)进行定量蛋白分析。通过SILAC实现大肠杆菌的完整代谢标记,诱导表达腺病毒六邻体蛋白,通过AQUA技术实现对非标记、中度标记、重度标记六邻体蛋白标志性肽段鉴定。成功实现SILAC三种不同标记策略条件下大肠杆菌中5、7、55型人腺病毒六邻体蛋白的完整标记,为5、7、55型人腺病毒感染的快速分型检测提供了新的鉴定策略。 相似文献
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Luisa-Gabriela Bogos Ioana-Ecaterina Pralea Radu-Cristian Moldovan Cristina-Adela Iuga 《International journal of molecular sciences》2022,23(13)
Chiral metabolomics is starting to become a well-defined research field, powered by the recent advances in separation techniques. This review aimed to cover the most relevant advances in indirect enantioseparations of endogenous metabolites that were published over the last 10 years, including improvements and development of new chiral derivatizing agents, along with advances in separation methodologies. Moreover, special emphasis is put on exciting advances in separation techniques combined with mass spectrometry, such as chiral discrimination by ion-mobility mass spectrometry together with untargeted strategies for profiling of chiral metabolites in complex matrices. These advances signify a leap in chiral metabolomics technologies that will surely offer a solid base to better understand the specific roles of enantiomeric metabolites in systems biology. 相似文献
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Maxime Rossato Dr. Guillaume Miralles Céline M'Kadmi Dr. Mathieu Maingot Dr. Muriel Amblard Dr. Bernard Mouillac Dr. Didier Gagne Prof. Jean Martinez Prof. Gilles Subra Prof. Christine Enjalbal Dr. Sonia Cantel 《ChemMedChem》2016,11(23):2582-2587
Radiolabeling of ligands is still the gold standard in the study of high‐affinity receptor–ligand interactions. In an effort toward safer and simpler alternatives to the use of radioisotopes, we developed a quantitative and highly sensitive matrix‐assisted laser desorption ionization mass spectrometry (MALDI‐MS) method that relies on the use of chemically tagged ligands designed to be specifically detectable when present as traces in complex biological mixtures such as cellular lysates. This innovative technology allows easy, sensitive detection and accurate quantification of analytes at the sub‐nanomolar level. After statistical validation, we were able to perform pharmacological evaluations of G protein‐coupled receptor (V1A‐R)–ligand interactions. Both saturation and competitive binding assays were successfully processed. 相似文献
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Andrzej Wnorowski Mylaine Tardif David Harnish Gary Poole Chung H. Chiu 《Polycyclic Aromatic Compounds》2013,33(5):313-329
Results from soil, diesel emission and ambient air control particulate matter samples on the determination of 30 PAHs were evaluated to establish whether the use of recovery data would result in an improvement of the quantitation accuracy over the uncorrected data. The performance of the recovery-corrected technique was initially evaluated using recovery results from PAH standard reference material samples spiked with analogue deuterated isotopes. The results showed an excellent correlation between recoveries of natives and corresponding surrogates for all matrices studied. The practical merit of the isotope dilution mass spectrometry technique was further assessed by spiking control samples with corresponding isotopic analogues and comparing the measured concentration of natives obtained with uncorrected and recovery-corrected techniques. The data revealed that the use of recovery correction leads to results closer to the real values, thus decreasing the negative bias due to losses that occur during the analytical process. The mean accuracy difference between uncorrected and corrected data is more pronounced as the sample matrix becomes more complex, such as soil (15 ± 12%) or diesel emission (8 ± 11%), and less for simpler ambient air matrix samples (3 ± 16%). Precision between the two techniques was comparable within each matrix and relatively close between the different matrices. 相似文献
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A heavy crude oil has been treated with deuterated alkylating reagents (CD3I and C2D5I) and directly analyzed without any prior fractionation and chromatographic separation by high-field Orbitrap Fourier Transform Mass Spectrometry (FTMS) and Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FT-ICR MS) using electrospray ionization (ESI). The reaction of a polycyclic aromatic sulfur heterocycles (PASHs) dibenzothiophene (DBT), in the presence of silver tetrafluoroborate (AgBF4) with ethyl iodide (C2H5I) in anhydrous dichloroethane (DCE) was optimized as a sample reaction to study heavy crude oil mixtures, and the reaction yield was monitored and determined by proton nuclear magnetic resonance spectroscopy (1H-NMR). The obtained conditions were then applied to a mixture of standard aromatic CH-, N-, O- and S-containing compounds and then a heavy crude oil, and only sulfur-containing compounds were selectively alkylated. The deuterium labeled alkylating reagents, iodomethane-d3 (CD3I) and iodoethane-d5 (C2D5I), were employed to the alkylation of heavy crude oil to selectively differentiate the tagged sulfur species from the original crude oil. 相似文献
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Fengxia Li Eugenio F. Fornasiero Tal M. Dankovich Verena Kluever Silvio O. Rizzoli 《International journal of molecular sciences》2022,23(9)
Nano secondary ion mass spectrometry (nanoSIMS) imaging is a rapidly growing field in biological sciences, which enables investigators to describe the chemical composition of cells and tissues with high resolution. One of the major challenges of nanoSIMS is to identify specific molecules or organelles, as these are not immediately recognizable in nanoSIMS and need to be revealed by SIMS-compatible probes. Few laboratories have generated such probes, and none are commercially available. To address this, we performed a systematic study of probes initially developed for electron microscopy. Relying on nanoscale SIMS, we found that antibodies coupled to 6 nm gold particles are surprisingly efficient in terms of labeling specificity while offering a reliable detection threshold. These tools enabled accurate visualization and sample analysis and were easily employed in correlating SIMS with other imaging approaches, such as fluorescence microscopy. We conclude that antibodies conjugated to moderately sized gold particles are promising tools for SIMS imaging. 相似文献
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Position‐Specific Mass Shift Analysis: A Systematic Method for Investigating the EI‐MS Fragmentation Mechanism of epi‐Isozizaene
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Dr. Patrick Rabe Tim A. Klapschinski Prof. Dr. Jeroen S. Dickschat 《Chembiochem : a European journal of chemical biology》2016,17(14):1333-1337
The EI‐MS fragmentation mechanism of the bacterial sesquiterpene epi‐isozizaene was investigated through enzymatic conversion of all 15 synthetic (13C1)FPP isotopomers with the epi‐isozizaene synthase from Streptomyces albus and GC‐MS and GC‐QTOF analysis including MS‐MS. A systematic method, which we wish to call position‐specific mass shift analysis, for the identification of the full set of fragmentation reactions was developed. 相似文献
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Lena Barra Prof. Dr. Jeroen S. Dickschat 《Chembiochem : a European journal of chemical biology》2017,18(23):2358-2365
Analysis of the volatile terpenes produced by seven fungal strains of the genus Trichoderma by use of a closed‐loop stripping apparatus (CLSA) revealed a common production of harzianone, a bioactive, structurally unique diterpenoid consisting of a fused tetracyclic 4,7,5,6‐membered ring system. The terpene cyclization mechanism was studied by feeding experiments using selectively 13C‐ and 2H‐labeled synthetic mevalonolactone isotopologues, followed by analysis of the incorporation patterns by 13C NMR spectroscopy and GC/MS. The structure of harzianone was further supported from a 13C,13C COSY experiment of the in‐vivo‐generated fully 13C‐labeled diterpene. 相似文献
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Pan Fang Yanlong Ji Thomas Oellerich Henning Urlaub Kuan-Ting Pan 《International journal of molecular sciences》2022,23(3)
Protein glycosylation governs key physiological and pathological processes in human cells. Aberrant glycosylation is thus closely associated with disease progression. Mass spectrometry (MS)-based glycoproteomics has emerged as an indispensable tool for investigating glycosylation changes in biological samples with high sensitivity. Following rapid improvements in methodologies for reliable intact glycopeptide identification, site-specific quantification of glycopeptide macro- and micro-heterogeneity at the proteome scale has become an urgent need for exploring glycosylation regulations. Here, we summarize recent advances in N- and O-linked glycoproteomic quantification strategies and discuss their limitations. We further describe a strategy to propagate MS data for multilayered glycopeptide quantification, enabling a more comprehensive examination of global and site-specific glycosylation changes. Altogether, we show how quantitative glycoproteomics methods explore glycosylation regulation in human diseases and promote the discovery of biomarkers and therapeutic targets. 相似文献
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Nishant Pappireddi Dr. Lance Martin Prof. Martin Wühr 《Chembiochem : a European journal of chemical biology》2019,20(10):1210-1224
Over the last few decades, mass spectrometry-based proteomics has become an increasingly powerful tool that is now able to routinely detect and quantify thousands of proteins. A major advance for global protein quantification was the introduction of isobaric tags, which, in a single experiment, enabled the global quantification of proteins across multiple samples. Herein, these methods are referred to as multiplexed proteomics. The principles, advantages, and drawbacks of various multiplexed proteomics techniques are discussed and compared with alternative approaches. We also discuss how the emerging combination of multiplexing with targeted proteomics might enable the reliable and high-quality quantification of very low abundance proteins across multiple conditions. Lastly, we suggest that fusing multiplexed proteomics with data-independent acquisition approaches might enable the comparison of hundreds of different samples without missing values, while maintaining the superb measurement precision and accuracy obtainable with isobaric tag quantification. 相似文献