PROSPECT-4 and 5: Advances in the leaf optical properties model separating photosynthetic pigments

The PROSPECT leaf optical model has, to date, combined the effects of photosynthetic pigments, but a finer discrimination among the key pigments is important for physiological and ecological applications of remote sensing. Here we present a new calibration and validation of PROSPECT that separates plant pigment contributions to the visible spectrum using several comprehensive datasets containing hundreds of leaves collected in a wide range of ecosystem types. These data include leaf biochemical (chlorophyll a, chlorophyll b, carotenoids, water, and dry matter) and optical properties (directional-hemispherical reflectance and transmittance measured from 400 nm to 2450 nm). We first provide distinct in vivo specific absorption coefficients for each biochemical constituent and determine an average refractive index of the leaf interior. Then we invert the model on independent datasets to check the prediction of the biochemical content of intact leaves. The main result of this study is that the new chlorophyll and carotenoid specific absorption coefficients agree well with available in vitro absorption spectra, and that the new refractive index displays interesting spectral features in the visible, in accordance with physical principles. Moreover, we improve the chlorophyll estimation (RMSE = 9 µg/cm²) and obtain very encouraging results with carotenoids (RMSE = 3 µg/cm²). Reconstruction of reflectance and transmittance in the 400-2450 nm wavelength domain using PROSPECT is also excellent, with small errors and low to negligible biases. Improvements are particularly noticeable for leaves with low pigment content.     

Leaf chlorophyll content retrieval from airborne hyperspectral remote sensing imagery

Hyperspectral remote sensing has great potential for accurate retrieval of forest biochemical parameters. In this paper, a hyperspectral remote sensing algorithm is developed to retrieve total leaf chlorophyll content for both open spruce and closed forests, and tested for open forest canopies. Ten black spruce (Picea mariana (Mill.)) stands near Sudbury, Ontario, Canada, were selected as study sites, where extensive field and laboratory measurements were carried out to collect forest structural parameters, needle and forest background optical properties, and needle biophysical parameters and biochemical contents chlorophyll a and b. Airborne hyperspectral remote sensing imagery was acquired, within one week of ground measurements, by the Compact Airborne Spectrographic Imager (CASI) in a hyperspectral mode, with 72 bands and half bandwidth 4.25-4.36 nm in the visible and near-infrared region and a 2 m spatial resolution. The geometrical-optical model 4-Scale and the modified leaf optical model PROSPECT were combined to estimate leaf chlorophyll content from the CASI imagery. Forest canopy reflectance was first estimated with the measured leaf reflectance and transmittance spectra, forest background reflectance, CASI acquisition parameters, and a set of stand parameters as inputs to 4-Scale. The estimated canopy reflectance agrees well with the CASI measured reflectance in the chlorophyll absorption sensitive regions, with discrepancies of 0.06%-1.07% and 0.36%-1.63%, respectively, in the average reflectances of the red and red-edge region. A look-up-table approach was developed to provide the probabilities of viewing the sunlit foliage and background, and to determine a spectral multiple scattering factor as functions of leaf area index, view zenith angle, and solar zenith angle. With the look-up tables, the 4-Scale model was inverted to estimate leaf reflectance spectra from hyperspectral remote sensing imagery. Good agreements were obtained between the inverted and measured leaf reflectance spectra across the visible and near-infrared region, with R² = 0.89 to R² = 0.97 and discrepancies of 0.02%-3.63% and 0.24%-7.88% in the average red and red-edge reflectances, respectively. Leaf chlorophyll content was estimated from the retrieved leaf reflectance spectra using the modified PROSPECT inversion model, with R² = 0.47, RMSE = 4.34 μg/cm², and jackknifed RMSE of 5.69 μg/cm² for needle chlorophyll content ranging from 24.9 μg/cm² to 37.6 μg/cm². The estimates were also assessed at leaf and canopy scales using chlorophyll spectral indices TCARI/OSAVI and MTCI. An empirical relationship of simple ratio derived from the CASI imagery to the ground-measured leaf area index was developed (R² = 0.88) to map leaf area index. Canopy chlorophyll content per unit ground surface area was then estimated, based on the spatial distributions of leaf chlorophyll content per unit leaf area and the leaf area index.     

Multiple shadow fractions in spectral mixture analysis of a cotton canopy

Shadows are being used more frequently to estimate plant canopy biophysical characteristics. Typically, a zero value is assumed or a threshold value is derived from histogram analysis of imagery to determine the shadow endmember (EM). Here, two distinct shadow EMs were measured in situ for use in spectral mixture analysis of a cotton canopy on five dates in 2003. The four EMs used in the analysis were: sunlit green leaf, sunlit dry soil, self-shadowed leaf, shadowed dry soil. This 4-EM model was compared to a 3-EM model where a zero-value shade EM was used for unmixing with the two sunlit EMs. Multiple endmember spectral mixture analysis (MESMA) was used to allow EM composition to vary across each scene. The analysis and EMs were applied to fine-scale hyperspectral image data collected in the wavelength range, 440 to 810 nm. Ground data collected included percent cover, height, SPAD (a measure of leaf greenness), and chlorophyll a concentration. The normalized difference vegetation index (NDVI) was also compared to the unmixing results. Regression analysis showed that NDVI was equal to the 4-EM model for estimation of percent cover (r² = 0.95, RMSE = 6.6) although the NDVI y-intercept was closer to zero. The 4-EM model was best for estimating height (r² = 0.79, RMSE = 0.07 m) and chlorophyll a concentration (r² = 0.46, RMSE = 7.0 μg/cm²). The 3-EM model and NDVI performed poorly when estimating chlorophyll a concentration. Inclusion of two distinct shadow EMs in the model improved relationships to crop biophysical parameters and was better than assuming one, zero-value shade EM. Since MESMA operates at the pixel level and allows variable EM assignment to each pixel, mapping the spatial variability of shadows and other variables of interest is possible, providing a powerful input to canopy and ecosystem models as well as precision farming.     

Utility of an image-based canopy reflectance modeling tool for remote estimation of LAI and leaf chlorophyll content at the field scale

This paper presents a physically-based approach for estimating critical variables describing land surface vegetation canopies, relying on remotely sensed data that can be acquired from operational satellite sensors. The REGularized canopy reFLECtance (REGFLEC) modeling tool couples leaf optics (PROSPECT), canopy reflectance (ACRM), and atmospheric radiative transfer (6SV1) model components, facilitating the direct use of at-sensor radiances in green, red and near-infrared wavelengths for the inverse retrieval of leaf chlorophyll content (C_ab) and total one-sided leaf area per unit ground area (LAI). The inversion of the canopy reflectance model is constrained by assuming limited variability of leaf structure, vegetation clumping, and leaf inclination angle within a given crop field and by exploiting the added radiometric information content of pixels belonging to the same field. A look-up-table with a suite of pre-computed spectral reflectance relationships, each a function of canopy characteristics, soil background effects and external conditions, is accessed for fast pixel-wise biophysical parameter retrievals. Using 1 m resolution aircraft and 10 m resolution SPOT-5 imagery, REGFLEC effectuated robust biophysical parameter retrievals for a corn field characterized by a wide range in leaf chlorophyll levels and intermixed green and senescent leaf material. Validation against in-situ observations yielded relative root-mean-square deviations (RMSD) on the order of 10% for the 1 m resolution LAI (RMSD = 0.25) and C_ab (RMSD = 4.4 μg cm^− 2) estimates, due in part to an efficient correction for background influences. LAI and C_ab retrieval accuracies at the SPOT 10 m resolution were characterized by relative RMSDs of 13% (0.3) and 17% (7.1 μg cm^− 2), respectively, and the overall intra-field pattern in LAI and C_ab was well established at this resolution. The developed method has utility in agricultural fields characterized by widely varying distributions of model variables and holds promise as a valuable operational tool for precision crop management. Work is currently in progress to extend REGFLEC to regional scales.     

Neural network estimation of LAI, fAPAR, fCover and LAI×Cab, from top of canopy MERIS reflectance data: Principles and validation

A neural network is developed to operationally estimate biophysical variables over land surfaces from the observations of the ENVISAT-MERIS instrument: the leaf area index (LAI), the fraction of absorbed photosynthetically active radiation (fAPAR), the fraction of vegetation cover (fCover), and the canopy chlorophyll content (LAI×C_ab). The neural network requires as input the geometry of observation and the top of canopy reflectances, corrected from the atmospheric effects, in eleven spectral bands. It is trained on a reflectance database made of radiative transfer model simulations. The principles underlying the generation of the database and the design of the network are first presented. The estimated variables are then compared to other existing products, LAI- and fAPAR-MODIS and MGVI-MERIS, and validated against ground measurements performed in the framework of the VALERI project. Results show remarkable consistency of the temporal dynamics between the several products with however some differences in the range of variation. When compared to actual VALERI ground measurements, the proposed algorithm shows the best performances for LAI (RMSE = 0.47) and fAPAR (RMSE = 0.09).     

Estimating chlorophyll concentration in conifer needles with hyperspectral data: An assessment at the needle and canopy level

This investigation quantitatively links chlorophyll a + b (chl _a + b) concentration, a physiological marker of forest health condition, to hyperspectral observations of Jack Pine (Pinus banksiana), a dominant Boreal forest species. Compact Airborne Spectrographic Imager (CASI) observations, in the visible-near infrared domain, were acquired over eight selected Jack Pine sites, near Sudbury, Ontario, between June and September of 2001. Supplementing the airborne campaigns was concurrent on-site collection of foliage samples for laboratory spectral and chemical measurements. The study first connected needle-level optical properties with pigment concentration through the inversion of radiative transfer models, LIBERTY and PROSPECT. Next, a chlorophyll sensitive optical index (R750/R710), was “scaled-up” using SAILH, a turbid medium canopy model, to estimate total pigment content at the canopy-level. Due to the potential confounding effects of open canopy structure and foliage clumping, the analysis accordingly focused on high spatial resolution CASI imagery (1 m) to visually target tree crowns, while accounting for shadowed areas. Chl _a + b concentration estimation from airborne spectral data using coupled leaf and canopy models was shown to be feasible with a root mean square error of 5.3 μg/cm², for a pigment range of 25.7 to 45.9 μg/cm². Such predictive algorithms using airborne-level data provide the methodology to be potentially scaled-up to satellite-level hyperspectral platforms for large scale monitoring of vegetation productivity and forest stand condition.     

Needle chlorophyll content estimation through model inversion using hyperspectral data from boreal conifer forest canopies

Leaf chlorophyll content in coniferous forest canopies, a measure of stand condition, is the target of studies and models linking leaf reflectance and transmittance and canopy hyperspectral reflectance imagery. The viability of estimation of needle chlorophyll content from airborne hyperspectral optical data through inversion of linked leaf level and canopy level radiative transfer models is discussed in this paper. This study is focused on five sites of Jack Pine (Pinus banksiana Lamb.) in the Algoma Region (Canada), where field, laboratory and airborne data were collected in 1998 and 1999 campaigns. Airborne hyperspectral CASI data of 72 bands in the visible and near-infrared region and 2 m spatial resolution were collected from 20×20 m study sites of Jack Pine in 2 consecutive years. It was found that needle chlorophyll content could be estimated at the leaf level (r²=0.4) by inversion of the PROSPECT leaf model from needle reflectance and transmittance spectra collected with a special needle carrier apparatus coupled to the Li-Cor 1800 integrating sphere. The Jack Pine forest stands used for this study with LAI>2, and the high spatial resolution hyperspectral reflectance collected, allowed the use of the SPRINT canopy reflectance model coupled to PROSPECT for needle chlorophyll content estimation by model inversion. The optical index R750/R710 was used as the merit function in the numerical inversion to minimize the effect of shadows and LAI variation in the mean canopy reflectance from the 20×20 m plots. Estimates of needle pigment content from airborne hyperspectral reflectance using this linked leaf-canopy model inversion methodology showed an r²=0.4 and RMSE=8.1 μg/cm² when targeting sunlit crown pixels in Jack Pine sites with pigment content ranging between 26.8 and 56.8 μg/cm² (1570-3320 μg/g).     

Hyperspectral remote sensing of cyanobacterial pigments as indicators for cell populations and toxins in eutrophic lakes

The growth of mass populations of toxin-producing cyanobacteria is a serious concern for the ecological status of inland waterbodies and for human and animal health. In this study we examined the performance of four semi-analytical algorithms for the retrieval of chlorophyll a (Chl a) and phycocyanin (C-PC) from data acquired by the Compact Airborne Spectrographic Imager-2 (CASI-2) and the Airborne Imaging Spectrometer for Applications (AISA) Eagle sensor. The retrieval accuracies of the semi-analytical models were compared to those returned by optimally calibrated empirical band-ratio algorithms. The best-performing algorithm for the retrieval of Chl a was an empirical band-ratio model based on a quadratic function of the ratio of reflectance at 710 and 670 nm (R² = 0.832; RMSE = 29.8%). However, this model only provided a marginally better retrieval than the best semi-analytical algorithm. The best-performing model for the retrieval of C-PC was a semi-analytical nested band-ratio model (R² = 0.984; RMSE = 3.98 mg m⁻³). The concentrations of C-PC retrieved using the semi-analytical model were correlated with cyanobacterial cell numbers (R² = 0.380) and the particulate and total (particulate plus dissolved) pools of microcystins (R² = 0.858 and 0.896 respectively). Importantly, both the empirical and semi-analytical algorithms were able to retrieve the concentration of C-PC at cyanobacterial cell concentrations below current warning thresholds for cyanobacteria in waterbodies. This demonstrates the potential of remote sensing to contribute to early-warning detection and monitoring of cyanobacterial blooms for human health protection at regional and global scales.     

Regional evaporation estimates from flux tower and MODIS satellite data

Two models were evaluated for their ability to estimate land surface evaporation at 16-day intervals using MODIS remote sensing data and surface meteorology as inputs. The first was the aerodynamic resistance-surface energy balance model, and the second was the Penman-Monteith (P-M) equation, where the required surface conductance is estimated from remotely-sensed leaf area index. The models were tested using 3 years of evaporation and meteorological measurements from two contrasting Australian ecosystems, a cool temperate, evergreen Eucalyptus forest and a wet/dry, tropical savanna. The aerodynamic resistance-surface energy balance approach failed because small errors in the radiative surface temperature translate into large errors in sensible heat, and hence into estimates of evaporation. The P-M model adequately estimated the magnitude and seasonal variation in evaporation in both ecosystems (RMSE = 27 W m^− 2, R² = 0.74), demonstrating the validity of the proposed surface conductance algorithm. This, and the ability to constrain evaporation estimates via the energy balance, demonstrates the superiority of the P-M equation over the surface temperature-based model. There was no degradation in the performance of the P-M model when gridded meteorological data at coarser spatial (0.05°) and temporal (daily) resolution were substituted for locally-measured inputs.The P-M approach was used to generate a monthly evaporation climatology for Australia from 2001 to 2004 to demonstrate the potential of this approach for monitoring land surface evaporation and constructing monthly water budgets from 1-km to continental spatial scales.     

Disentangling the relationships between plant pigments and the photochemical reflectance index reveals a new approach for remote estimation of carotenoid content

The Photochemical Reflectance Index (PRI) is used as an indicator of leaf and plant canopy photosynthetic efficiency. However, the photosynthetic efficiency-PRI relationship has been shown to be inconsistent over time, likely due to changes in foliar pigment content.We measured reflectance spectra and biochemical properties from 24 leaves of two deciduous tree species and acquired pigment and reflectance data from the Leaf Optical Properties EXperiment database for an additional nine species. These data were used as inputs for the PROSPECT-5 leaf optical model. We found measurements of PRI to be significantly (p < 0.05) correlated with chlorophyll content, carotenoid content, and the carotenoid/chlorophyll ratio. However, only the PRI-carotenoid/chlorophyll ratio relationship was consistent across all analyses. Two predictive equations were derived from PROSPECT-5 simulations: a curvilinear PRI model (PRI(clm)) predicted the carotenoid/chlorophyll ratio (r² = 0.99), and a linear model using the chlorophyll index (CI(lm)) predicted chlorophyll content (r² = 0.98). Multiplying PRI(clm) with CI(lm) canceled the influence of chlorophyll content on PRI(clm) and thus allowed for prediction of carotenoid content from 11 deciduous tree species (r² = 0.83). Our results confirm that the PRI is significantly influenced by chlorophyll and carotenoid pools and demonstrate a new approach for non-destructive estimation of leaf carotenoid content using the PRI. Because variation in foliar physiological status is known to relate to leaf carotenoid content and the carotenoid/chlorophyll ratio, convolving the PRI with a chlorophyll index is likely to be useful for understanding the photosynthetic performance of deciduous vegetation across a wide range of temporal periods, ranging from daily to seasonal time scales.     

A LiDAR-derived canopy density model for tree stem and crown mapping in Australian forests

The retrieval of tree and forest structural attributes from Light Detection and Ranging (LiDAR) data has focused largely on utilising canopy height models, but these have proved only partially useful for mapping and attributing stems in complex, multi-layered forests. As a complementary approach, this paper presents a new index, termed the Height-Scaled Crown Openness Index (HSCOI), which provides a quantitative measure of the relative penetration of LiDAR pulses into the canopy. The HSCOI was developed from small footprint discrete return LiDAR data acquired over mixed species woodlands and open forests near Injune, Queensland, Australia, and allowed individual trees to be located (including those in the sub-canopy) and attributed with height using relationships (r² = 0.81, RMSE = 1.85 m, n = 115; 4 outliers removed) established with field data. A threshold contour of the HSCOI surface that encompassed ∼ 90% of LiDAR vegetation returns also facilitated mapping of forest areas, delineation of tree crowns and clusters, and estimation of canopy cover. At a stand level, tree density compared well with field measurements (r² = 0.82, RMSE = 133 stems ha^− 1, n = 30), with the most consistent results observed for stem densities ≤ 700 stems ha^− 1. By combining information extracted from both the HSCOI and the canopy height model, predominant stem height (r² = 0.91, RMSE = 0.77 m, n = 30), crown cover (r² = 0.78, RMSE = 9.25%, n = 30), and Foliage & Branch Projective Cover (FBPC; r² = 0.89, RMSE = 5.49%, n = 30) were estimated to levels sufficient for inventory of woodland and open forest structural types. When the approach was applied to forests in north east Victoria, stem density and crown cover were reliably estimated for forests with a structure similar to those observed in Queensland, but less so for forests of greater height and canopy closure.     

Leaf area index estimation with MODIS reflectance time series and model inversion during full rotations of Eucalyptus plantations

The leaf area index (LAI) of fast-growing Eucalyptus plantations is highly dynamic both seasonally and inter-annually, and is spatially variable depending on pedo-climatic conditions. LAI is very important in determining the carbon and water balance of a stand, but is difficult to measure during a complete stand rotation and at large scales. Remote-sensing methods allowing the retrieval of LAI time series with accuracy and precision are therefore necessary. Here, we tested two methods for LAI estimation from MODIS 250m resolution red and near-infrared (NIR) reflectance time series. The first method involved the inversion of a coupled model of leaf reflectance and transmittance (PROSPECT4), soil reflectance (SOILSPECT) and canopy radiative transfer (4SAIL2). Model parameters other than the LAI were either fixed to measured constant values, or allowed to vary seasonally and/or with stand age according to trends observed in field measurements. The LAI was assumed to vary throughout the rotation following a series of alternately increasing and decreasing sigmoid curves. The parameters of each sigmoid curve that allowed the best fit of simulated canopy reflectance to MODIS red and NIR reflectance data were obtained by minimization techniques. The second method was based on a linear relationship between the LAI and values of the GEneralized Soil Adjusted Vegetation Index (GESAVI), which was calibrated using destructive LAI measurements made at two seasons, on Eucalyptus stands of different ages and productivity levels. The ability of each approach to reproduce field-measured LAI values was assessed, and uncertainty on results and parameter sensitivities were examined. Both methods offered a good fit between measured and estimated LAI (R² = 0.80 and R² = 0.62 for model inversion and GESAVI-based methods, respectively), but the GESAVI-based method overestimated the LAI at young ages.     

Modeling directional-hemispherical reflectance and transmittance of fresh and dry leaves from 0.4 μm to 5.7 μm with the PROSPECT-VISIR model

Vegetation water content retrieval using passive remote sensing techniques in the 0.4-2.5 μm region (reflection of solar radiation) and the 8-14 μm region (emission of thermal radiation) has given rise to an abundant literature. The wavelength range in between, where the main water absorption bands are located, has surprisingly received very little attention because of the complexity of the radiometric signal that mixes both reflected and emitted fluxes. Nevertheless, it is now covered by the latest generation of passive optical sensors (e.g. SEBASS, AHS). This work aims at modeling leaf spectral reflectance and transmittance in the infrared, particularly between 3 μm and 5 μm, to improve the retrieval of vegetation water content using hyperspectral data. Two unique datasets containing 32 leaf samples each were acquired in 2008 at the USGS National Center, Reston (VA, USA) and the ONERA Research Center, Toulouse (France). Reflectance and transmittance were recorded using laboratory spectrometers in the spectral region from 0.4 μm to 14 μm, and the leaf water and dry matter contents were determined. It turns out that these spectra are strongly linked to water content up to 5.7 μm. This dependence is much weaker further into the infrared, where spectral features seem to be mainly associated with the biochemical composition of the leaf surface. The measurements show that leaves transmit light in this wavelength domain and that the transmittance of dry samples can reach 0.35 of incoming light around 5 μm, and 0.05 around 11 μm. This work extends the PROSPECT leaf optical properties model by taking into account the high absorption levels of leaf constituents (by the insertion of the complex Fresnel coefficients) and surface phenomena (by the addition of a top layer). The new model, PROSPECT-VISIR (VISible to InfraRed), simulates leaf reflectance and transmittance between 0.4 μm and 5.7 μm (at 1 nm spectral resolution) with a root mean square error (RMSE) of 0.017 and 0.018, respectively. Model inversion also allows the prediction of water (RMSE = 0.0011 g/cm²) and dry matter (RMSE = 0.0013 g/cm²) contents.     

Possibility investigation of tree diversity mapping using Landsat ETM+ data in the Hyrcanian forests of Iran

Lack of data often limits understanding and management of biodiversity in forested areas. Remote sensing imagery has considerable potential to aid in the monitoring and prediction of biodiversity across many spatial and temporal scales. In this paper, we explored the possibility of defining relationships between species diversity indices and Landsat ETM+ reflectance values for Hyrcanian forests in Golestan province of Iran. We used the COST model for atmospheric correction of the imagery. Linear regression models were implemented to predict measures of biodiversity (species richness and reciprocal of Simpson indices) using various combinations of Landsat spectral data. Species richness was modeled using the band set ETM5, ETM7, DVI, wetness and variances of ETM1, ETM2 and ETM5 (adjusted R² = 0.59, RMSE = 1.51). Reciprocal of Simpson index was modeled using the band set NDVI, brightness, greenness, variances of ETM2, ETM5 and ETM7 (adjusted R² = 0.459 RMSE = 1.15). The results demonstrated that spectral reflectance from Landsat can be used to effectively model tree species diversity. Predictive map derived from the presented methodology can help evaluate spatial aspects and monitor tree species diversity of the studied forest. The methodology also facilitates the evaluation of forest management and conservation strategies in northern Iran.     

Estimation of diurnal air temperature using MSG SEVIRI data in West Africa

Spatially distributed air temperature data with high temporal resolution are desired for several modeling applications. By exploiting the thermal split window channels in combination with the red and near infrared channels of the geostationary MSG SEVIRI sensor, multiple daily air temperature estimates can be achieved using the contextual temperature-vegetation index method. Air temperature was estimated for 436 image acquisitions during the 2005 rainy season over West Africa and evaluated against in situ data from a field test site in Dahra, Northern Senegal. The methodology was adjusted using data from the test site resulting in RMSE = 2.55 K, MBE = − 0.30 K and R² = 0.63 for the estimated versus observed air temperatures. A spatial validation of the method using 12 synoptic weather stations from Senegal and Mali within the Senegal River basin resulted in overall values of RMSE = 2.96 K, MBE = − 1.11 K and R² = 0.68. The daytime temperature curve is interpolated using a sine function based on the multiple daily air temperature estimates from the SEVIRI data. These estimates (covering the 8:00-20:00 UCT time window) were in good agreement with observed values with RMSE = 2.99 K, MBE = − 0.70 K and R² = 0.64. The temperature-vegetation index method was applied as a moving window technique to produce distributed maps of air temperature with 15 min intervals and 3 km spatial resolution for application in a distributed hydrological model.     

Improved forest biomass estimates using ALOS AVNIR-2 texture indices

Optical remote sensing is still one of the most attractive choices for obtaining biomass information, as new sensors are available with fine spatial and spectral resolutions. Better biomass estimates may be possible if suitable processing techniques for these sensors can be demonstrated. This research investigates the potential of high resolution optical data from the ALOS AVNIR-2 sensor for biomass estimation in a mountainous, subtropical forested region using four different types of image processing techniques including i) spectral reflectance and simple spectral band ratio, ii) commonly used vegetation indices, iii) texture parameters and iv) ratio of texture parameters. Simple linear and stepwise multiple regression models were developed between biomass data from 50 field plots, and image parameters derived from these techniques.Results indicate that spectral reflectance, the simple band ratio, and commonly used vegetation indices have relatively low potential for biomass estimation, as only about 58% of the variability in the field data was explained by the model (adjusted r² = 0.58 and RMSE = 64 t/ha). However, the texture parameters of spectral bands were found to be effective for biomass estimation with an explained variability of ca. 76% (adjusted r² = 0.76 and RMSE = 46 t/ha). The result was further improved to adjusted r² = 0.88 (RMSE = 32 t/ha) using the simple ratio of texture parameters. The results suggest that the performance of biomass estimation can be improved significantly using the texture parameters of high resolution optical data, and further improvement can be obtained using the ratio of texture parameters, as this combines the advantages of both texture and ratio.     

Inversion of a forest reflectance model to estimate structural canopy variables from hyperspectral remote sensing data

The potential of canopy reflectance modelling to retrieve simultaneously several structural variables in managed Norway spruce stands was investigated using the “Invertible Forest Reflectance Model”, INFORM. INFORM is an innovative extension of the FLIM model, with crown transparency, infinite crown reflectance and understory reflectance simulated using physically based sub-models (SAILH, LIBERTY and PROSPECT). The INFORM model was inverted with hyperspectral airborne HyMap data using a neural network approach. INFORM based estimates of forest structural variables were produced using site-specific ranges of stand structural variables. A relatively simple three layer feed-forward backpropagation neural network with two input neurons, one neuron in the hidden layer and three output neurons was employed to map leaf area index (LAI), crown coverage and stem density.To identify the optimum 2-band spectral subset to be used in the inversion process, all 2-band combinations of the HyMap dataset were systematically evaluated for model inversion. Field measurements of structural variables from 39 forest stands were used to validate the maps produced from HyMap imagery. Using two HyMap wavebands at 837 nm and 1148 nm the obtained accuracy of the LAI map amounts to an rmse of 0.58 (relative rmse = 18% of mean, R² = 0.73). With HyMap data resampled to Landsat TM spectral bands and using two “optimum” bands at 840 nm and 1650 nm, rmse was 0.66 and relative rmse 21%. In contrast to approaches based on empirical relations between spectral vegetation indices and structural variables, the main advantage of the inversion approach is that it does not require previous calibration.     

Remote sensing of woody shrub cover in desert grasslands using MISR with a geometric-optical canopy reflectance model

A new method is described for the retrieval of fractional cover of large woody plants (shrubs) at the landscape scale using moderate resolution multi-angle remote sensing data from the Multiangle Imaging SpectroRadiometer (MISR) and a hybrid geometric-optical (GO) canopy reflectance model. Remote sensing from space is the only feasible method for regularly mapping woody shrub cover over large areas, an important application because extensive woody shrub encroachment into former grasslands has been seen in arid and semi-arid grasslands around the world during the last 150 years. The major difficulty in applying GO models in desert grasslands is the spatially dynamic nature of the combined soil and understory background reflectance: the background is important and cannot be modeled as either a Lambertian scatterer or by using a fixed bidirectional reflectance distribution function (BRDF). Candidate predictors of the background BRDF at the Sun-target-MISR angular sampling configurations included the volume scattering kernel weight from a Li-Ross BRDF model; diffuse brightness (ρ0) from the Modified Rahman-Pinty-Verstraete (MRPV) BRDF model; other Li-Ross kernel weights (isotropic, geometric); and MISR near-nadir bidirectional reflectance factors (BRFs) in the blue, green, and near infra-red bands. The best method was multiple regression on the weights of a kernel-driven model and MISR nadir camera blue, green, and near infra-red bidirectional reflectance factors. The results of forward modeling BRFs for a 5.25 km² area in the USDA, ARS Jornada Experimental Range using the Simple Geometric Model (SGM) with this background showed good agreement with the MISR data in both shape and magnitude, with only minor spatial discrepancies. The simulations were shown to be accurate in terms of both absolute value and reflectance anisotropy over all 9 MISR views and for a wide range of canopy configurations (r² = 0.78, RMSE = 0.013, N = 3969). Inversion of the SGM allowed estimation of fractional shrub cover with a root mean square error (RMSE) of 0.03 but a relatively weak correlation (r² = 0.19) with the reference data (shrub cover estimated from high resolution IKONOS panchromatic imagery). The map of retrieved fractional shrub cover was an approximate spatial match to the reference map. Deviations reflect the first-order approximation of the understory BRDF in the MISR viewing plane; errors in the shrub statistics; and the 12 month lag between the two data sets.     

Satellite-based and mesoscale regression modeling of monthly air and soil temperatures over complex terrain in Turkey

Simple regression algorithms were developed to quantify spatio-temporal dynamics of minimum and maximum air temperatures (T_min and T_max, respectively) and soil temperature for a depth of 0-5 cm (T_soil-5cm) across complex terrain in Turkey using Moderate Resolution Imaging Spectroradiometer (MODIS) data at a 500-m resolution. A total of 762 16-day MODIS composites (127 images × 6 bands) between 2000 and 2005 were averaged over a monthly basis to temporally match monthly T_min, T_max, and T_soil-5cm from 83 meteorological stations. A total of 60 (28 temporally averaged plus 32 time series-based) linear regression models of T_min, T_max, and T_soil-5cm were developed using best subsets procedure as a function of a combination of 12 explanatory variables: six MODIS bands of blue, red, near infrared (NIR), middle infrared (MIR), normalized difference vegetation index (NDVI), and enhanced vegetation index (EVI); four geographical variables of latitude, longitude, altitude, and distance to sea (DtS); and two temporal variables of month, and year. The best multiple linear regression models elucidated 65% (RMSE = 5.9 °C), 65% (RMSE = 5.1 °C), and 57% (RMSE = 6.9 °C) of variations in T_min, T_max, and T_soil-5cm, respectively, under a wide range of T_min (−34 to 25 °C), T_max (0.2-47 °C) and T_soil-5cm (−9 to 40 °C) observed at the 83 stations.