Stop-flow programmable selectivity with a dual-column ensemble of microfabricated etched silicon columns and air as carrier gas

A series-coupled ensemble of microfabricated GC columns made by dry reactive ion etching of silicon substrates is evaluated for use with pneumatic selectivity enhancement techniques for targeted pairs of volatile organic compounds. Each column is 3.0 m long with a 150 miceom wide by 240 microm deep cross section. Dynamic coating was used to prepare a nonpolar column with a dimethyl polysiloxane stationary phase and a moderately polar column with a trifluoropropylmethyl polysiloxane stationary phase. Each column generates 5000-6000 theoretical plates. The columns are operated in series with the nonpolar column connected to a split inlet, the polar column connected to a flame ionization detector, and a valve connected between the column junction point and the inlet to the first column. When the valve is closed, the effluent from the first column passes directly into the second column. When the valve is open, both ends of the first column are at the inlet pressure, and flow stops in this column while increased flow is obtained in the second column. For analyte pairs that are separated by the first column but coelute from the column ensemble, the valve is opened for a few seconds after the first component of the pair has passed into the second column but the second component is still in the first column. The result is enhanced separation of the pair in the ensemble chromatogram. Relatively thick cross-linked stationary-phase films are used to increase retention for volatile compounds. The combination of air carrier gas and stationary-phase film thickness in the range 1-2 microm requires the use of relatively low average carrier gas velocities (typically less than 10 cm/s) for adequate resolving power of the column ensemble. Selectivity enhancement under isothermal conditions for a 14-component mixture of volatile organic compounds is demonstrated where neither of the columns alone nor the column ensemble without selectivity enhancement could obtain a complete separation.     

3D-printing of a complete modular ion mobility spectrometer

Three-dimensional printing (3D-printing) is an asset for rapid prototyping. Therefore, this technology is applied in amateur, fundamental as well as in applied research communities. Moreover, the fused deposition modeling even allows a cheap and fast 3D-printing of functional filaments such as conductive or ferro-magnetic materials. Further applicable materials enable the production of electronic circuits, electrodes or even complete analytical sensors.Here, a 3D-printed stand-alone drift tube ion mobility spectrometer (IMS) completely manufactured in one process is presented. The ionization chamber, the Bradbury-Nielsen gate, the partly conductive drift tube, and the detector including an aperture grid and a Faraday plate were printed by dual extrusion 3D-printing. Therefore, non-conductive polylactic acid (PLA) was utilized for the housing and conductive PLA was used for the electrodes, the ion gate and the detector. Due to a magnetic quick lock system and a modular design, each part of this innovative ion mobility spectrometer can be exchanged in an instant. All parts were validated individually and as a whole by comparing them to an ion mobility spectrometer produced by computerized numerical control machining consisting of polytetrafluoroethylene (PTFE).To investigate the performance, parameters regarding the resolution, resolving power, signal-to-noise ratio, running-in period and long-term stability were used involving a set of isomeric volatile organic compounds (VOCs). Notably, every single 3D-printed component as well as the completely 3D-printed IMS could keep up with the traditionally produced ones. Furthermore, the signal intensity was comparable to the signal intensity of the PTFE-IMS in exemplary optimization steps. The resolution, resolving power and signal-to-noise ratio could be improved by the variation of the Bradbury-Nielsen gate design, thus demonstrating the potential of the 3D-printing for design optimization and rapid prototyping of analytical instrumentation.     

Frequency-scanning MALDI linear ion trap mass spectrometer for large biomolecular ion detection

This study presents the first report on the development of a matrix-assisted laser desorption ionization (MALDI) linear ion trap mass spectrometer for large biomolecular ion detection by frequency scan. We designed, installed, and tested this radio frequency (RF) scan linear ion trap mass spectrometer and its associated electronics to dramatically extend the mass region to be detected. The RF circuit can be adjusted from 300 to 10 kHz with a set of operation amplifiers. To trap the ions produced by MALDI, a high pressure of helium buffer gas was employed to quench extra kinetic energy of the heavy ions produced by MALDI. The successful detection of the singly charged secretory immunoglobulin A ions indicates that the detectable mass-to-charge ratio (m/z) of this system can reach ~385 000 or beyond.     

Chemiluminescence determination of chlorinated volatile organic compounds by conversion on nanometer TiO2

A novel method based on conversion of chlorinated volatile organic compounds (CVOCs) to chlorine using a new type of column packed with nanometer TiO2 coupled with chemiluminescence (CL) has been developed for determination of them in workplace air. CVOCs are converted to chlorine by nanometer TiO2 at 220 degrees C. The Cl2 that is produced is selectively enriched on the column and subsequently released from the column at 600 degrees C. The Cl2 that is released is determined using a postcolumn CL detector. The CL intensity was linear with CCl4 in the range of 0.1-380 ppm, and the detection limit was 40 ppb (S/N = 3). Higher sensitivity could be acquired by using a larger volume of enrichment A similar procedure could be used for the determination of other CVOCs. CL intensities of CH2Cl2, CHCl3, and CCl4 at the same concentration increased in the order CH2Cl2 < CHCl3 < CCl4. The method has been successfully applied to the determination of CCl4 in workplace air, where 0.15-150 ppm CCl4 would be detected. The possible mechanism for the long lifetime of the column packed with nanometer TiO2 was tested using Raman spectrometer, X-ray powder diffraction, transmission electron microscopy and X-ray photoelectron spectroscopy. The results showed that the column packed with nanometer TiO2 could be operated in the reversible mode for determination of CVOCs under the present conditions. The method would be potentially applied to the analysis of other chlorinated compounds in environment, such as persistent organic pollutants.     

Micromachined Bradbury-Nielsen gates

Bradbury-Nielsen gates (BNGs) are a standard way for gating or steering beams of charged particles in ion mobility spectrometry and time-of-flight mass spectrometry. They consist of a pair of interleaved electrodes that when at the same potential allow ions to pass through the electrodes undeflected and, when a voltage is applied, cause the ions to be deflected from their propagation axis. Previous efforts to construct such devices have relied on mechanical assembly by winding wires across an aperture. We describe a micromachining method for making monolithic BNGs using deep reactive ion etching of silicon-on-insulator wafers. This method enables the creation of electrodes with spacings ranging from 25 to 100 microm with a thickness of 20 microm, covering a 5 mm by 5 mm active area. We characterize the performance of these micromachined BNGs by ion imaging in a pseudorandom time-of-flight mass spectrometer.     

Development and characterization of microfabricated disposable gold working electrodes for high-performance ion chromatography and integrated pulsed amperometric detection

We have developed a new type of microfabricated thin-film electrode on polymeric substrates. The microfabrication process allows for inexpensive and reproducible mass production of disposable working electrodes for high-performance ion chromatography and integrated pulsed amperometric detection (IPAD). These microfabricated electrodes are disposable and have been optimized for use in flow-through low-dead-volume electrochemical cells. The analytical performance of microfabricated gold electrodes was characterized with the help of the IPAD method for amino acid detection under alkaline conditions required for anion-exchange separations. When used with a new optimized six-potential IPAD waveform, the electrodes functioned properly for weeks. Compared to nondisposable working electrodes, the disposable working electrodes generated equal or better results in the limit of detection, linearity of calibration, and reproducibility. Disposable electrodes make it possible to avoid polishing and reconditioning, which are required with nondisposable electrodes.     

Microfabricated differential mobility spectrometry with pyrolysis gas chromatography for chemical characterization of bacteria

A microfabricated drift tube for differential mobility spectrometry (DMS) was used with pyrolysis-gas chromatography (py-GC) to chemically characterize bacteria through three-dimensional plots of ion intensity, compensation voltage from differential mobility spectra, and chromatographic retention time. The DMS analyzer provided chemical information for positive and negative ions simultaneously from chemical reactions between pyrolysis products in the GC effluent and reactant ions of H+(H2O)n and O2-(H2O)n in air at ambient pressure. Authentic standards for chemicals formed in the pyrolysis of bacteria showed favorable matches with plots from py-GC/DMS analysis and were supported by py-GC/MS results. These and other yet-unidentified constituents provided a means to distinguish Escherichia coli from Micrococcus luteus. A Gram-positive spore former (Bacillus megaterium) was distinguished by an abundant peak for crotonic acid evident in positive and negative ions and not observed with M. luteus. In contrast, plots from py-GC/DMS of lipid A and lipoteichoic acid showed poor matches to plots for a Gram-negative (E. coli) bacterium and a Gram-positive (M. luteus) bacterium and the differences were attributed to differences in genus sources of the biopolymers. A significant percentage of the chemical information available in py-GC/DMS is unidentified, and the analytical utility must be established. Precision in the chemical measurement was determined as +/- 0.2 V, 10% relative standard deviation (RSD), and +/- 0.05 min for compensation voltage, peak intensity, and retention time, respectively. The minimum number of total bacteria (cell forming units) detected was 6000 though detection limits and resolution could be varied by the magnitude of the separation voltage in the differential mobility spectrometer.     

Durable microfabricated high-speed humidity sensors

We describe a durable microfabricated humidity sensor made of interdigitated rhodium electrodes on a silicon substrate covered with a sensing film of Nafion perfluorosulfonate ionomer. Rhodium electrodes are much less prone to oxidative degradation compared to previously described gold electrode-based sensors. Even with dc excitation, Rh electrode sensors exhibit excellent long-term response stability. It has been found that low-amplitude (+/-1 V) square wave excitation can prolong the usability of gold electrode-based sensors to at least several months; however, this mode of interrogation cannot provide subsecond response times. Rhodium deposition on the microsensors is much more difficult than that of gold. We were able to attain crack-free Rh deposits by adaptation of pulsed electroplating techniques. At excitation voltages of >2 V dc, the Rh sensors respond to moisture with 10 <--> 90% rise and fall times of 30-50 ms. These are the fastest microfabricated water vapor sensors reported to date. We demonstrate applications as a breath monitor. Such sensors should also be of utility in atmospheric eddy measurements. Short-term repeatability is better than 0.6% RSD (n = 7).     

A method for measuring vapor pressures of low-volatility organic aerosol compounds using a thermal desorption particle beam mass spectrometer

A temperature-programmed thermal desorption method for measuring vapor pressures of low-volatility organic aerosol compounds has been developed. The technique employs a thermal desorption particle beam mass spectrometer we have recently developed for real-time composition analysis of organic aerosols. Particles are size selected using a differential mobility analyzer, sampled into a high-vacuum chamber as an aerodynamically focused beam, collected by impaction on a cryogenically cooled surface, slowly vaporized by resistive heating, and analyzed in a quadrupole mass spectrometer. A simple evaporation model developed from the kinetic theory of gases is used to calculate compound vapor pressures over the temperature range of evaporation. The data are fit to a Clausius-Clapeyron equation to obtain a relationship between vapor pressure and temperature and to determine the heat of vaporization. The technique has been evaluated using C13-C18 monocarboxylic and C6-C8 dicarboxylic acids, which have vapor pressures at 25 degrees C of approximately 10(-4) - 10(-6) Pa, but less volatile compounds can also be analyzed. The method is relatively simple and rapid and yields vapor pressures and heats of vaporization that are in good agreement with literature values. The technique will be used to generate a new database of vapor pressures for low-volatility atmospheric organic compounds.     

Breath analysis and monitoring by membrane extraction with sorbent interface

An analytical system consisting of a sampling chamber, membrane extraction module, sorbent trap and gas chromatograph with flame ionization or ion mobility detector was used for on-line monitoring of the composition of the last 250 mL portion of human expired breath. The sampling chamber consisted of a tube fitted with check valves on both ends to allow the air to pass through during expiration, but not to return or allow mixing with ambient air. The last portion of breath was held in the chamber at the end of breath expiration. The organic components in the trapped breath were transferred to the carrier gas by permeation through the membrane in the extraction module and were concentrated in the sorbent trap before introduction as a sharp plug on the front of chromatographic column. Moisture in the breath did not penetrate the membrane to a substantial degree. This system was used to investigate presence of acetone as a biologically important marker of human health as well as exposure to volatile compounds.     

Controlled dielectrophoretic nanowire self-assembly using atomic layer deposition and suspended microfabricated electrodes

Effects of design and materials on the dielectrophoretic self-assembly of individual gallium nitride nanowires (GaN NWs) onto microfabricated electrodes have been experimentally investigated. The use of TiO(2) surface coating generated by atomic layer deposition (ALD) improves dielectrophoretic assembly yield of individual GaN nanowires on microfabricated structures by as much as 67%. With a titanium dioxide coating, individual nanowires were placed across suspended electrode pairs in 46% of tests (147 out of 320 total), versus 28% of tests (88 out of 320 total tests) that used uncoated GaN NWs. An additional result from these tests was that suspending the electrodes 2.75 μm above the substrate corresponded with up to 15.8% improvement in overall assembly yield over that of electrodes fabricated directly on the substrate.     

Gas chromatography connected to multiple channel electrospray ionization mass spectrometry for the detection of volatile organic compounds

This work successfully connected gas chromatography (GC) to seven-channel electrospray ionization (ESI) mass spectrometry to separate and detect a mixture of volatile organic compounds. Gaseous analyte was eluted separately from a GC column and directed into the central channel of the ESI source. The analyte was protonated by ion-molecule reactions between the analyte and the ions which were generated by electrospraying the acidic solution through the outside six channels surrounding the central channel. Real-time analysis of the organic reaction involving volatile and thermally unstable compounds (dimethylhydrazine ? azomethane + H(2)) was also achieved by continuously purging the air in the reaction vessel to the seven-channel ESI source.     

Theory and analysis of electrode size optimization for capacitive microfabricated ultrasonic transducers

Theoretical analysis and computer simulations of capacitive microfabricated ultrasonic transducers indicate that device performance can be optimized through judicious patterning of electrodes. The conceptual basis of the analysis is that electrostatic force should be applied only where it is most effective, such as at the center of a circular membrane. If breakdown mechanisms are ignored, an infinitesimally small electrode with an infinite bias voltage results in the optimal transducer. A more realistic design example compares the 3-dB bandwidths of a fully metalized transducer and a partially metalized transducer, each tuned with a lossless Butterworth network. It is found that the bandwidth of the optimally metalized device is twice that of the fully metalized device.     

Optimization of dielectrophoretic DNA stretching in microfabricated devices

We have found that the surface and bulk solution properties in a microfabricated device affect the degree and probability of electrostretching of DNA molecules. Using lambda phage DNA, we found that significantly hydrophilic surfaces between the electrodes decrease the efficiency of stretching. Surfaces treated with higher silane (trimethylchlorosilane) concentrations performed better presumably due to the decreased nonspecific adsorption of DNA on these surfaces compared to their more hydrophilic counterparts. The shape and dimensions of the electrodes also affected the efficiency of stretching. Both liftoff and metal etching methods produced electrodes with random microscopic peaks along the electrode's edge and were poorly suited for stretching. Annealing the electrodes (450 degrees C for 10 min) removed most of these peaks and allowed for more controlled stretching to be obtained. We also found that thin electrodes (65 nm) gave close to a 90% success rate of DNA stretching but stretching with thick electrodes (350 nm) produced only a 20% success rate.     

Cell separation on microfabricated electrodes using dielectrophoretic/gravitational field-flow fractionation

Dielectrophoretic/gravitational field-flow fractionation (DEP/G-FFF) was used to separate cultured human breast cancer MDA-435 cells from normal blood cells mixed together in a sucrose/dextrose medium. An array of microfabricated, interdigitated electrodes of 50 microns widths and spacings, and lining the bottom surface of a thin chamber (0.42 mm H x 25 mm W x 300 mm L), was used to generate DEP forces that levitated the cells. A 10-microL cell mixture sample containing approximately 50,000 cells was introduced into the chamber, and cancerous and normal blood cells were levitated to different heights according to the balance of DEP and gravitational forces. The cells at different heights were transported at different velocities under the influence of a parabolic flow profile that was established in the chamber and were thereby separated. Separation performance depended on the frequency and voltage of the applied DEP field and the fluid-flow rate. It took as little as 5 min to achieve cell separation. An analysis of the DEP/G-FFF results revealed that the separation exploited the difference in dielectric and density properties between cell populations. The DEP/G-FFF technique is potentially applicable to many biological and biomedical problems, especially those related to microfluidic systems.     

Species-specific bacteria identification using differential mobility spectrometry and bioinformatics pattern recognition

As bacteria grow and proliferate, they release a variety of volatile compounds that can be profiled and used for speciation, providing an approach amenable to disease diagnosis through quick analysis of clinical cultures as well as patient breath analysis. As a practical alternative to mass spectrometry detection and whole cell pyrolysis approaches, we have developed methodology that involves detection via a sensitive, micromachined differential mobility spectrometer (microDMx), for sampling headspace gases produced by bacteria growing in liquid culture. We have applied pattern discovery/recognition algorithms (ProteomeQuest) to analyze headspace gas spectra generated by microDMx to reliably discern multiple species of bacteria in vitro: Escherichia coli, Bacillus subtilis, Bacillus thuringiensis, and Mycobacterium smegmatis. The overall accuracy for identifying volatile profiles of a species within the 95% confidence interval for the two highest accuracy models evolved was between 70.4 and 89.3% based upon the coordinated expression of between 5 and 11 features. These encouraging in vitro results suggest that the microDMx technology, coupled with bioinformatics data analysis, has potential for diagnosis of bacterial infections.     

Comprehensive two-dimensional gas chromatographic separations with a microfabricated thermal modulator

Rapid, comprehensive two-dimensional gas chromatographic (GC × GC) separations by use of a microfabricated midpoint thermal modulator (μTM) are demonstrated, and the effects of various μTM design and operating parameters on performance are characterized. The two-stage μTM chip consists of two interconnected spiral etched-Si microchannels (4.2 and 2.8 cm long) with a cross section of 250 × 140 μm(2), an anodically bonded Pyrex cap, and a cross-linked wall coating of poly(dimethylsiloxane) (PDMS). Integrated heaters provide rapid, sequential heating of each μTM stage, while a proximate, underlying thermoelectric cooler provides continual cooling. The first-dimension column used for GC × GC separations was a 6 m long, 250 μm i.d. capillary with a PDMS stationary phase, and the second-dimension column was a 0.5 m long, 100 μm i.d. capillary with a poly(ethylene glycol) phase. Using sets of five to seven volatile test compounds (boiling point ≤174 °C), the effects of the minimum (T(min)) and maximum (T(max)) modulation temperature, stage heating lag/offset (O(s)), modulation period (P(M)), and volumetric flow rate (F) on the quality of the separations were evaluated with respect to several performance metrics. Best results were obtained with a T(min) = -20 °C, T(max) = 210 °C, O(s) = 600 ms, P(M) = 6 s, and F = 0.9 mL/min. Replicate modulated peak areas and retention times were reproducible to <5%. A structured nine-component GC × GC chromatogram was produced, and a 21 component separation was achieved in <3 min. The potential for creating portable μGC × μGC systems is discussed.     

Method for analysis of polar volatile trace components in aqueous samples by gas chromatography

A new method has been developed for direct analysis of volatile polar trace compounds in aqueous samples by gas chromatography. Water samples are injected onto a short packed precolumn containing anhydrous lithium chloride. A capillary column is coupled in series with the prefractionation column for final separation of the analytes. The enrichment principle of the salt precolumn is reverse to the principles employed in conventional methods such as SPE or SPME in which a sorbent or adsorbent is utilized to trap or concentrate the analytes. Such methods are not efficient for highly polar compounds. In the LiCl precolumn concept, the water matrix is strongly retained on the hygroscopic salt, whereas polar as well as nonpolar volatile organic compounds show very low retention and are eluted ahead of the water. After transfer of the analytes to the capillary column, the retained bulk water is removed by backflushing the precolumn at elevated temperature. For direct injections of 120 microL of aqueous samples, the combined time for injection and preseparation is only 3.5 min. With this procedure, direct repetitive automated analyses of highly volatile polar compounds such as methanol or tetrahydrofuran can be performed, and a limit of quantification in the low parts-per-billion region utilizing a flame ionization detector is demonstrated.     

Turn geometry for minimizing band broadening in microfabricated capillary electrophoresis channels

Turns in microfabricated capillary electrophoresis channels generally result in degraded separation quality. To circumvent this limitation, channels were constructed with different types of turns to determine the design that minimizes turn-induced band broadening. In particular, tapered turns were created by narrowing the separation channel width before the start of a turn and widening the channel after the turn is complete. The radius of curvature of the turn, the length over which the channel is tapered, and the degree of tapering were explored. The column efficiencies were determined by examining the resolution of the 271/281 base pair doublet in the separation of a phiX174 HaeIII DNA sizing ladder. Tapered turns with the smallest radius of curvature (250 microm), the shortest tapering length between the separation and turn widths (55 microm), and the largest tapering ratio (4:1 separation channel width to turn channel width) produced the highest resolution separations. These results are discussed by comparison to theoretical predictions of the effect of tapers and turns on analyte band dispersion in capillary electrophoresis.     

Effect of thermal desorption kinetics on vapor injection peak irregularities by a microscale gas chromatography preconcentrator

Microscale gas chromatography (μGC) is an emerging analytical technique for in situ analysis and on-site monitoring of volatile organic compounds (VOCs) in moderately complex mixtures. One of the critical subcomponents in a μGC system is a microfabricated preconcentrator (μ-preconcentrator), which enables detection of compounds existing in indoor/ambient air at low (～sub ppb) concentrations by enhancing their signals. The prevailing notion is that elution peak broadening and tailing phenomena resulting from undesirable conditions of a microfabricated separation column (μ-column) are the primary sources of poor chromatographic resolution. However, previous experimental results indicate that the resolution degradation still remains observed for a μ-column integrated with other μGC subcomponents even after setting optimal separation conditions. In this work, we obtain the evidence that the unoptimized μ-preconcentrator vapor release/injection performance significantly contributes to decrease the fidelity of μGC analysis using our state-of-the-art passive preconcentrator microdevice. The vapor release/injection performance is highly affected by the kinetics of the thermal desorption of compounds trapped in the microdevice. Decreasing the heating rate by 20% from the optimal rate of 90 °Cs(-1) causes a 340% increase in peak tailing as well as 70% peak broadening (30% peak height reduction) to the microscale vapor injection process.