Faster two-dimensional pattern matching with rotations

The most efficient currently known algorithms for two-dimensional pattern matching with rotations have a worst case time complexity of O(n²m³)$\mathrm{O}(n^2{m}^3)$, where the size of the text is n×n$n\times n$ and the size of the pattern is m×m$m\times m$. In this paper we present a new algorithm for the problem whose running time is O(n²m²)$\mathrm{O}(n^2{m}^2)$.     

Swapping a failing edge of a shortest paths tree by minimizing the average stretch factor

We consider a two-edge connected, undirected graph G=(V,E)$G=(V,E)$, with n$n$ nodes and m$m$ non-negatively real weighted edges, and a single source shortest paths tree (SPT) T$T$ of G$G$ rooted at an arbitrary node r$r$. If an edge in T$T$ is temporarily removed, it makes sense to reconnect the nodes disconnected from the root by adding a single non-tree edge, called a swap edge  , instead of rebuilding a new optimal SPT from scratch. In the past, several optimality criteria have been considered to select a best possible swap edge. In this paper we focus on the most prominent one, that is the minimization of the average distance between the root and the disconnected nodes. To this respect, we present an O(mlog²n)$O\left(m{log}^{2}n\right)$ time and O(m)$O\left(m\right)$ space algorithm to find a best swap edge for every edge of T$T$, thus improving for m=o(n²/log²n)$m=o(n^2/{log}^{2}n)$ the previously known O(n²)$O\left(n^2\right)$ time and space complexity algorithm.     

Divergence bounded computable real numbers

A real x$x$ is called h$h$-bounded computable  , for some function h:N→N$h:\mathbb{N}\to \mathbb{N}$, if there is a computable sequence (_xs)$(x_s)$ of rational numbers which converges to x$x$ such that, for any n∈N$n\in \mathbb{N}$, at most h(n)$h(n)$ non-overlapping pairs of its members are separated by a distance larger than 2^-n$2^{-n}$. In this paper we discuss properties of h$h$-bounded computable reals for various functions h$h$. We will show a simple sufficient condition for a class of functions h$h$ such that the corresponding h$h$-bounded computable reals form an algebraic field. A hierarchy theorem for h$h$-bounded computable reals is also shown. Besides we compare semi-computability and weak computability with the h$h$-bounded computability for special functions h$h$.     

An efficient construction of one-to-many node-disjoint paths in folded hypercubes

A folded hypercube is basically a hypercube with additional links augmented, where the additional links connect all pairs of nodes with longest distance in the hypercube. In an n$n$-dimensional folded hypercube, it has been shown that n+1$n+1$ node-disjoint paths from one source node to other n+1$n+1$ (mutually) distinct destination nodes, respectively, can be constructed in O(n⁴)$O\left(n^4\right)$ time so that their maximal length is not greater than ⌈n/2⌉+1$\lceil n/2\rceil +1$, where n+1$n+1$ is the connectivity and ⌈n/2⌉$\lceil n/2\rceil$ is the diameter. Besides, their maximal length is minimized in the worst case. In this paper, we further show that by minimizing the computations of minimal routing functions, these node-disjoint paths can be constructed in O(n³)$O\left(n^3\right)$ time, which is more efficient, and is hard to be reduced because it must take O(n³)$O\left(n^3\right)$ time to compute a minimal routing function by solving a corresponding maximum weighted bipartite matching problem with the best known algorithm.     

Spanners for bounded tree-length graphs

This paper concerns construction of additive stretched spanners with few edges for n$n$-vertex graphs having a tree-decomposition into bags of diameter at most δ$\delta$, i.e., the tree-length δ$\delta$ graphs. For such graphs we construct additive 2δ$2\delta$-spanners with O(δn+nlogn)$O(\delta n+nlogn)$ edges, and additive 4δ$4\delta$-spanners with O(δn)$O\left(\delta n\right)$ edges. This provides new upper bounds for chordal graphs for which δ=1$\delta =1$. We also show a lower bound, and prove that there are graphs of tree-length δ$\delta$ for which every multiplicative δ$\delta$-spanner (and thus every additive (δ−1)$(\delta -1)$-spanner) requires Ω(n^1+1/Θ(δ))$\Omega \left(n^{1+1/\Theta \left(\delta \right)}\right)$ edges.     

Efficient pebbling for list traversal synopses with application to program rollback

We show how to support efficient back traversal in a unidirectional list, using small memory and with essentially no slowdown in forward steps. Using O(lgn)$O(lgn)$ memory for a list of size n$n$, the i$i$’th back-step from the farthest point reached so far takes O(lgi)$O(lgi)$ time in the worst case, while the overhead per forward step is at most ?$?$ for arbitrary small constant ?>0$?>0$. An arbitrary sequence of forward and back steps is allowed. A full trade-off between memory usage and time per back-step is presented: k$k$ vs. kn^1/k$k{n}^{1/k}$ and vice versa. Our algorithms are based on a novel pebbling technique which moves pebbles on a virtual binary, or n^1/k$n^{1/k}$-ary, tree that can only be traversed in a pre-order fashion.     

Fast algorithms for some dominating induced matching problems

We describe O(n)$O(n)$ time algorithms for finding the minimum weighted dominating induced matching of chordal, dually chordal, biconvex, and claw-free graphs. For the first three classes, we prove tight O(n)$O(n)$ bounds on the maximum number of edges that a graph having a dominating induced matching may contain. By applying these bounds, and employing existing O(n+m)$O(n+m)$ time algorithms we show that they can be reduced to O(n)$O(n)$ time. For claw-free graphs, we describe a variation of the existing algorithm for solving the unweighted version of the problem, which decreases its complexity from O(n²)$O(n^2)$ to O(n)$O(n)$, while additionally solving the weighted version. The same algorithm can be easily modified to count the number of DIM's of the given graph.     

Minimum leaf out-branching and related problems

Given a digraph D$D$, the Minimum Leaf Out-Branching problem (MinLOB) is the problem of finding in D$D$ an out-branching with the minimum possible number of leaves, i.e., vertices of out-degree 0. We prove that MinLOB is polynomial-time solvable for acyclic digraphs. In general, MinLOB is NP-hard and we consider three parameterizations of MinLOB. We prove that two of them are NP-complete for every value of the parameter, but the third one is fixed-parameter tractable (FPT). The FPT parameterization is as follows: given a digraph D$D$ of order n$n$ and a positive integral parameter k$k$, check whether D$D$ contains an out-branching with at most n−k$n-k$ leaves (and find such an out-branching if it exists). We find a problem kernel of order O(k²)$O\left(k^2\right)$ and construct an algorithm of running time O(2^O(klogk)+n⁶)$O(2^{O(klogk)}+n^6)$, which is an ‘additive’ FPT algorithm. We also consider transformations from two related problems, the minimum path covering and the maximum internal out-tree problems into MinLOB, which imply that some parameterizations of the two problems are FPT as well.     

Paths and trails in edge-colored graphs

This paper deals with the existence and search for properly edge-colored paths/trails between two, not necessarily distinct, vertices s$s$ and t$t$ in an edge-colored graph from an algorithmic perspective. First we show that several versions of the s−t$s-t$ path/trail problem have polynomial solutions including the shortest path/trail case. We give polynomial algorithms for finding a longest properly edge-colored path/trail between s$s$ and t$t$ for a particular class of graphs and characterize edge-colored graphs without properly edge-colored closed trails. Next, we prove that deciding whether there exist k$k$ pairwise vertex/edge disjoint properly edge-colored s−t$s-t$ paths/trails in a c$c$-edge-colored graph G^c$G^c$ is NP-complete even for k=2$k=2$ and c=Ω(n²)$c=\Omega \left(n^2\right)$, where n$n$ denotes the number of vertices in G^c$G^c$. Moreover, we prove that these problems remain NP-complete for c$c$-edge-colored graphs containing no properly edge-colored cycles and c=Ω(n)$c=\Omega \left(n\right)$. We obtain some approximation results for those maximization problems together with polynomial results for some particular classes of edge-colored graphs.     

Compatibility of unrooted phylogenetic trees is FPT

A collection of _T1,_T2,…,_Tk$T_1,T_2,\dots ,T_k$ of unrooted, leaf labelled (phylogenetic) trees, all with different leaf sets, is said to be compatible   if there exists a tree T$T$ such that each tree _Ti$T_i$ can be obtained from T$T$ by deleting leaves and contracting edges. Determining compatibility is NP-hard, and the fastest algorithm to date has worst case complexity of around Ω(n^k)$\mathrm{\Omega }(n^k)$ time, n$n$ being the number of leaves. Here, we present an O(nf(k))$\mathrm{O}(\mathit{nf}(k))$ algorithm, proving that compatibility of unrooted phylogenetic trees is fixed parameter tractable   (FPT) with respect to the number k$k$ of trees.     

Choosing starting values for certain Newton–Raphson iterations

We aim at finding the best possible seed values when computing a^1/p$a^{1/p}$ using the Newton–Raphson iteration in a given interval. A natural choice of the seed value would be the one that best approximates the expected result. It turns out that in most cases, the best seed value can be quite far from this natural choice. When we evaluate a monotone function f(a)$f(a)$ in the interval [_amin,_amax]$[a_{\min },a_{\max }]$, by building the sequence _xn$x_n$ defined by the Newton–Raphson iteration, the natural choice consists in choosing _x0$x_0$ equal to the arithmetic mean of the endpoint values. This minimizes the maximum possible distance between _x0$x_0$ and f(a)$f(a)$. And yet, if we perform n$n$ iterations, what matters is to minimize the maximum possible distance between _xn$x_n$ and f(a)$f(a)$. In several examples, the value of the best starting point varies rather significantly with the number of iterations.     

A parameterized view on matroid optimization problems

Matroid theory gives us powerful techniques for understanding combinatorial optimization problems and for designing polynomial-time algorithms. However, several natural matroid problems, such as 3-matroid intersection, are NP-hard. Here we investigate these problems from the parameterized complexity point of view: instead of the trivial n^O(k)$n^{O\left(k\right)}$ time brute force algorithm for finding a k$k$-element solution, we try to give algorithms with uniformly polynomial (i.e., f(k)⋅n^O(1)$f\left(k\right)\cdot n^{O\left(1\right)}$) running time. The main result is that if the ground set of a represented linear matroid is partitioned into blocks of size ?$?$, then we can determine in randomized time f(k,?)⋅n^O(1)$f(k,?)\cdot n^{O\left(1\right)}$ whether there is an independent set that is the union of k$k$ blocks. As a consequence, algorithms with similar running time are obtained for other problems such as finding a k$k$-element set in the intersection of ?$?$ matroids, or finding k$k$ terminals in a network such that each of them can be connected simultaneously to the source by ?$?$ disjoint paths.     

State-complexity hierarchies of uniform languages of alphabet-size length

We study the state complexity of certain simple languages. If A$A$ is an alphabet of k$k$ letters, then a k$k$-language   is a nonempty set of words of length k$k$, that is, a uniform language of length k$k$. We show that the minimal state complexity of a k$k$-language is k+2$k+2$, and the maximal, (k^k−1−1)/(k−1)+2^k+1$(k^{k-1}-1)/(k-1)+2^k+1$. We prove constructively that, for every i$i$ between the minimal and maximal bounds, there is a language of state complexity i$i$. We introduce a class of automata accepting sets of words that are permutations of A$A$; these languages define a complete hierarchy of complexities between k²−k+3$k^2-k+3$ and 2^k+1$2^k+1$. The languages of another class of automata, based on k$k$-ary trees, define a complete hierarchy of complexities between 2^k+1$2^k+1$ and (k^k−1−1)/(k−1)+2^k+1$(k^{k-1}-1)/(k-1)+2^k+1$. This provides new examples of uniform languages of maximal complexity.     

Finding the nucleolus of any n-person cooperative game by a single linear program

In this paper we show a new method for calculating the nucleolus by solving a unique minimization linear program with O(4ⁿ)$O(4^n)$ constraints whose coefficients belong to {−1,0,1}$\{-1,0,1\}$. We discuss the need of having all these constraints and empirically prove that they can be reduced to O(_kmax2ⁿ)$O(k_{\mathit{max}}{2}^n)$, where k_max is a positive integer comparable with the number of players. A computational experience shows the applicability of our method over (pseudo)random transferable utility cooperative games with up to 18 players.     

Optimal fault-tolerant embedding of paths in twisted cubes

The twisted cube is an important variation of the hypercube. It possesses many desirable properties for interconnection networks. In this paper, we study fault-tolerant embedding of paths in twisted cubes. Let _TQn(V,E)${\mathit{TQ}}_n(V,E)$ denote the n-dimensional twisted cube. We prove that a path of length l   can be embedded between any two distinct nodes with dilation 1 for any faulty set F⊂V(_TQn)∪E(_TQn)$F\subset V({\mathit{TQ}}_n)\cup E({\mathit{TQ}}_n)$ with |F|?n-3$\left|F\right|?n-3$ and any integer l   with 2^n-1-1?l?|V(_TQn-F)|-1$2^{n-1}-1?l?|V({\mathit{TQ}}_n-F)|-1$ (n?3$n?3$). This result is optimal in the sense that the embedding has the smallest dilation 1. The result is also complete in the sense that the two bounds on path length l   and faulty set size |F|$\left|F\right|$ for a successful embedding are tight. That is, the result does not hold if l?2^n-1-2$l?2^{n-1}-2$ or |F|?n-2$\left|F\right|?n-2$. We also extend the result on (n-3)$(n-3)$-Hamiltonian connectivity of _TQn${\mathit{TQ}}_n$ in the literature.