Carbon nanotube DNA sensor and sensing mechanism

We report the fabrication of single-walled carbon nanotube (SWNT) DNA sensors and the sensing mechanism. The simple and generic protocol for label-free detection of DNA hybridization is demonstrated with random sequence 15mer and 30mer oligonucleotides. DNA hybridization on gold electrodes, instead of on SWNT sidewalls, is mainly responsible for the acute electrical conductance change due to the modulation of energy level alignment between SWNT and gold contact. This work provides concrete experimental evidence on the effect of SWNT-DNA binding on DNA functionality, which will help to pave the way for future designing of SWNT biocomplexes for applications in biotechnology in general and also DNA-assisted nanotube manipulation techniques.     

Detection of DNA hybridization using the near-infrared band-gap fluorescence of single-walled carbon nanotubes

We demonstrate the optical detection of DNA hybridization on the surface of solution suspended single-walled carbon nanotubes (SWNTs) through a SWNT band gap fluorescence modulation. Hybridization of a 24-mer oligonucleotide sequence with its complement produces a hypsochromic shift of 2 meV, with a detection sensitivity of 6 nM. The energy shift is modeled by correlating the surface coverage of DNA on SWNT to the exciton binding energy, yielding an estimated initial fractional coverage of 0.25 and a final coverage of 0.5. Hybridization on the nanotube surface is confirmed using Forster resonance energy transfer of fluorophore-labeled DNA oligonucleotides. This detection is enabled through a new technique to suspend SWNTs using adsorption of single-stranded DNA and subsequent removal of free DNA from solution. While the kinetics of free DNA hybridization are relatively fast (<10 min), the kinetics of the process on SWNTs are slower under comparable conditions, reaching steady state after 13 h at 25 degrees C. A second-order kinetic model yields a rate constant of k = 4.33 x 10(5) (M h)(-1). This optical, selective detection of specific DNA sequences may have applications in the life sciences and medicine as in vitro or in vivo detectors of oligonucleotides.     

Ultrasonication study for suspending single-walled carbon nanotubes in water

A systematic calorimetry-based technique was developed to standardize single-walled carbon nanotube (SWNT) dispersion protocol. Simple calorimetric experiments were performed to benchmark the performance of the ultra-dismembrator. Temperature profiles for the sonication period were utilized to estimate energy input to the system. Energy loss profile was generated for the ultradismembrator in use and a calibration relationship was formulated that could standardize the sonication process. The standardized protocol was used to prepare aqueous SWNT suspensions-sonicating SWNTs in a varied range of input energy (18-100 kJ) in water. SWNT mass fractions suspended for each energy input was accurately measured and the suspended SWNT samples were characterized for morphology, surface potential, cluster size and structure, and chemical functionality using high resolution transmission electron microscopy (HRTEM), electrophoresis, dynamic and static light scattering (DLS/SLS), and Raman spectroscopy. The study demonstrated that suspended mass of SWNTs increased up to 18 kJ of energy input with no further increase upon continued energy input. The physicochemical properties showed similar trend for energy input. The aggregate cluster size, surface potential behavior, as well as the Raman defect properties plateaued after the initial energy input. The significant changes observed were limited to morphological properties, i.e., shorter length, debundled, and sharp edged SWNTs and fractal cluster formation (lower D(f)) with increased input energy.     

Fractionation of SWNT/nucleic acid complexes by agarose gel electrophoresis

We show that aqueous dispersions of single-walled carbon nanotubes (SWNTs), prepared with the aid of nucleic acids (NAs) such as RNA or DNA, can be separated into fractions using agarose gel electrophoresis. In a DC electric field, SWNT/NA complexes migrate in the gel in the direction of positive potential to form well-defined bands. Raman spectroscopy as a function of band position shows that nanotubes having different spectroscopic properties possess different electrophoretic mobilities. The migration patterns for SWNT/RNA and SWNT/DNA complexes differ. Parallel elution of the SWNT/NA complexes from the gel during electrophoresis and subsequent characterization by AFM reveals differences in nanotube diameter, length and curvature. The results suggest that fractionation of nanotubes can be achieved by this procedure. We discuss factors affecting the mobility of the nanotube complexes and propose analytical applications of this technique.     

ZnS nanocrystals decorated single-walled carbon nanotube based chemiresistive label-free DNA sensor

We fabricated ZnS nanocrystals decorated single-walled carbon nanotube (SWNT) based chemiresistive sensor for DNA. Since the charge transfer in the hybrid nanostructures is considered to be responsible for many of their unique properties, the role of ZnS nanocrystals toward its performance in DNA sensor was delineated. It was found that the free carboxyl groups surrounding the ZnS nanocrystals allowed large loading of single strand DNA (ssDNA) probe that provided an ease of hybridization with target complementary c-ssDNA resulting in large electron transfer to SWNT. Thus it provided a significant improvement in sensitivity toward c-ssDNA as compared to bare SWNT based DNA sensor.     

Processing and performance improvements of SWNT paper reinforced PEEK nanocomposites

In this letter, the sandwich-like single-walled carbon nanotube (SWNT) paper/polyetheretherketone (PEEK) composites were successfully prepared by using a hot-compress method. Based on SEM observation, it was found that the PEEK macromolecules could diffuse into the voids of SWNT paper and were able to form very good bonding to the nanotube bundles, which ensure effective stress transfer between two phases. Some typical problems in preparing conventional carbon nanotube/polymer composites, e.g. the difficulty to obtain well-dispersed high-loading nanotubes into polymer matrices, were successfully overcome. Moreover, the compact networks of SWNTs were not destroyed at the appropriate processing condition. Correspondingly, the resulting composite (with one layer of SWNT paper) exhibited about 40% increased in Young’s modulus and 4% enhanced in failure strength when comparing with that of neat PEEK, respectively. According to rule-of-mixtures of the special sandwich-like structure, the estimated Young’s modulus can reach up to about 8 GPa, which was nearly three times of that of neat matrix. Moreover, the surface electric conductivity and thermal conductivity of the PEEK films were also increased after the addition of SWNT paper. The preliminary results suggest that the SWNT paper has great potential for being used to reinforce polymers.     

DNA-linker-induced surface assembly of ultra dense parallel single walled carbon nanotube arrays

Ultrathin film preparations of single-walled carbon nanotube (SWNT) allow economical utilization of nanotube properties in electronics applications. Recent advances have enabled production of micrometer scale SWNT transistors and sensors but scaling these devices down to the nanoscale, and improving the coupling of SWNTs to other nanoscale components, may require techniques that can generate a greater degree of nanoscale geometric order than has thus far been achieved. Here, we introduce linker-induced surface assembly, a new technique that uses small structured DNA linkers to assemble solution dispersed nanotubes into parallel arrays on charged surfaces. Parts of our linkers act as spacers to precisely control the internanotube separation distance down to <3 nm and can serve as scaffolds to position components such as proteins between adjacent parallel nanotubes. The resulting arrays can then be stamped onto other substrates. Our results demonstrate a new paradigm for the self-assembly of anisotropic colloidal nanomaterials into ordered structures and provide a potentially simple, low cost, and scalable route for preparation of exquisitely structured parallel SWNT films with applications in high-performance nanoscale switches, sensors, and meta-materials.     

Label-free detection of DNA hybridization using pyrene-functionalized single-walled carbon nanotubes: effect of chemical structures of pyrene molecules on DNA sensing performance

We investigate the effect of functional groups of pyrene molecules on the electrical sensing performance of single-walled carbon nanotubes (SWNTs) based DNA biosensor, in which pyrenes with three different functional groups of carboxylic acid (Py-COOH), aldehyde (Py-CHO) and amine (Py-NH2) are used as linker molecules to immobilize DNA on the SWNT films. UV/Visible absorption spectra results show that all of the pyrene molecules are successfully immobilized on the SWNT surface via pi-pi stacking interaction. Based on fluorescence analysis, we show that the amide bonding of amine terminated DNA via pyrene containing carboxylic groups is the most efficient to immobilize DNA on the nanotube film. The electrical detection results show that the conductance of Py-COOH modified SWNT film is increased upon DNA immobilization, followed by further increase after hybridization of target DNAs. It indicates that the pyrene molecules with carboxylic acid groups play an important role to achieve highly efficient label-free detection by nondestructive and specific immobilization of DNAs.     

Adhesion, friction and wear on the nanoscale of MWNT tips and SWNT and MWNT arrays

The nanotribological characterization of carbon nanotubes is fundamental for the exploration of new sliding applications. In this study, a comprehensive investigation of adhesion, friction and wear of a multiwalled nanotube (MWNT) tip, and SWNT (single-walled nanotube) and MWNT arrays has been carried out. A nonlinear response of the MWNT tip is observed when the tip is brought into and out of contact with various surfaces. A nonlinear response occurs due to the buckling of the nanotube and its subsequent sliding on the surface. In addition to the role of surface chemistry, it can also explain the relatively high value of the coefficient of friction obtained on different surfaces, as compared to that of Si and Si(3)N(4) tips. The adhesion and friction studies carried out on SWNT and MWNT arrays using Si tips show that SWNT arrays, compared to MWNT arrays, exhibit lower values, possibly due to lower van der Waals forces as a result of lower packing density and higher flexibility. The wear tests conducted with the MWNT tip and a Si tip on a gold film, at two normal loads, show less damage of the surface when the MWNT tip is used because of the MWNT acting as a compliant spring, absorbing part of the load. Wear tests conducted with a Si tip on SWNT and MWNT arrays show that the arrays do not wear. The tip wear and the friction force in the SWNT array are lower, because of lower adhesion and higher flexibility of the SWNTs, which causes less opposition to the motion of the tip.     

Influence of surface chemistry on inkjet printed carbon nanotube films

Carbon nanotube ink chemistry and the proper formulation are crucial for direct-write printing of nanotubes. Moreover, the correct surface chemistry of the self-assembled monolayers that assist the direct deposition of carbon nanotubes onto the substrate is equally important to preserve orientation of the printed carbon nanotubes. We report that the successful formulation of two single walled carbon nanotube (SWNT) inks yields a consistent, homogenous printing pattern possessing the requisite viscosities needed for flow through the microcapillary nozzles of the inkjet printer with fairly modest drying times. The addition of an aqueous sodium silicate allows for a reliable method for forming a uniform carbon nanotube network deposited directly onto unfunctionalized surfaces such as glass or quartz via inkjet deposition. Furthermore, this sodium silicate ingredient helps preserve applied orientation to the printed SWNT solution. Sheet resistivity of this carbon nanotube ink formula printed on quartz decreases as a function of passes and is independent of the substrate. SWNTs were successfully patterned on Au. This amine-based surface chemistry dramatically helps improve the isolation stabilization of the printed SWNTs as seen in the atomic force microscopy (AFM) image. Lastly, using our optimized SWNT ink formula and waveform parameters in the Fuji materials printer, we are able to directly write/print SWNTs into 2D patterns. Dried ink pattern expose and help orient roped carbon nanotubes that are suspended in ordered arrays across the cracks.     

Optical anisotropy in single-walled carbon nanotube thin films: implications for transparent and conducting electrodes in organic photovoltaics

Optical anisotropy in single-walled carbon nanotube thin film networks is reported. We obtain the real and imaginary parts of the in-(parallel) and out-of-plane (perpendicular) complex dielectric functions of the single-walled carbon nanotube (SWNT) thin films by combining transmission measurements at several incidence angles with spectroscopic ellipsometry data on different substrates. In sparse networks, the two components of the real part of the complex dielectric constant (epsilon1 parallel and epsilon1 perpendicular) were found to differ by 1.5 at 2.25 eV photon energy. The resulting angular dependence (from 0 to 70 degrees incidence angles) of transmittance is reflected in the conversion efficiency of organic solar cells utilizing SWNT thin films as the hole conducting electrodes. Our results indicate that, in addition to the transparency and sheet resistance, factors such as the optical anisotropy must be considered for optical devices incorporating SWNT networks.     

Single-walled carbon nanotube diameter

Two different single-walled carbon nanotube (SWNT) growth modes (cap growth mode and circumference growth mode) are shown to exist. General SWNT diameter windows are derivable from catalyst particle size considerations. In addition, an almost complete picture of nanotube diameter dependencies for the cap growth mode is drawn from experiment. The nanotube diameter always scales linear with temperature, but the degree of dependence varies with the catalyst element. The nanotube diameter scales logarithmically with the gas pressure and catalyst composition. Very few or exactly one atom of a catalyst additive is sufficient to induce SWNT diameter changes. The experimental data allow the conclusion that the observed nanotube diameter is based on materials properties of sp2-bonded carbon/graphene sheets, on individual properties of the catalyst elements, and on additional kinetic components from temperature and pressure changes. Indications are found for a specific and maybe decisive role of adsorbate atoms at the surface of a catalyst particle on the nanotube diameter and therefore on the process of nanotube nucleation and growth.     

Growth and characterization of GaAs nanowires on carbon nanotube composite films: toward flexible nanodevices

Poly(ethylene imine) functionalized carbon nanotube thin films, prepared using the vacuum filtration method, were decorated with Au nanoparticles by in situ reduction of HAuCl4 under mild conditions. These Au nanoparticles were subsequently employed for the growth of GaAs nanowires (NWs) by the vapor-liquid-solid process in a gas source molecular beam epitaxy system. The process resulted in the dense growth of GaAs NWs across the entire surface of the single-walled nanotube (SWNT) films. The NWs, which were orientated in a variety of angles with respect to the SWNT films, ranged in diameter between 20 to 200 nm, with heights up to 2.5 microm. Transmission electron microscopy analysis of the NW-SWNT interface indicated that NW growth was initiated upon the surface of the nanotube composite films. Photoluminescence characterization of a single NW specimen showed high optical quality. Rectifying asymmetric current-voltage behavior was observed from contacted NW ensembles and attributed to the core-shell pn-junction within the NWs. Potential applications of such novel hybrid architectures include flexible solar cells, displays, and sensors.     

Detection of a nerve agent simulant using single-walled carbon nanotube networks: dimethyl-methyl-phosphonate

Single-walled carbon nanotube (SWNT) networks were used to detect hazardous dimethyl-methyl-phosphonate (DMMP) gas in real time, employing two different metals as electrodes. Random networks of SWNTs were simply obtained by drop-casting a SWNT-containing solution onto a surface-oxidized Si substrate. Although the electrical responses to DMMP at room temperature were reversible for both metals, the Pd-contacting SWNT network sensors exhibited a higher response and a shorter response time than those of the Au-contacting SWNT network sensors at the same DMMP concentration, due to the stronger interactions between the SWNTs and Pd surface atoms. In Pd-contacting SWNT network sensors, the response increased linearly with increasing DMMP concentration and reproducible response curves were obtained for DMMP levels as low as 1 ppm. These results indicate that SWNT networks in contact with Pd electrodes can function as good DMMP sensors at room temperature with scalable and fast response and excellent recovery.     

Density functional theory and tight binding-based dynamical studies of carbon metal systems of relevance to carbon nanotube growth

Density functional theory (DFT) and tight binding (TB) models have been used to study systems containing single-walled carbon nanotubes (SWNTs) and metal clusters that are of relevance to SWNT growth and regrowth. In particular, TB-based Monte Carlo (TBMC) simulations at 1000 or 1500 K show that Ni atoms that are initially on the surface of the SWNT or that are clustered near the SWNT end diffuse to the nanotube end so that virtually none of the Ni atoms are located inside the nanotube. This occurs, in part, due to the lowering of the Ni atom energies when they retract from the SWNT to the interior of the cluster. Aggregation of the atoms at the SWNT end does not change the chirality within the simulation time, which supports the application of SWNT regrowth (seeded growth) as a potential route for chirality-controlled SWNT production. DFT-based geometry optimisation and direct dynamics at 2000 K show that Cr and Mo atoms in Cr₅Co₅₀ and Mo₅Co₅₀ clusters prefer to be distributed in the interior of the clusters. Extension of these calculations should deepen our understanding of the role of the various alloy components in SWNT growth.      

Microwave‐Assisted Regeneration of Single‐Walled Carbon Nanotubes from Carbon Fragments

Direct growth of chirality‐controlled single‐walled carbon nanotubes (SWNTs) with metal catalyst free strategy, like cloning or epitaxial growth, has suffered from the low efficiency. The underlying problem is the activation of seed edge. Here an unexpectedly efficient microwave‐assisted pathway to regenerate SWNTs from carbon fragments on SiO₂/Si substrate is demonstrated via Raman spectroscopy and atomic force microscope (AFM) characterization. In this attempt, microwave irradiation provides fast heating to remove polar groups bonded to carbon nanotubes and reduce the spontaneous closure of tubes’ open ends. The survived SWNT and carbon fragments connected to it after plasma treatment are simply microwaved and then they serve as the template for regeneration. Scanning electron microscope and AFM characterizations indicate that the efficiency of the regeneration can reach 100%. And the regenerated SWNT has been proved without any change in chirality compared to the original SWNT. Electrical measurements on regenerated carbon nanotube films indicate 1 and 2 times increase in on/off ratio and on‐state current respectively than original carbon nanotube films obtained from solution‐phase separation, confirming the improvement of SWNT's quality. The microwave‐assisted regeneration is found to be highly effective and would be applied to improve the cloning efficiency of carbon nanotubes potentially.     

Charge-transfer interaction in single-walled carbon nanotubes with tetrathiafulvalene and their applications

We observed that single-walled carbon nanotube (SWNT) was aligned in the presence of TTF This alignment was induced by a specific interaction between SWNT and tetrathiafulvalene (TTF), a well-known organic donor. The interaction between the two molecules can be explained by a charge-transfer, which was confirmed by X-ray photoelectron spectroscopy (XPS) and Raman spectroscopy. The binding energies of S (2P1/2) and S (2P3/2) were shifted from 163.0 eV and 164.1 eV to 163.9 eV and 165.1 eV, respectively. In Raman spectra of the SWNT-TTF, three peaks of SWNT in radial breathing mode were also upshifted by 4-5 cm(-1). The charge-transfer interaction also contributed in modifying the electronic structure of SWNT and furthermore enhanced the electrical conductivity of SWNT. A more conductive thin film was fabricated using the SWNT-TTF Four-probe measurement revealed that the surface resistance of the SWNT-TTF film was reduced to 4.359 omega at room temperature while that of SWNT film was 6.894 omega. These results enable carbon nanotubes to be utilized more for practically for industrial applications in fabricating peculiar nano-sized building blocks.     

Hydrothermally Oxidized Single‐Walled Carbon Nanotube Networks for High Volumetric Electrochemical Energy Storage

Improving volumetric energy density is one of the major challenges in nanostructured carbon electrodes for electrochemical energy storage device applications. Herein, a simple hydrothermal oxidation process of single‐walled carbon nanotube (SWNT) networks in dilute nitric acid is reported, enabling simultaneous physical densification and chemical functionalization of the as‐assembled randomly‐packed SWNT films. After the hydrothermal oxidation process, the density of the SWNT films increases from 0.63 to 1.02 g cm^?3 and a considerable amount of redox‐active oxygen functional groups are introduced on the surface of the SWNTs. The functionalized SWNT films are used as positive electrodes against Li metal negative electrodes for potential Li‐ion capacitors or Li‐ion battery applications. The functionalized SWNT electrodes deliver high volumetric as well as gravimetric capacities, 154 Ah L^?1 and 152 mAh g^?1, respectively, owing to the surface redox reactions between the introduced oxygen functional groups and Li ions. In addition, these electrodes exhibit a remarkable rate‐capability by retaining its high capacity of 94 Ah L^?1 (92 mAh g^?1) at a high discharge rate of 10 A g^?1. These results demonstrate the simple hydrothermal oxidation process as an attractive strategy for improving the volumetric performance of nanostructured carbon electrodes.     

Diameter and Density Control of Single‐Walled Carbon Nanotube Forests by Modulating Ostwald Ripening through Decoupling the Catalyst Formation and Growth Processes

A continuous and wide range control of the diameter (1.9?3.2 nm) and density (0.03?0.11 g cm^?3) of single‐walled carbon nanotube (SWNT) forests is demonstrated by decoupling the catalyst formation and SWNT growth processes. Specifically, by managing the catalyst formation temperature and H₂ exposure, the redistribution of the Fe catalyst thin film into nanoparticles is controlled while a fixed growth condition preserved the growth yield. The diameter and density are inversely correlated, where low/high density forests would consist of large/small diameter SWNTs, which is proposed as a general rule for the structural control of SWNT forests. The catalyst formation process is modeled by considering the competing processes, Ostwald ripening, and subsurface diffusion, where the dominant mechanism is found to be Ostwald ripening. Specifically, H₂ exposure increases catalyst surface energy and decreases diameter, while increased temperature leads to increased diffusion on the surface and an increase in diameter.     

Nanoscale Charge Percolation Analysis in Polymer‐Sorted (7,5) Single‐Walled Carbon Nanotube Networks

The current percolation in polymer‐sorted semiconducting (7,5) single‐walled carbon nanotube (SWNT) networks, processed from solution, is investigated using a combination of electrical field‐effect measurements, atomic force microscopy (AFM), and conductive AFM (C‐AFM) techniques. From AFM measurements, the nanotube length in the as‐processed (7,5) SWNTs network is found to range from ≈100 to ≈1500 nm, with a SWNT surface density well above the percolation threshold and a maximum surface coverage ≈58%. Analysis of the field‐effect charge transport measurements in the SWNT network using a 2D homogeneous random‐network stick‐percolation model yields an exponent coefficient for the transistors OFF currents of 16.3. This value is indicative of an almost ideal random network containing only a small concentration of metallic SWNTs. Complementary C‐AFM measurements on the other hand enable visualization of current percolation pathways in the xy plane and reveal the isotropic nature of the as‐spun (7,5) SWNT networks. This work demonstrates the tremendous potential of combining advanced scanning probe techniques with field‐effect charge transport measurements for quantification of key network parameters including current percolation, metallic nanotubes content, surface coverage, and degree of SWNT alignment. Most importantly, the proposed approach is general and applicable to other nanoscale networks, including metallic nanowires as well as hybrid nanocomposites.