Assessment of QuickBird high spatial resolution imagery to detect red attack damage due to mountain pine beetle infestation

High spatial resolution remotely sensed data has the potential to complement existing forest health programs for both strategic planning over large areas, as well as for detailed and precise identification of tree crowns subject to stress and infestation. The area impacted by the current mountain pine beetle (Dendroctonus ponderosae Hopkins) outbreak in British Columbia, Canada, has increased 40-fold over the previous 5 years, with approximately 8.5 million ha of forest infested in 2005. As a result of the spatial extent and intensity of the outbreak, new technologies are being assessed to help detect, map, and monitor the damage caused by the beetle, and to inform mitigation of future beetle outbreaks. In this paper, we evaluate the capacity of high spatial resolution QuickBird multi-spectral imagery to detect mountain pine beetle red attack damage. ANOVA testing of individual spectral bands, as well as the Normalized Difference Vegetation Index (NDVI) and a ratio of red to green reflectance (Red-Green Index or RGI), indicated that the RGI was the most successful (p < 0.001) at separating non-attack crowns from red attack crowns. Based on this result, the RGI was subsequently used to develop a binary classification of red attack and non-attack pixels. The total number of QuickBird pixels classified as having red attack damage within a 50 m buffer of a known forest health survey point were compared to the number of red attack trees recorded at the time of the forest health survey. The relationship between the number of red attack pixels and observed red attack crowns was assessed using independent validation data and was found to be significant (r² = 0.48, p < 0.001, standard error = 2.8 crowns). A comparison of the number of QuickBird pixels classified as red attack, and a broader scale index of mountain pine beetle red attack damage (Enhanced Wetness Difference Index, calculated from a time series of Landsat imagery), was significant (r² = 0.61, p < 0.001, standard error = 1.3 crowns). These results suggest that high spatial resolution imagery, in particular QuickBird satellite imagery, has a valuable role to play in identifying tree crowns with red attack damage. This information could subsequently be used to augment existing detailed forest health surveys, calibrate synoptic estimates of red attack damage generated from overview surveys and/or coarse scale remotely sensed data, and facilitate the generation of value-added information products, such as estimates of timber volume impacts at the forest stand level.     

Integrating remotely sensed and ancillary data sources to characterize a mountain pine beetle infestation

The ongoing mountain pine beetle (Dendroctonus ponderosae Hopkins) outbreak in British Columbia, Canada, has reached epidemic proportions, with the beetle expanding into geographic areas outside its known biological range. In this study, estimates of red attack damage were derived from a logistic regression model using multi-date Landsat imagery, and ancillary information including terrain attributes and solar radiation. The model estimates were found to be approximately 70% accurate using an independent set of beetle survey data as validation. This probability surface of red attack damage, along with forest inventory and terrain attributes, were used as inputs to decision tree analyses, in order to identify which forest attributes were associated with stands that had a greater likelihood of mountain pine beetle red attack damage. Three distinct decision tree models were developed, with each having a different set of input variables. The results of the analyses indicated that site index (an indicator of the quality of a forest site) and slope were the principal discriminators of the current mountain pine beetle attack, followed by basal area of pine dominated stands, and to a lesser extent, crown closure and stem density. The results suggest that indicators of site quality, particularly site index, could be a complementary addition to existing stand susceptibility rating models.     

A Landsat time series approach to characterize bark beetle and defoliator impacts on tree mortality and surface fuels in conifer forests

Insects are important forest disturbance agents, and mapping their effects on tree mortality and surface fuels represents a critical research challenge. Although various remote sensing approaches have been developed to monitor insect impacts, most studies have focused on single insect agents or single locations and have not related observed changes to ground-based measurements. This study presents a remote sensing framework to (1) characterize spectral trajectories associated with insect activity of varying duration and severity and (2) relate those trajectories to ground-based measurements of tree mortality and surface fuels in the Cascade Range, Oregon, USA. We leverage a Landsat time series change detection algorithm (LandTrendr), annual forest health aerial detection surveys (ADS), and field measurements to investigate two study landscapes broadly applicable to conifer forests and dominant insect agents of western North America. We distributed 38 plots across multiple forest types (ranging from mesic mixed-conifer to xeric lodgepole pine) and insect agents (defoliator [western spruce budworm] and bark beetle [mountain pine beetle]). Insect effects were evident in the Landsat time series as combinations of both short- and long-duration changes in the Normalized Burn Ratio spectral index. Western spruce budworm trajectories appeared to show a consistent temporal evolution of long-duration spectral decline (loss of vegetation) followed by recovery, whereas mountain pine beetle plots exhibited both short- and long-duration spectral declines and variable recovery rates. Although temporally variable, insect-affected stands generally conformed to four spectral trajectories: short-duration decline then recovery, short- then long-duration decline, long-duration decline, long-duration decline then recovery. When comparing remote sensing data with field measurements of insect impacts, we found that spectral changes were related to cover-based estimates (tree basal area mortality [R²_adj = 0.40, F_1,34 = 24.76, P < 0.0001] and down coarse woody detritus [R²_adj = 0.29, F_1,32 = 14.72, P = 0.0006]). In contrast, ADS changes were related to count-based estimates (e.g., ADS mortality from mountain pine beetle positively correlated with ground-based counts [R²_adj = 0.37, F_1,22 = 14.71, P = 0.0009]). Fine woody detritus and forest floor depth were not well correlated with Landsat- or aerial survey-based change metrics. By characterizing several distinct temporal manifestations of insect activity in conifer forests, this study demonstrates the utility of insect mapping methods that capture a wide range of spectral trajectories. This study also confirms the key role that satellite imagery can play in understanding the interactions among insects, fuels, and wildfire.     

Assessing canopy mortality during a mountain pine beetle outbreak using GeoEye-1 high spatial resolution satellite data

Continuing, severe outbreaks of mountain pine beetle (Dendroctonus ponderosae) across western North America have resulted in widespread mortality of lodgepole pine (Pinus contorta). Multiple studies have used high spatial resolution satellite data to map areas of beetle kill; these studies have largely focused on mapping red canopy cover associated with recent tree mortality and have not examined mapping gray canopy cover that occurs after red needles have dropped. The work presented here examines the use of newly available GeoEye-1 data for mapping both red and gray canopy area in southeastern Wyoming lodgepole pine forest. A 0.5 m spatial resolution, pan-sharpened GeoEye-1 image was used to classify areas of green, red, and gray canopy cover. Reference data were collected at twelve 500 m² field plots. Shadow-normalized green, red, and gray canopy area from classified GeoEye-1 data closely agreed with field-estimated green, red, and gray canopy area. Mean absolute error in canopy cover for the twelve sample plots was 8.3% for the green class, 5.4% for the red class, and 7.2% for the gray class. When all twelve plots were aggregated, remotely sensed estimates of green, red, and gray cover were within 1.7% of the field-estimated cover. Our results demonstrate that high spatial resolution spaceborne multispectral data are a promising tool for mapping canopy mortality caused by mountain pine beetle outbreaks.     

Estimation of insect infestation dynamics using a temporal sequence of Landsat data

The current outbreak of mountain pine beetle (Dendroctonus ponderosae) in western Canada has been increasing over the past decade and is currently estimated to be impacting 9.2 million hectares, with varying levels of severity. Large area insect monitoring is typically undertaken using manual aerial overview sketch mapping, whereby an interpreter depicts areas of homogenous insect attack conditions onto 1:250,000 or 1:100,000 scale maps. These surveys provide valuable strategic data for management at the provincial scale. The coarse spatial and attribute resolution of these data however, make them inappropriate for fine-scale monitoring and operational planning. For instance, it is not possible to estimate the initial timing of attack and year of stand death. In this study, we utilise eight Landsat scenes collected over a 14 year period in north-central British Columbia, Canada, where the infestation has gradually developed both spatially and temporally. After pre-processing and normalising the eight scenes using a relative normalisation procedure, decision tree analysis was applied to classify spectral trajectories of the Normalised Difference Moisture Index (NDMI). From the classified temporal sequence of images, key parameters were extracted including the presence of beetle disturbance and timing of stand decline. The accuracy of discriminating beetle attack from healthy forest stands was assessed both spatially and temporally using three years of aerial survey data (1996, 2003, and 2004) with results indicating overall classification accuracies varying between 71 and 86%. As expected, the earliest and least severe attack year (1996), recorded the lowest overall accuracy. The relationship between the timing of stand attack (i.e. moderate to severe beetle infestation) and NDMI (initial year of detected disturbance) was also explored. The results suggest that there is potential for deriving regional estimates of the year of stand death using Landsat data and decision tree analysis however, a higher temporal frequency of images is required to quantify the timing of mountain pine beetle attack.     

Leaf area index estimation with MODIS reflectance time series and model inversion during full rotations of Eucalyptus plantations

The leaf area index (LAI) of fast-growing Eucalyptus plantations is highly dynamic both seasonally and inter-annually, and is spatially variable depending on pedo-climatic conditions. LAI is very important in determining the carbon and water balance of a stand, but is difficult to measure during a complete stand rotation and at large scales. Remote-sensing methods allowing the retrieval of LAI time series with accuracy and precision are therefore necessary. Here, we tested two methods for LAI estimation from MODIS 250m resolution red and near-infrared (NIR) reflectance time series. The first method involved the inversion of a coupled model of leaf reflectance and transmittance (PROSPECT4), soil reflectance (SOILSPECT) and canopy radiative transfer (4SAIL2). Model parameters other than the LAI were either fixed to measured constant values, or allowed to vary seasonally and/or with stand age according to trends observed in field measurements. The LAI was assumed to vary throughout the rotation following a series of alternately increasing and decreasing sigmoid curves. The parameters of each sigmoid curve that allowed the best fit of simulated canopy reflectance to MODIS red and NIR reflectance data were obtained by minimization techniques. The second method was based on a linear relationship between the LAI and values of the GEneralized Soil Adjusted Vegetation Index (GESAVI), which was calibrated using destructive LAI measurements made at two seasons, on Eucalyptus stands of different ages and productivity levels. The ability of each approach to reproduce field-measured LAI values was assessed, and uncertainty on results and parameter sensitivities were examined. Both methods offered a good fit between measured and estimated LAI (R² = 0.80 and R² = 0.62 for model inversion and GESAVI-based methods, respectively), but the GESAVI-based method overestimated the LAI at young ages.     

Spectral retrogression and insect damage in lodgepole pine successional forests

A conceptual model for the spectral-temporal development of a forest stand was developed and tested. The model hypothesizes that reflectance changes for a regenerating forest stand follow a defined path in spectral brightnessgreenness space. Landsat Thematic Mapper imagery and field data collected from the lodgepole pine forest of Yellowstone National Park, USA provided an empirical means by which the theoretical model was tested. Recently disturbed stands are spectrally bright and low in greenness. As a stand progresses to midsuccessional stages, brightness decreases, but greenness of the stand is highly variable. Sites affected by the mountain pine beetle regress back along the brightness-greenness vector as the overstory is progressively thinned by the beetle infestation.     

Impact of understory vegetation on forest canopy reflectance and remotely sensed LAI estimates

Forest leaf area index (LAI), is an important variable in carbon balance models. However, understory vegetation is a recognized problem that limits the accuracy of satellite-estimated forest LAI. A canopy reflectance model was used to investigate the impact of the understory vegetation on LAI estimated from reflectance values estimated from satellite sensor data. Reflectance spectra were produced by the model using detailed field data as input, i.e. forest LAI, tree structural parameters, and the composition, distribution and reflectance of the forest floor. Common deciduous and coniferous forest types in southern Sweden were investigated. A negative linear relationship (r² = 0.6) was observed between field estimated LAI and the degree of understory vegetation, and the results indicated better agreement when coniferous and deciduous stands were analysed separately. The simulated spectra verified that the impact of the understory on the reflected signal from the top of the canopy is important; the reflectance values varying by up to ± 18% in the red and up to ± 10% in the near infra-red region of the spectra due to the understory. In order to predict the variation in LAI due to the understory vegetation, model inversions were performed where the input spectra were changed between the minimum, average and maximum reflectance values obtained from the forward runs. The resulting variation in LAI was found to be 1.6 units on average. The LAI of the understory could be predicted indirectly from simple stand data on forest characteristics, i.e. from allometric estimates, as an initial step in the process of estimating LAI. It is suggested here that compensation for the effect of the understory would improve the accuracy in the estimates of canopy LAI considerably.     

Comparison and evaluation of Medium Resolution Imaging Spectrometer leaf area index products across a range of land use

Leaf area index (LAI) is a commonly required parameter when modelling land surface fluxes. Satellite based imagers, such as the 300 m full resolution (FR) Medium Spectral Resolution Imaging Spectrometer (MERIS), offer the potential for timely LAI mapping. The availability of multiple MERIS LAI algorithms prompts the need for an evaluation of their performance, especially over a range of land use conditions. Four current methods for deriving LAI from MERIS FR data were compared to estimates from in-situ measurements over a 3 km × 3 km region near Ottawa, Canada. The LAI of deciduous dominant forest stands and corn, soybean and pasture fields was measured in-situ using digital hemispherical photography and processed using the CANEYE software. MERIS LAI estimates were derived using the MERIS Top of Atmosphere (TOA) algorithm, MERIS Top of Canopy (TOC) algorithm, the Canada Centre for Remote Sensing (CCRS) Empirical algorithm and the University of Toronto (UofT) GLOBCARBON algorithm. Results show that TOA and TOC LAI estimates were nearly identical (R² > 0.98) with underestimation of LAI when it is larger than 4 and overestimation when smaller than 2 over the study region. The UofT and CCRS LAI estimates had root mean square errors over 1.4 units with large (∼ 25%) relative residuals over forests and consistent underestimates over corn fields. Both algorithms were correlated (R² > 0.8) possibly due to their use of the same spectral bands derived vegetation index for retrieving LAI. LAI time series from TOA, TOC and CCRS algorithms showed smooth growth trajectories however similar errors were found when the values were compared with the in-situ LAI. In summary, none of the MERIS LAI algorithms currently meet performance requirements from the Global Climate Observing System.     

Detection of foliage conditions and disturbance from multi-angular high spectral resolution remote sensing

Disturbance of forest ecosystems, an important component of the terrestrial carbon cycle, has become a focus of research over recent years, as global warming is about to increase the frequency and severity of natural disturbance events. Remote sensing offers unique opportunities for detection of forest disturbance at multiple scales; however, spatially and temporally continuous mapping of non-stand replacing disturbance remains challenging. First, most high spatial resolution satellite sensors have relatively broad spectral ranges with bandwidths unsuitable for detection of subtle, stress induced, features in canopy reflectance. Second, directional and background reflectance effects, induced by the interactions between the sun-sensor geometry and the observed canopy surface, make up-scaling of empirically derived relationships between changes in spectral reflectance and vegetation conditions difficult. Using an automated tower based spectroradiometer, we analyse the interactions between canopy level reflectance and different stages of disturbance occurring in a mountain pine beetle infested lodgepole pine stand in northern interior British Columbia, Canada, during the 2007 growing season. Directional reflectance effects were modelled using a bidirectional reflectance distribution function (BRDF) acquired from high frequency multi-angular spectral observations. Key wavebands for observing changes in directionally corrected canopy spectra were identified using discriminant analysis and highly significant correlations between canopy reflectance and field measured disturbance levels were found for several broad and narrow waveband vegetation indices (for instance, r²_NDVI = 0.90; r²_CHL3 = 0.85; p < 0.05). Results indicate that multi-angular observations are useful for extraction of disturbance related changes in canopy reflectance, in particular the temporally and spectrally dense data detected changes in chlorophyll content well. This study will help guide and inform future efforts to map forest health conditions at landscape and over increasingly coarse scales.     

MODIS NDVI time-series allow the monitoring of Eucalyptus plantation biomass

The use of remote sensing is necessary for monitoring forest carbon stocks at large scales. Optical remote sensing, although not the most suitable technique for the direct estimation of stand biomass, offers the advantage of providing large temporal and spatial datasets. In particular, information on canopy structure is encompassed in stand reflectance time series. This study focused on the example of Eucalyptus forest plantations, which have recently attracted much attention as a result of their high expansion rate in many tropical countries. Stand scale time-series of Normalized Difference Vegetation Index (NDVI) were obtained from MODIS satellite data after a procedure involving un-mixing and interpolation, on about 15,000 ha of plantations in southern Brazil. The comparison of the planting date of the current rotation (and therefore the age of the stands) estimated from these time series with real values provided by the company showed that the root mean square error was 35.5 days. Age alone explained more than 82% of stand wood volume variability and 87% of stand dominant height variability. Age variables were combined with other variables derived from the NDVI time series and simple bioclimatic data by means of linear (Stepwise) or nonlinear (Random Forest) regressions. The nonlinear regressions gave r-square values of 0.90 for volume and 0.92 for dominant height, and an accuracy of about 25 m³/ha for volume (15% of the volume average value) and about 1.6 m for dominant height (8% of the height average value). The improvement including NDVI and bioclimatic data comes from the fact that the cumulative NDVI since planting date integrates the interannual variability of leaf area index (LAI), light interception by the foliage and growth due for example to variations of seasonal water stress. The accuracy of biomass and height predictions was strongly improved by using the NDVI integrated over the two first years after planting, which are critical for stand establishment. These results open perspectives for cost-effective monitoring of biomass at large scales in intensively-managed plantation forests.     

Inversion of a forest reflectance model to estimate structural canopy variables from hyperspectral remote sensing data

The potential of canopy reflectance modelling to retrieve simultaneously several structural variables in managed Norway spruce stands was investigated using the “Invertible Forest Reflectance Model”, INFORM. INFORM is an innovative extension of the FLIM model, with crown transparency, infinite crown reflectance and understory reflectance simulated using physically based sub-models (SAILH, LIBERTY and PROSPECT). The INFORM model was inverted with hyperspectral airborne HyMap data using a neural network approach. INFORM based estimates of forest structural variables were produced using site-specific ranges of stand structural variables. A relatively simple three layer feed-forward backpropagation neural network with two input neurons, one neuron in the hidden layer and three output neurons was employed to map leaf area index (LAI), crown coverage and stem density.To identify the optimum 2-band spectral subset to be used in the inversion process, all 2-band combinations of the HyMap dataset were systematically evaluated for model inversion. Field measurements of structural variables from 39 forest stands were used to validate the maps produced from HyMap imagery. Using two HyMap wavebands at 837 nm and 1148 nm the obtained accuracy of the LAI map amounts to an rmse of 0.58 (relative rmse = 18% of mean, R² = 0.73). With HyMap data resampled to Landsat TM spectral bands and using two “optimum” bands at 840 nm and 1650 nm, rmse was 0.66 and relative rmse 21%. In contrast to approaches based on empirical relations between spectral vegetation indices and structural variables, the main advantage of the inversion approach is that it does not require previous calibration.     

Continuous wavelet analysis for the detection of green attack damage due to mountain pine beetle infestation

Mountain pine beetle (Dendroctonus ponderosae Hopkins) is the most destructive insect infesting mature pine forests in North America and has devastated millions of hectares of forest in western Canada. Past studies have demonstrated the use of multispectral imagery for remote identification and mapping of visible or red attack damage in forests. This study aims to detect pre-visual or green attack damage in lodgepole pine needles by means of hyperspectral measurements, particularly via continuous wavelet analysis. Field measurements of lodgepole pine stands were conducted at two sites located northwest of Edmonton, Alberta, Canada. In June and August of 2007, reflectance spectra (350-2500 nm) were collected for 16 pairs of trees. Each of the 16 tree pairs included one control tree (healthy), and one stressed tree (girdled to simulate the effects of beetle infestation). In addition, during the period of June through October 2008, spectra were collected from 15 pairs of control- and beetle-infested trees. Spectra derived from these 31 tree pairs were subjected to a continuous wavelet transform, generating a scalogram that compiles the wavelet power as a function of wavelength location and scale of decomposition. Linear relationships were then explored between the wavelet scalograms and chemical properties or class labels (control and non-control) of the sample populations in order to isolate the most useful distinguishing spectral features that related to infested or girdled trees vs. control trees.A deficit in water content is observed in infested trees while an additional deficit in chlorophyll content is seen for girdled trees. The measurable water deficit of infested and girdled tree samples was detectable from the wavelet analysis of the reflectance spectra providing a novel method for the detection of green attack. The spectral features distinguishing control and infested trees are predominantly located between 950 and 1390 nm from scales 1 to 8. Of those, five features between 1318 to 1322 nm at scale 7 are consistently found in the July and August 2008 datasets. These features are located at longer wavelengths than those investigated in previous studies (below 1100 nm) and provide new insights into the potential remote detection of green attack. Spectral features that distinguish control and girdled trees were mostly observed between 1550 and 2370 nm from scales 1 to 5. The differing response of girdled and infested trees appears to indicate that the girdling process does not provide a perfect simulation of the effects caused by beetle infestation.It remains to be determined if the location of the 1318-1322 nm features, near the edge of a strong atmospheric water absorption band, will be sufficiently separable for use in airborne detection of green attack. A plot comparing needle water content and wavelet power at 1320 nm reveals considerable overlap between data derived from both infested and control samples, though the groups are statistically separable. This obstacle may preclude a high accuracy separation of healthy and infected single individuals, but establishing threshold identification levels may provide an economical, efficient and expeditious method for discriminating between healthy and infested tree populations.     

Mapping tree and shrub leaf area indices in an ombrotrophic peatland through multiple endmember spectral unmixing

Leaf area index (LAI) is an important parameter used by most process-oriented ecosystem models. LAI of forest ecosystems has routinely been mapped using spectral vegetation indices (SVI) derived from remote sensing imagery. The application of SVI-based approaches to map LAI in peatlands presents a challenge, mainly due to peatlands characteristic multi-layer canopy comprising shrubs and open, discontinuous tree canopies underlain by a continuous ground cover of different moss species, which reduces the greenness contrast between the canopy and the background.Our goal is to develop a methodology to map tree and shrub LAI in peatlands and similar ecosystems based on multiple endmember spectral mixture analysis (MESMA). This new mapping method is validated using LAI field measurements from a precipitation-fed (ombrotrophic) peatland near Ottawa, Ontario, Canada. We demonstrate first that three commonly applied SVI are not suitable for tree and shrub LAI mapping in ombrotrophic peatlands. Secondly, we demonstrate for a three-endmember model the limitations of traditional linear spectral mixture analysis (SMA) due to the unique and widely varying spectral characteristics of Sphagnum mosses, which are significantly different from vascular plants. Next, by using a geometric-optical radiative transfer model, we determine the nature of the equation describing the empirical relationship between shadow fraction and tree LAI using nonlinear ordinary least square (OLS) regression. We then apply this equation to describe the empirical relationships between shadow and shrub fractions obtained from mixture decomposition with SMA and MESMA, respectively, and tree and shrub LAI, respectively. Less accurate fractions obtained from SMA result in weaker relationships between shadow fraction and tree LAI (R² = 0.61) and shrub fraction and shrub LAI (R² = 0.49) compared to the same relationships based on fractions obtained from MESMA with R² = 0.75 and R² = 0.68, respectively. Cross-validation of tree LAI (R² = 0.74; RMSE = 0.48) and shrub LAI (R² = 0.68; RMSE = 0.42) maps using fractions from MESMA shows the suitability of this approach for mapping tree and shrub LAI in ombrotrophic peatlands. The ability to account for a spectrally varying, unique Sphagnum moss ground cover during mixture decomposition and a two layer canopy is particularly important.     

Effects of woody elements on simulated canopy reflectance: Implications for forest chlorophyll content retrieval

An important bio-indicator of actual plant health status, the foliar content of chlorophyll a and b (Cab), can be estimated using imaging spectroscopy. For forest canopies, however, the relationship between the spectral response and leaf chemistry is confounded by factors such as background (e.g. understory), canopy structure, and the presence of non-photosynthetic vegetation (NPV, e.g. woody elements)—particularly the appreciable amounts of standing and fallen dead wood found in older forests. We present a sensitivity analysis for the estimation of chlorophyll content in woody coniferous canopies using radiative transfer modeling, and use the modeled top-of-canopy reflectance data to analyze the contribution of woody elements, leaf area index (LAI), and crown cover (CC) to the retrieval of foliar Cab content. The radiative transfer model used comprises two linked submodels: one at leaf level (PROSPECT) and one at canopy level (FLIGHT). This generated bidirectional reflectance data according to the band settings of the Compact High Resolution Imaging Spectrometer (CHRIS) from which chlorophyll indices were calculated. Most of the chlorophyll indices outperformed single wavelengths in predicting Cab content at canopy level, with best results obtained by the Maccioni index ([R₇₈₀ − R₇₁₀] / [R₇₈₀ − R₆₈₀]). We demonstrate the performance of this index with respect to structural information on three distinct coniferous forest types (young, early mature and old-growth stands). The modeling results suggest that the spectral variation due to variation in canopy chlorophyll content is best captured for stands with medium dense canopies. However, the strength of the up-scaled Cab signal weakens with increasing crown NPV scattering elements, especially when crown cover exceeds 30%. LAI exerts the least perturbations. We conclude that the spectral influence of woody elements is an important variable that should be considered in radiative transfer approaches when retrieving foliar pigment estimates in heterogeneous stands, particularly if the stands are partly defoliated or long-lived.     

Evaluating the potential of multispectral imagery to map multiple stages of tree mortality

Insect outbreaks are major forest disturbances, causing tree mortality across millions of ha in North America. Resultant spatial and temporal patterns of tree mortality can profoundly affect ecosystem structure and function. In this study, we evaluated the classification accuracy of multispectral imagery at different spatial resolutions. We used four-band digital aerial imagery (30-cm spatial resolution and aggregated to coarser resolutions) acquired over lodgepole pine-dominated stands in central Colorado recently attacked by mountain pine beetle. Classes of interest included green trees and multiple stages of post-insect attack tree mortality, including dead trees with red needles (“red-attack”), dead trees without needles (“gray-attack”), and non-forest. The 30-cm resolution image facilitated delineation of trees located in the field, which were used in image classification. We employed a maximum likelihood classifier using the green band, Red-Green Index (RGI), and Normalized Difference Vegetation Index (NDVI). Pixel-level classification accuracies using this imagery were good (overall accuracy of 87%, kappa = 0.84), although misclassification occurred between a) sunlit crowns of live (green) trees and herbaceous vegetation, and b) sunlit crowns of gray- and red-attack trees and bare soil. We explored the capability of coarser resolution imagery, aggregated from the 30-cm resolution to 1.2, 2.4, and 4.2 m, to improve classification accuracy. We found the highest accuracy at the 2.4-m resolution, where reduction in omission and commission errors and increases in overall accuracy (90%) and kappa (0.88) were achieved, and visual inspection indicated improved mapping. Pixels at this resolution included more shadow in forested regions than pixels in finer resolution imagery, thereby reducing forest canopy reflectance and allowing improved separation between forest and non-forest classes, yet were fine enough to resolve individual tree crowns better than the 4.2-m imagery. Our results illustrate that a classification of an image with a spatial resolution similar to the area of a tree crown outperforms that of finer and coarser resolution imagery for mapping tree mortality and non-forest classes. We also demonstrate that multispectral imagery can be used to separate multiple postoutbreak attack stages (i.e., red-attack and gray-attack) from other classes in the image.     

Measuring forest structure and biomass in New England forest stands using Echidna ground-based lidar

A ground-based, upward-scanning, near-infrared lidar, the Echidna® validation instrument (EVI), built by CSIRO Australia, retrieves forest stand structural parameters, including mean diameter at breast height (DBH), stem count density (stems/area), basal area, and above-ground woody biomass with very good accuracy in six New England hardwood and conifer forest stands. Comparing forest structural parameters retrieved using EVI data with extensive ground measurements, we found excellent agreement at the site level using five EVI scans (plots) per site (R² = 0.94-0.99); very good agreement at the plot level for stem count density and biomass (R² = 0.90-0.85); and good agreement at the plot level for mean DBH and basal area (R² = 0.48-0.66). The observed variance at site and plot levels suggest that a sample area of at least 1 ha (10⁴ m²) is required to estimate these parameters accurately at the stand level using either lidar-based or conventional methods. The algorithms and procedures used to retrieve these structural parameters are dependent on the unique ability of the Echidna® lidar to digitize the full waveform of the scattered lidar pulse as it returns to the instrument, which allows consistent separation of scattering by trunks and large branches from scattering by leaves. This successful application of ground-based lidar technology opens the door to rapid and accurate measurement of biomass and timber volume in areal sampling scenarios and as a calibration and validation tool for mapping biomass using airborne or spaceborne remotely sensed data.     

Measuring effective leaf area index, foliage profile, and stand height in New England forest stands using a full-waveform ground-based lidar

Effective leaf area index (LAI) retrievals from a scanning, ground-based, near-infrared (1064 nm) lidar that digitizes the full return waveform, the Echidna Validation Instrument (EVI), are in good agreement with those obtained from both hemispherical photography and the Li-Cor LAI-2000 Plant Canopy Analyzer. We conducted trials at 28 plots within six stands of hardwoods and conifers of varying height and stocking densities at Harvard Forest, Massachusetts, Bartlett Experimental Forest, New Hampshire, and Howland Experimental Forest, Maine, in July 2007. Effective LAI values retrieved by four methods, which ranged from 3.42 to 5.25 depending on the site and method, were not significantly different (β < 0.1 among four methods). The LAI values also matched published values well. Foliage profiles (leaf area with height) retrieved from the lidar scans, although not independently validated, were consistent with stand structure as observed and as measured by conventional methods. Canopy mean top height, as determined from the foliage profiles, deviated from mean RH100 values obtained from the Lidar Vegetation Imaging Sensor (LVIS) airborne large-footprint lidar system at 27 plots by − 0.91 m with RMSE = 2.04 m, documenting the ability of the EVI to retrieve stand height. The Echidna Validation Instrument is the first realization of the Echidna® lidar concept, devised by Australia's Commonwealth Scientific and Industrial Research Organization (CSIRO), for measuring forest structure using full-waveform, ground-based, scanning lidar.     

Using hyperspectral remote sensing to detect and quantify southeastern pine senescence effects in red-cockaded woodpecker (Picoides borealis) habitat

Conservation of threatened and endangered species requires maintenance of critical habitat. The red-cockaded woodpecker Picoides borealis (RCW) is a threatened bird species, endemic to the mixed conifer forests of the southeastern United States. RCW nests and forages preferentially in mature longleaf pine Pinus palustris, but also uses mature loblolly pine Pinus taeda and shortleaf pine Pinus echinata forests. In the last century, the extent of mature pine forests has been greatly reduced by logging. The RCW, in contrast to other woodpeckers, excavates nest cavities in living trees and senescence symptoms (year round leaf chlorosis and leaf mortality) have been observed in mature pine stands across the southeast. Widespread mortality of the mature pine forests would threaten the long-term survival of the RCW. We used airborne hyperspectral data across a portion of Ft. Benning Military Installation, Georgia, U.S.A., to determine if senescent trees can be identified and mapped and assess the likely persistence of mature pines in the RCW habitat. Univariate analysis of variance showed good separation between asymptomatic, senesced and dead physiological conditions with asymptomatic trees having significantly higher reflectance for all bands in the wavelength range between 0.719 and 1.1676 µm, senescent trees having significantly lower reflectance for bands in the range between 1.1927 and 1.3122 µm, and dead trees having significantly higher reflectance for bands in the range between 1.8151 and 1.9471 µm. Classification and Regression Tree (CART) models achieved correct classification rates and kappa statistics above 70%. CART models selected information from wavelength regions similar to those identified from the ANOVA, which likely explains their performance. Our aggregated CART model of tree senescence estimated that 141.4 ha (3%) of the study area is affected. RCW nests occurred in areas with significantly higher tree cover, and trees within foraging and home ranges did not have significantly more senescence than areas without RCW. These results indicate that although tree senescence is widespread, mortality is yet to significantly affect RCW habitat. Results and analysis of critical habitat similar to those exemplified in this study can extend our knowledge about the stressors of these important and imperiled components of biodiversity.