Nanoparticle-induced exosomes target antigen-presenting cells to initiate Th1-type immune activation

The mechanisms associated with the induction of systemic immune responses by nanoparticles are not fully understood, but their elucidation is critical to address safety issues associated with the broader medical application of nanotechnology. In this study, a key role of nanoparticle-induced exosomes (extracellularly secreted membrane vesicles) as signaling mediators in the induction of T helper cell type 1 (Th1) immune activation is demonstrated. In vivo exposure to magnetic iron oxide nanoparticles (MIONs) results in significant exosome generation in the alveolar region of Balb/c mice. These act as a source of nanoparticle-induced, membrane-bound antigen/signaling cargo, which transfer their components to antigen-presenting cells (APCs) in the reticuloendothelial system. Through exosome-initiated signals, immature dendritic cells (iDCs) undergo maturation and differentiation to the DC1 subtype, while macrophages go through classical activation and differentiation to the M1 subtype. Simultaneously, iDCs and macrophages release various Th1 cytokines (including interleukin-12 and tumor necrosis factor α) driving T-cell activation and differentiation. Activated APCs (especially DC1 and M1 subtypes) consequently prime T-cell differentiation towards a Th1 subtype, thereby resulting in an orchestrated Th1-type immune response. Th1-polarized immune activation is associated with delayed-type hypersensitivity, which might underlie the long-term inflammatory effects frequently associated with nanoparticle exposure. These studies suggest that nanoparticle-induced exosomes provoke the immune activation and inflammatory responses that can accompany nanoparticle exposure.     

Nanoparticle-induced enhancement and suppression of photocurrent in a silicon photodiode

Nanoparticles are capable of both enhancing and suppressing the photocurrent in a silicon diode when deposited on the active face of the device. Photocurrent imaging of the individual nanoparticles and nanoparticle aggregates responsible for this effect reveals that Au nanospheres, nanoshells, and nanoshell dimers each exhibit unique wavelength-dependent suppression-enhancement characteristics. In contrast, silica nanospheres provide a sizable and relatively uniform photocurrent enhancement across the same spectral range (532-980 nm). Unusual light-harvesting behavior observed correlates with a highly complex energy flow (optical "vortexing") for the forward scattered light of plasmon resonant nanoparticles into the device.     

Chitosan/hyaluronic acid/plasmid-DNA nanoparticles encoding interleukin-1 receptor antagonist attenuate inflammation in synoviocytes induced by interleukin-1 beta

Synovial inflammation mainly resulting from interleukin-1 beta (IL-1β) plays a crucial role in the early and late stage of osteoarthritis. Recent progress in therapeutic gene delivery systems has led to promising strategies for local sustained target gene expression. The aim of this study was to design a nanoparticle made of chitosan (CS)/hyaluronic acid (HA)/plasmid-DNA (pDNA) encoding IL-1 receptor antagonist gene (pIL-1Ra) and furtherly use it to transfect the primary synoviocytes, and then investigate whether CS/HA/pIL-1Ra nanoparticles could make the synoviocytes overexpress functional IL-1Ra to attenuate inflammation induced by IL-1β. In this study, CS was modified with HA to generate CS/HA nanoparticles and then combined with pIL-1Ra to form CS/HA/pIL-1Ra nanoparticles. The physicochemical characteristics results showed that CS/HA nanoparticles exhibited an appropriate particle size (144.9?±?2.8?nm) and positive zeta potential (?+?28?mV). The gel retardation assay revealed that pDNA was effectively protected and released in a sustained manner more than 15 days. Cytotoxicity results showed that CS/HA/pIL-1Ra nanoparticles had a safe range (0-80?μg/ml) for the application to synoviocytes. RT-qPCR and western blot analysis demonstrated that CS/HA/pIL-1Ra nanoparticles were able to increase IL-1Ra expression in primary synoviocytes, and reduce the mRNA and protein levels of matrix metalloproteinase-3 (MMP-3), matrix metalloproteinase-13 (MMP-13), cyclooxygenase-2 (COX-2) and inducible nitric oxide synthase (iNOS) in IL-1β-induced synoviocytes. Our findings indicated that CS/HA/pIL-1Ra nanoparticles efficiently transfected synoviocytes and attenuated synovitis induced by IL-1β, which will provide a potential strategy for OA synovitis.

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Gas-phase compaction and unfolding of protein structures

Ion-mobility mass spectrometry is emerging as a powerful tool for studying the structures of less established protein assemblies. The method provides simultaneous measurement of the mass and size of intact protein assemblies, providing information not only on the subunit composition and network of interactions but also on the overall topology and shape of protein complexes. However, how the experimental parameters affect the measured collision cross-sections remains elusive. Here, we present an extensive systematic study on a range of proteins and protein complexes with differing sizes, structures, and oligomerization states. Our results indicate that the experimental parameters, T-wave height and velocity, influence the determined collision cross-section independently and in opposite directions. Increasing the T-wave height leads to compaction of the protein structures, while higher T-wave velocities lead to their expansion. These different effects are attributed to differences in energy transmission and dissipation rates. Moreover, by analyzing proteins in their native and denatured states, we could identify the lower and upper boundaries of the collision cross-section, which reflect the "maximally packed" and "ultimately unfolded" states. Together, our results provide grounds for selecting optimal experimental parameters that will enable preservation of the nativelike conformation, providing structural information on uncharacterized protein assemblies.     

Measurement and unfolding of neutron spectra using Bonner spheres

Neutron spectra from Am-Be, 252Cf sources and 2H + 2H and 2H + 3H reactions have been measured using a Bonner sphere system in conjunction with a 4 x 4 mm2 LiI(Eu) detector, and unfolded using the two codes BUNKI and MAXED. The BON unfolding algorithm is used with BUNKI. It has been observed that end test percentage between 1 and 3 and smoothing factor between 0.05 and 0.1 are optimal choices for the BUNKI code. A temperature parameter 1.0 is used for MAXED. Comparison with standard spectra shows that the shape of the spectra is fairly well reproduced. A coupling between the two codes is made and the solution spectrum from BUNKI is used as the default spectrum in MAXED.     

Fluctuations in T cell receptor and pMHC interactions regulate T cell activation

Adaptive immune responses depend on interactions between T cell receptors (TCRs) and peptide major histocompatibility complex (pMHC) ligands located on the surface of T cells and antigen presenting cells (APCs), respectively. As TCRs and pMHCs are often only present at low copy numbers their interactions are inherently stochastic, yet the role of stochastic fluctuations on T cell function is unclear. Here, we introduce a minimal stochastic model of T cell activation that accounts for serial TCR-pMHC engagement, reversible TCR conformational change and TCR aggregation. Analysis of this model indicates that it is not the strength of binding between the T cell and the APC cell per se that elicits an immune response, but rather the information imparted to the T cell from the encounter, as assessed by the entropy rate of the TCR-pMHC binding dynamics. This view provides an information-theoretic interpretation of T cell activation that explains a range of experimental observations. Based on this analysis, we propose that effective T cell therapeutics may be enhanced by optimizing the inherent stochasticity of TCR-pMHC binding dynamics.     

转拟南芥AtNHX1基因促进烟草对钾吸收的研究

提取拟南芥总RNA,反转录合成Na /H 逆向转运蛋白基因AtNHX1,构建了植物高效表达载体,用叶盘法将其导入烟草,经筛选获得了抗卡那霉素和GUS染色阳性的转化子38株.应用荧光定量PCR方法对转化材料部分含AtNHX1基因的烟草内源钾通道基因、烟草K 转运蛋白基因和烟草焦磷酸酶基因的转录水平进行了分析.结果表明:在转化烟草中可以检测到AtNHX1基因mRNA,与未转化材料相比,烟草钾离子转运蛋白基因NtHAK1的转录降低,H -ATPase基因NHA1转录增加,钾通道基因NKT转录无显著变化,T1代转化烟叶中K 含量显著增加,Na 、Ca2 无显著变化,烟叶中总糖含量降低,证明了编码拟南芥AtNHX1基因与植物的K 吸收有关.     

The role of ECL2 in CGRP receptor activation: a combined modelling and experimental approach

The calcitonin gene-related peptide (CGRP) receptor is a complex of a calcitonin receptor-like receptor (CLR), which is a family B G-protein-coupled receptor (GPCR) and receptor activity modifying protein 1. The role of the second extracellular loop (ECL2) of CLR in binding CGRP and coupling to Gs was investigated using a combination of mutagenesis and modelling. An alanine scan of residues 271–294 of CLR showed that the ability of CGRP to produce cAMP was impaired by point mutations at 13 residues; most of these also impaired the response to adrenomedullin (AM). These data were used to select probable ECL2-modelled conformations that are involved in agonist binding, allowing the identification of the likely contacts between the peptide and receptor. The implications of the most likely structures for receptor activation are discussed.     

Attitudes, order and quantity: deterministic and direct probabilistic tests of unidimensional unfolding

This article is the final in the series on unidimensional unfolding. The investigations of Kyngdon (2006b) and Michell (1994) were extended to include direct probabilistic tests of the quantitative and ordinal components of unfolding theory with the multinomial Dirichlet model (Karabatsos 2005); and tests of the higher order axiomatic conjoint measurement (ACM, Krantz, Luce, Suppes and Tversky (KLST) 1971) condition of triple cancellation. Strong Dirichlet model support for both the ordinal and quantitative components of unfolding was only found in datasets that satisfied at least double cancellation. In contrast, the Item Response Theory (IRT) simple hyperbolic cosine model for pairwise preferences (SHCMpp, Andrich 1995) fitted all datasets. The paper concluded the SHCMpp is suited to the instrumental rather than scientific task (Michell 2000) of psychological measurement; with the caveat of the problematic chi square fit statistic. The paper also presents original work by the second author on coherent tests of triple cancellation.     

Detection of albumin unfolding preceding proteolysis using Fourier transform infrared spectroscopy and chemometric data analysis

The hydrolysis of bovine serum albumin with protease K at 60 degrees C has been studied by means of infrared spectroscopy. Two-dimensional correlation spectroscopy (2DCoS) has been used to study spectral changes in the reaction. The use of the multivariate curve resolution-alternating least-squares method applied to infrared measurements allowed the recovery of pure infrared spectra and concentration profiles of the different species involved in the reaction. Special attention was paid to the careful inspection of residuals again using 2DCoS. In this way, a heat-induced unfolding step previous to protein hydrolysis was identified. The infrared spectra of the intermediate species showed a more disordered structure than native albumin, the decrease in alpha-helix conformation being especially noticeable. The formation of beta-sheet aggregates due to heating was detected too.     

New surface flattening scheme and its application in the visualization of the human cortex unfolding

Abstract

It is a difficult problem to interpret the spatial relationship between different locations on the human cortical surface. The main reason for this difficulty is that the surface of the human cerebral cortex is highly folded and therefore much of it is obscured from view. In this paper, we present an efficient and distortion‐less flattening algorithm to unfold the cortical surface. Using the proposed technique, we can quickly visualize and precisely measure the cortical surface. Experimental results are shown to evaluate the usefulness of the proposed method.     

Near-infrared spectroscopy for in-line monitoring of protein unfolding and its interactions with lyoprotectants during freeze-drying

This work presents near-infrared spectroscopy (NIRS) as an in-line process analyzer for monitoring protein unfolding and protein-lyoprotectant hydrogen bond interactions during freeze-drying. By implementing a noncontact NIR probe in the freeze-drying chamber, spectra of formulations containing a model protein immunoglobulin G (IgG) were collected each process minute. When sublimation was completed in the cake region illuminated by the NIR probe, the frequency of the amide A/II band (near 4850 cm(-1)) was monitored as a function of water elimination. These two features were well correlated during protein dehydration in the absence of protein unfolding (desired process course), whereas consistent deviations from this trend to higher amide A/II frequencies were shown to be related to protein unfolding. In formulations with increased sucrose concentrations, the markedly decreased amide A/II frequencies seen immediately after sublimation indicated an increased extent of hydrogen bond interaction between the protein's backbone and surrounding molecules. At the end of drying, there was evidence of nearly complete water substitution for formulations with 1%, 5%, and 10% sucrose. The presented approach shows promising perspectives for early fault detection of protein unfolding and for obtaining mechanistic process information on actions of lyoprotectants.     

活性中间相炭微球的制备及机理研究

以中间相炭微球(MCMBs)为原料,采用KOH、K2CO3分别对MCMBs进行活化,比较活化效果,发现KOH是一种有效的活化剂,通过KOH活化制备出比表面积达2775 m2/g的活性炭.对活性炭进行XRD、BET比表面积与SEM分析,发现活化后MCMBs的石墨微晶结构被破坏,所制得的活性炭是由无定形组织构成的.活化机理为一系列的化学反应与钾插入石墨微品片层的共同作用.     

Chemical, thermal, and electric field induced unfolding of single protein molecules studied using nanopores

Single-molecule experimental techniques have recently shown to be of significant interest for use in numerous applications in both the research laboratory and industrial settings. Although many single-molecule techniques exist, the nanopore platform is perhaps one of the more popular techniques due to its ability to act as a molecular sensor of biological macromolecules. For example, nanopores offer a unique, new method for probing various properties of proteins and can contribute to elucidating key biophysical information in conjunction with existing techniques. In the present study, various forms of bovine serum albumin (BSA) are detected including thermally refolded BSA, urea-denatured BSA, and multiple forms of BSA detected at elevated electric field strengths (with and without urea). We also provide excluded volume measurements for each of these states that normally are difficult to obtain due to unknown and unstable protein conformations.     

Spectrum unfolding,sensitivity analysis and propagation of uncertainties with the maximum entropy deconvolution code MAXED

MAXED was developed to apply the maximum entropy principle to the unfolding of neutron spectrometric measurements. The approach followed in MAXED has several features that make it attractive: it permits inclusion of a priori information in a well-defined and mathematically consistent way, the algorithm used to derive the solution spectrum is not ad hoc (it can be justified on the basis of arguments that originate in information theory), and the solution spectrum is a non-negative function that can be written in closed form. This last feature permits the use of standard methods for the sensitivity analysis and propagation of uncertainties of MAXED solution spectra. We illustrate its use with unfoldings of NE 213 scintillation detector measurements of photon calibration spectra, and of multisphere neutron spectrometer measurements of cosmic-ray induced neutrons at high altitude (∼20 km) in the atmosphere.     

Analysis of an intact G-protein coupled receptor by MALDI-TOF mass spectrometry: molecular heterogeneity of the tachykinin NK-1 receptor

Integral membrane proteins are among the most challenging targets for biomedical research as most important cellular functions are tied to these proteins. To analyze intrinsically their structure/function, their transduction mechanism, or both, these proteins are commonly expressed in cultured cells as recombinant proteins. However, it is not possible to check whether these recombinant proteins are homogeneously or heterogeneously expressed. Owing to difficulties in their purification, very few mass spectrometry studies have been performed with those proteins and even less with G-protein coupled receptors. Here we have set up a procedure that is highly compatible with MALDI-TOF mass spectrometry to analyze an intact histidine-tagged G-protein coupled, namely, the tachykinin NK-1 receptor expressed in CHO cells, solubilized and purified using cobalt or nickel chelating magnetic beads. The metal-chelating magnetic beads containing the receptor were directly spotted on the MALDI plate for analysis. SDS-PAGE, combined with in-gel digestion analyzed by mass spectrometry, Western blot ((His)6 and FLAG M2 tags), photoaffinity labeling with a radioactive agonist, and Edman sequencing, confirmed the identity of the purified protein as the human tachykinin NK-1 receptor. Mass spectrometry study of both the glycosylated and deglycosylated intact protein forms revealed the existence of several receptor species that is tempting to correlate with the unusual pharmacological behavior of the receptor.     

Thrombotic events and markers of oxidation and inflammation in hemodialysis

The goal of this study was to determine whether antioxidant therapy with vitamin E would alter the rate of vascular access complications or other macrovascular complications in hemodialysis (HD) patients. A secondary goal of the study was to explore the relationship between baseline pretreatment markers of oxidative stress (the advanced glycation end product pentosidine and basal levels of vitamin Eα and γ) and the subsequent development of access failure. Thirty‐five stable patients treated by HD were recruited for the study. Patients were provided with vitamin E (800 IU) or placebo capsules to be taken daily. Clinical variables, vascular access function (flow meter access flow measurements), and circulating blood markers were obtained initially and every 3 months throughout the study. Vitamin Eα levels rose in treated patients from 12.7 ± 4.4 to 25.1 ± 15.1 µg/mL at 3 months and 28.6 ± 14.8 µg/mL at 6 months. Vitamin Eγ levels fell in treated patients from 3.9 ± 1.7 to 2.3 ± 1.5 µg/mL at 3 months and 1.7 µg/mL at 6 months. Patients who subsequently developed repeated thrombotic vascular access events were characterized by higher baseline pentosidine content of circulating proteins. Patients who developed a myocardial infarction had higher pentosidine, lower vitamin Eα, and much lower vitamin Eγ than patients who did not develop thrombotic events. These findings lead to the speculation that the anti‐inflammatory effects of vitamin Eγ may play a more important role in thrombotic vascular events than the antioxidant effects of vitamin Eα. Additional studies of these interactions are in progress.     

壳聚糖脱乙酰度对海藻酸钠/壳聚糖微胶囊的表面性质及蛋白吸附的影响

采用流动电势技术、 接触角技术及表面轮廓技术分别考察了由不同脱乙酰度壳聚糖制备的海藻酸钠/壳聚糖(ACA)膜的表面电荷分布、 表面亲疏水性、 表面粗糙度, 并以纤维蛋白原为模型, 采用静态吸附实验技术考察了表面性质对蛋白在ACA微胶囊表面的吸附量及吸附构象的影响。结果表明, ACA微胶囊表面净电荷为负, 表面正电荷随脱乙酰度的降低而减少。由脱乙酰度60%~90%壳聚糖制备的ACA膜的表面接触角均为70°左右, 且无显著性差异。ACA微胶囊表面呈颗粒状结构, 表面粗糙度随壳聚糖脱乙酰度的降低而减小。蛋白吸附分析表明, "棒状"的纤维蛋白原分子以"侧向"和"直立" 2种形式吸附于ACA微胶囊表面。当壳聚糖脱乙酰度较低时, 蛋白吸附量较小, 且此时蛋白多以"直立"形式吸附。以上结果表明, 由壳聚糖脱乙酰度带来的ACA微胶囊表面性质差异不仅影响了蛋白吸附量, 而且影响了蛋白吸附方式。      

A long-lasting oral preformulation of the angiotensin II AT1 receptor antagonist losartan

Losartan (Los), a non-peptidic orally active agent, reduces arterial pressure through specific and selective blockade of angiotensin II receptor AT1. However, this widely used AT1 antagonist presents low bioavailability and needs once or twice a day dosage. In order to improve its bioavailability, we used the host: guest strategy based on β-cyclodextrin (βCD). The results suggest that Los included in βCD showed a typical pulsatile release pattern after oral administration to rats, with increasing the levels of plasma of Los. In addition, the inclusion compound presented oral efficacy for 72?h, in contrast to Los alone, which shows antagonist effect for only 6?h. In transgenic (mREN2)L27 rats, the Los/βCD complex reduced blood pressure for about 6?d, whereas Los alone reduced blood pressure for only 2?d. More importantly, using this host: guest strategy, sustained release of Los for over a week via the oral route can be achieved without the need for encapsulation in a polymeric carrier. The proposed preformulation increased the efficacy reducing the dose or spacing between each dose intake.     

Probing the unfolding and refolding processes of carbonic anhydrase 2 using electrospray ionization mass spectrometry combined with pH jump

A novel method for proving the time course of the unfolding and refolding processes of metalloprotein bovine carbonic anhydrase 2 (CA2) is demonstrated using electrospray ionization mass spectrometry (ESI MS) combined with pH jumps between 3.6 and 4.4. The shift in mass accompanied by the release or coordination of a zinc ion and the change in the charge state distribution were measured to evaluate the folding process. The time course of the ESI mass spectra revealed the existence of four types of ions in the experimental system, i.e., lower charged apo-CA2 and holo-CA2 ions and higher charged apo-CA2 and holo-CA2 ions. The deconvolution spectrum of the ion peak ensemble for each type of ion was processed and time course plots of the relative intensities of the four ions were prepared in order to analyze the folding processes. These analyses revealed the coexistence of two folding states of the lower and higher charged apo-CA2 under the condition of pH 3.6. The lower and higher charged apoproteins spontaneously refolded to the lower charged holoprotein by a pH jump from 3.6 to 4.4 without the addition of an extra zinc ion. The higher charged holoprotein observed during both the unfolding and refolding processes was considered to be an intermediate of the change in folding. The present study indicates that ESI MS combined with pH jump would be a powerful method to probe the unfolding and refolding of proteins. This method simultaneously measures mass spectra and analyzes the folding processes as a function of time using deconvolution spectra constructed by selecting a suitable m/z range for the analysis from the peaks of charge state distributions.