Performance analysis of computer aided brain tumor detection system using ANFIS classifier

The abrupt changes in brain cells due to the environmental effects or genetic disorders leads to form the abnormal lesions in brain. These abnormal lesions are combined as mass and known as tumor. The detection of these tumor cells in brain image is a complex task due to the similarities between normal cells and tumor cells. In this paper, an automated brain tumor detection and segmentation methodology is proposed. The proposed method consists of feature extraction, classification and segmentation. In this paper, Grey Level Co‐Occurrence Matrix (GLCM), Discrete Wavelet Transform (DWT) and Law's texture features are used as features. These features are fed to Adaptive Neuro Fuzzy Inference System (ANFIS) classifier as input pattern, which classifies the brain image. Morphological operations are now applied on the classified abnormal brain image to segment the tumor regions. The proposed system achieves 95.07% of sensitivity, 99.84% of specificity and 99.80% of accuracy for tumor segmentation.     

A Novel Hybrid Machine Learning Approach for Classification of Brain Tumor Images

Abnormal growth of brain tissues is the real cause of brain tumor. Strategy for the diagnosis of brain tumor at initial stages is one of the key step for saving the life of a patient. The manual segmentation of brain tumor magnetic resonance images (MRIs) takes time and results vary significantly in low-level features. To address this issue, we have proposed a ResNet-50 feature extractor depended on multilevel deep convolutional neural network (CNN) for reliable images segmentation by considering the low-level features of MRI. In this model, we have extracted features through ResNet-50 architecture and fed these feature maps to multi-level CNN model. To handle the classification process, we have collected a total number of 2043 MRI patients of normal, benign, and malignant tumor. Three model CNN, multi-level CNN, and ResNet-50 based multi-level CNN have been used for detection and classification of brain tumors. All the model results are calculated in terms of various numerical values identified as precision (P), recall (R), accuracy (Acc) and f1-score (F1-S). The obtained average results are much better as compared to already existing methods. This modified transfer learning architecture might help the radiologists and doctors as a better significant system for tumor diagnosis.     

A fuzzy logic‐based meningioma tumor detection in magnetic resonance brain images using CANFIS and U‐Net CNN classification

This article develops a methodology for meningioma brain tumor detection process using fuzzy logic based enhancement and co‐active adaptive neuro fuzzy inference system and U‐Net convolutional neural network classification methods. The proposed meningioma tumor detection process consists of the following stages as, enhancement, feature extraction, and classifications. The enhancement of the source brain image is done using fuzzy logic and then dual tree‐complex wavelet transform is applied to this enhanced image at different levels of scale. The features are computed from the decomposed sub band images and these features are further classified using CANFIS classification method which identifies the meningioma brain image from nonmeningioma brain image. The performance of the proposed meningioma brain tumor detection and segmentation system is analyzed in terms of sensitivity, specificity, segmentation accuracy, and Dice coefficient index with detection rate.     

Image registration-based brain tumor detection and segmentation using ANFIS classification approach

Abnormal cells in human brain lead to the development of tumors. Manual detection of this tumor region is a time-consuming process. Hence, this paper proposes an efficient and automated computer-aided methodology for brain tumor detection and segmentation using image registration technique and classification approaches. This proposed work consists of the following modules: image registration, contourlet transform, and feature extraction with feature normalization, classification, and segmentation. The extracted features are optimized using genetic algorithm, and then an adaptive neuro-fuzzy inference system classification approach is used to classify the features for the detection and segmentation of tumor regions in brain magnetic resonance imaging. A quantitative analysis is performed to evaluate the proposed methodology for brain tumor detection using sensitivity, specificity, segmentation accuracy, precision, and Dice similarity coefficient.     

Performance analysis of brain tissues and tumor detection and grading system using ANFIS classifier

Abnormal growth of cells in brain leads to the formation of tumors, which are categorized into benign and malignant. In this article, Co‐Active Adaptive Neuro Fuzzy Inference System (CANFIS) classification based brain tumor detection and its grading system is proposed. It has two phases as brain tumor segmentation and brain tissue segmentation. In brain tumor segmentation, CANFIS classifier is used to classify the test brain image into benign or malignant. Then, morphological operations are applied over the malignant image in order to segment the tumor regions in brain image. The K‐means classifier is used to classify the brain tissues into Grey Matter (GM), White Matter (WM) and Cerebro Spinal Fluid (CSF) regions as three different classes. Next, the segmented tumor is graded as mild, moderate or severe based on the presence of segmented tumor region in brain tissues.     

Effectiveness of Deep Learning Models for Brain Tumor Classification and Segmentation

A brain tumor is a mass or growth of abnormal cells in the brain. In children and adults, brain tumor is considered one of the leading causes of death. There are several types of brain tumors, including benign (non-cancerous) and malignant (cancerous) tumors. Diagnosing brain tumors as early as possible is essential, as this can improve the chances of successful treatment and survival. Considering this problem, we bring forth a hybrid intelligent deep learning technique that uses several pre-trained models (Resnet50, Vgg16, Vgg19, U-Net) and their integration for computer-aided detection and localization systems in brain tumors. These pre-trained and integrated deep learning models have been used on the publicly available dataset from The Cancer Genome Atlas. The dataset consists of 120 patients. The pre-trained models have been used to classify tumor or no tumor images, while integrated models are applied to segment the tumor region correctly. We have evaluated their performance in terms of loss, accuracy, intersection over union, Jaccard distance, dice coefficient, and dice coefficient loss. From pre-trained models, the U-Net model achieves higher performance than other models by obtaining 95% accuracy. In contrast, U-Net with ResNet-50 outperforms all other models from integrated pre-trained models and correctly classified and segmented the tumor region.     

Development of computer‐aided approach for brain tumor detection using random forest classifier

The nonlinear development of cells in brain region forms the abnormal patterns in brain in the form of tumors. It is necessary to detect and diagnose the brain tumors in an automated manner using computer‐aided approaches at large population areas. The noises in brain magnetic resonance image is detected and reduced as preprocessing steps and then grey level co‐occurrence matrix are now extracted from the preprocessed brain image. In this article, random forest classifier‐based brain tumor detection and segmentation methodology is proposed to classify the brain image into normal or abnormal. The proposed brain tumor detection and segmentation system is analyzed in terms of sensitivity, specificity, false‐positive rate, false‐negative rate, likelihood ratio positive, and likelihood ratio negative.     

Fully automatic multisegmentation approach for magnetic resonance imaging brain tumor detection using improved region-growing and quasi-Monte Carlo-expectation maximization algorithm

Magnetic resonance imaging (MRI) is widely used in the medical field, especially for detecting serious abnormalities affecting the organs of the human body, such as tumors. Automatic detection of tumors needs high-performance recognition techniques. In this paper, we have developed a new automatic method based on the multisegmentation of brain tumor region. We used an improved region-growing algorithm, which is based on quasi-Monte Carlo and expectation maximization methods to define the desired classes. Several metrics were calculated to evaluate the performance of our technique. The fully automatic multisegmentation approach, developed in this study, showed good performance, and it can offer a new option to replace conventional techniques used for tumor detection in MRI images.     

A computer‐aided approach for meningioma brain tumor detection using CANFIS classifier

Abnormal growth of cells in brain leads to the formation of tumors in brain. The earlier detection of the tumors in brain will save the life of the patients. Hence, this article proposes a computer‐aided fully automatic methodology for brain tumor detection using Co‐Active Adaptive Neuro Fuzzy Inference System (CANFIS) classifier. The internal region of the brain image is enhanced using image normalization technique and further contourlet transform is applied on the enhanced brain image for the decomposition with different scales. The grey level and heuristic features are extracted from the decomposed coefficients and these features are trained and classified using CANFIS classifier. The performance of the proposed brain tumor detection is analyzed in terms of classification accuracy, sensitivity, specificity, and segmentation accuracy.     

Glioma tumor detection in brain MRI image using ANFIS‐based normalized graph cut approach

Glioma is the severe type of brain tumor which leads to immediate death for the case high‐grade Glioma. The Glioma tumor patient in case of low grade can extend their life period if tumor is timely detected and providing proper surgery. In this article, a computer‐aided fully automated Glioma brain tumor detection and segmentation system is proposed using Adaptive Neuro Fuzzy Inference System (ANFIS) classifier based Graph cut approach. Initially, orientation analysis is performed on the brain image to obtain the edge enhanced abnormal regions in the brain. Then, features are extracted from the orientation enhanced image and these features are trained and classified using ANFIS classifier to classify the test brain image into either normal or abnormal. Normalized Graph cur segmentation methodology is applied on the classified abnormal brain image to segment the tumor region. The proposed Glioma tumor segmentation method is validated using the metric parameters as sensitivity, specificity, accuracy and dice similarity coefficient.     

Brain tumor severity analysis using modified multi‐texton histogram and hybrid kernel SVM

Magnetic resonance image (MRI) segmentation refers to a process of assigning labels to set of pixels or multiple regions. It plays a major role in the field of biomedical applications as it is widely used by the radiologists to segment the medical images input into meaningful regions. In recent years, various brain tumor detection techniques are presented in the literature. In this article, we have developed an approach to brain tumor detection and severity analysis is done using the various measures. The proposed approach comprises of preprocessing, segmentation, feature extraction, and classification. In preprocessing steps, we need to perform skull stripping and then, anisotropic filtering is applied to make image suitable for extracting features. In feature extraction, we have modified the multi‐texton histogram (MTH) technique to improve the feature extraction. In the classification stage, the hybrid kernel is designed and applied to training of support vector machine to perform automatic detection of tumor region in MRI images. For comparison analysis, our proposed approach is compared with the existing works using K‐cross fold validation method. From the results, we can conclude that the modified multi‐texton histogram with non‐linear kernels has shown the accuracy of 86% but the MTH with non‐linear kernels shows the accuracy of 83.8%.     

An efficient and automatic glioblastoma brain tumor detection using shift‐invariant shearlet transform and neural networks

The detection and segmentation of tumor region in brain image is a critical task due to the similarity between abnormal and normal region. In this article, a computer‐aided automatic detection and segmentation of brain tumor is proposed. The proposed system consists of enhancement, transformation, feature extraction, and classification. The shift‐invariant shearlet transform (SIST) is used to enhance the brain image. Further, nonsubsampled contourlet transform (NSCT) is used as multiresolution transform which transforms the spatial domain enhanced image into multiresolution image. The texture features from grey level co‐occurrence matrix (GLCM), Gabor, and discrete wavelet transform (DWT) are extracted with the approximate subband of the NSCT transformed image. These extracted features are trained and classified into either normal or glioblastoma brain image using feed forward back propagation neural networks. Further, K‐means clustering algorithm is used to segment the tumor region in classified glioblastoma brain image. The proposed method achieves 89.7% of sensitivity, 99.9% of specificity, and 99.8% of accuracy.     

Computer aided automated detection and classification of brain tumors using CANFIS classification method

The development of abnormal cells in human brain leads to the formation of tumors. This article proposes an efficient approach for brain tumor detection and segmentation using image fusion and co-active adaptive neuro fuzzy inference system (CANFIS) classification method. The brain MRI images are fused and the dual tree complex wavelet transform is applied on the fused image. Then, the statistical features, local ternary pattern features and gray level co-occurrence matrix features. These extracted features are classified using CANFIS classification approach for the classification of source brain MRI image into either normal or abnormal. Further, morphological operations are applied on the abnormal brain MRI image for segmenting the tumor regions. The proposed methodology is evaluated with respect to the performance metrics sensitivity, specificity, positive predictive value, negative predictive value, tumor segmentation accuracy with detection rate. The proposed image fusion based brain tumor detection and classification methodology stated in this article achieves 96.5% of average sensitivity, 97.7% of average specificity, 87.6% of positive predictive value, 96.6% of negative predictive value, and 98.8% of average accuracy.     

Glioma brain tumor detection and segmentation using weighting random forest classifier with optimized ant colony features

The uncontrolled growth of cells in brain regions leads to the tumor regions and these abnormal tumor regions are scanned by magnetic resonance imaging (MRI) technique as an image. This paper proposes random forest classifier based Glioma brain tumor detection and segmentation methodology using feature optimization technique. The texture features are derived from brain MRI image and these derived feature set are now optimized by ant colony optimization algorithm. These optimized set of features are trained and classified using random forest classification method. This classifier classifies the brain MRI image into Glioma or non-Glioma image based on the optimized set of features. Furthermore, energy-based segmentation method is applied on the classified Glioma image for segmenting the tumor regions. The proposed methodology for Glioma brain tumor stated in this paper achieves 97.7% of sensitivity, 96.5% of specificity, and 98.01% of accuracy.     

An efficient approach for brain image (tissue) compression based on the position of the brain tumor

Medical image processing plays an important role in brain tissue detection and segmentation. In this paper, a computer aided detection of brain tissue compression based on the estimation of the location of the brain tumor. The proposed system detects and segments the brain tissues and brain tumor using mathematical morphological operations. Further, the brain tissue with tumor is compressed using lossless compression technique and the brain tissue without tumor is compressed using lossy compression technique. The proposed method achieves 96.46% sensitivity, 99.20% specificity and 98.73% accuracy for the segmentation of white matter regions from the brain. The proposed method achieves 98.16% sensitivity, 99.36% specificity and 98.78% accuracy for the segmentation of cerebrospinal fluid (CSF) regions from the brain and also achieves 93.07% sensitivity, 98.79% specificity and 97.63% accuracy for the segmentation of grey matter regions from the brain. This paper focus the brain tissue compression based on the location of brain tumor. The grey matter of the brain is applied to lossless compression due to the presence of the tumor in grey matter of the brain. The proposed system achieves 29.23% of compression ratio for compressing the grey matter of the brain region. The white matter and CSF regions of the brain are applied to lossy compression due to the non‐presence of the tumor. The proposed system achieves 39.13% of compression ratio for compressing the white matter and also achieves 37.5% of compression ratio for compressing the CSF tissue. © 2016 Wiley Periodicals, Inc. Int J Imaging Syst Technol, 26, 237–242, 2016     

CANFIS based glioma brain tumor classification and retrieval system for tumor diagnosis

Brain tumor classification and retrieval system plays an important role in medical field. In this paper, an efficient Glioma Brain Tumor detection and its retrieval system is proposed. The proposed methodology consists of two modules as classification and retrieval. The classification modules are designed using preprocessing, feature extraction and tumor detection techniques using Co‐Active Adaptive Neuro Fuzzy Inference System (CANFIS) classifier. The image enhancement can be achieved using Heuristic histogram equalization technique as preprocessing and further texture features as Local Ternary Pattern (LTP) features and Grey Level Co‐occurrence Matrix (GLCM) features are extracted from the enhanced image. These features are used to classify the brain image into normal and abnormal using CANFIS classifier. The tumor region in abnormal brain image is segmented using normalized graph cut segmentation algorithm. The retrieval module is used to retrieve the similar segmented tumor regions from the dataset for diagnosing the tumor region using Euclidean algorithm. The proposed Glioma Brain tumor classification methodology achieves 97.28% sensitivity, 98.16% specificity and 99.14% accuracy. The proposed retrieval system achieves 97.29% precision and 98.16% recall rate with respect to ground truth images.     

A novel prognosis and segmentation of necrosis (dead cells) in contrast enhanced T1-weighted glioblastoma tumor with automatic contextual clustering

In recent years, mortality rate with high-grade tumor has been increased significantly especially with glioblastoma (GBM) brain tumor while compared to other malignant brain tumor. Here, the amount of dead cells accommodated with the tumor tissue in GBM brain tumor play a vital task and necessitate an earlier diagnosis of malignancy with the GBM tumor. It inspires to implement new automatic diagnosis system which detects the dead cells and tumor tissue with the GBM brain tumor, such that the survival rate of the diseased can easily be prognosis by the Radiologist and Neurosurgeon. The main objective of this article is to detect the amount of dead cells with respect to tumor tissue associated with the GBM brain tumor which desires the impact factor of the brain tumor. In this framework, initially, the new contrast enhancement modality is incorporated to enhance the gray information over the dead cells and the tumor tissue with the T1-weighted MRI GBM brain tumor. In this enhancement, the edges of the tumor cells and its dead cells are magnified efficiently. As the noises and outliers with MR image is unpredictable and it experiences the variable amount of noises over the local window, the contextual information over each pixel of the image is adaptively modified with respect to the amount of noise over local window using adaptive contextual clustering. The performance evaluation of the framework is investigated which exhibits the overwhelming result compared to conventional detection techniques.     

Segmentation of glioma tumors using convolutional neural networks

The abnormal development of cells in brain leads to the formation of tumors in brain. In this article, image fusion based brain tumor detection and segmentation methodology is proposed using convolutional neural networks (CNN). This proposed methodology consists of image fusion, feature extraction, classification, and segmentation. Discrete wavelet transform (DWT) is used for image fusion and enhanced brain image is obtained by fusing the coefficients of the DWT transform. Further, Grey Level Co‐occurrence Matrix features are extracted and fed to the CNN classifier for glioma image classifications. Then, morphological operations with closing and opening functions are used to segment the tumor region in classified glioma brain image.     

EEG/MEG source imaging in the absence of subject's brain MRI scan: Perspective on co-registration and MRI selection approach

EEG/MEG source localization requires a subject's brain MRI to compute the sourcemodel and headmodel . As part of this computation, co-registration of the digitized head information and brain MRI scan is the essential step. However, in the absence of a brain MRI scan, an approximated sourcemodel and headmodel can be computed from the subject's digitized head information and brain MRI scans from other subjects. In the present work, we compared the fiducial (FID)- and iterative closet point (ICP)-based co-registration approaches for computing an approximated sourcemodel using single and multiple available brain MRI scans. We also evaluated the two different template MRI selection strategies: one is based on objective registration error, and another on sourcemodel approximation error. The outcome suggests that averaged approximated solutions using multiple template brain MRI scans showed better performance than single-template MRI-based solutions. The FID-based approach performed better than the ICP-based approach for co-registration of the digitized head surface and brain MRI scan. While selecting template MRIs, the selection approach based on objective registration error showed better performance than a sourcemodel approximation error-based criterion. Cross-dataset performance analysis showed a higher model approximation error than within-dataset analysis. In conclusion, the FID-based co-registration approach and objective registration error-based MRI selection criteria provide a simple, fast and more accurate solution to compute averaged approximated models compared with the ICP-based approach. The demography of brain MRI scans should be similar to that of the query subject whose brain MRI scan was unavailable.     

Edge detection using Chebyshev's orthogonal polynomial and brain extraction from magnetic resonance images of human head

In this article, we propose a new edge detecting method based on the transform coefficients obtained by a point spread function constructed out of Chebyshev's orthogonal polynomials. This edge detector finds edges similar to that of Prewitt and Roberts but is robust against additive and multiplicative noises. We also propose a new scheme to extract brain portion from the magnetic resonance images (MRI) of human head scan by making use of the of the new edge detector. The proposed scheme involves edge detection, morphological operations, and largest connected component analysis. Experiments conducted by applying the proposed scheme on 19 volumes of MRI collected from Internet Brain Segmentation Repository (IBSR) show that the proposed brain extraction scheme performed better than the popular Brain Extraction Tool (BET). The performance of the proposed scheme is measured by computing the Dice coefficient (D) and Jaccard similarity index (J). The proposed method produced a value of 0.9068 for D and 0.8321 for J.