Single-molecule circuits with well-defined molecular conductance

We measure the conductance of amine-terminated molecules by breaking Au point contacts in a molecular solution at room temperature. We find that the variability of the observed conductance for the diamine molecule-Au junctions is much less than the variability for diisonitrile- and dithiol-Au junctions. This narrow distribution enables unambiguous conductance measurements of single molecules. For an alkane diamine series with 2-8 carbon atoms in the hydrocarbon chain, our results show a systematic trend in the conductance from which we extract a tunneling decay constant of 0.91 +/- 0.03 per methylene group. We hypothesize that the diamine link binds preferentially to undercoordinated Au atoms in the junction. This is supported by density functional theory-based calculations that show the amine binding to a gold adatom with sufficient angular flexibility for easy junction formation but well-defined electronic coupling of the N lone pair to the Au. Therefore, the amine linkage leads to well-defined conductance measurements of a single molecule junction in a statistical study.     

Simultaneous determination of conductance and thermopower of single molecule junctions

We report the first concurrent determination of conductance (G) and thermopower (S) of single-molecule junctions via direct measurement of electrical and thermoelectric currents using a scanning tunneling microscope-based break-junction technique. We explore several amine-Au and pyridine-Au linked molecules that are predicted to conduct through either the highest occupied molecular orbital (HOMO) or the lowest unoccupied molecular orbital (LUMO), respectively. We find that the Seebeck coefficient is negative for pyridine-Au linked LUMO-conducting junctions and positive for amine-Au linked HOMO-conducting junctions. Within the accessible temperature gradients (<30 K), we do not observe a strong dependence of the junction Seebeck coefficient on temperature. From histograms of thousands of junctions, we use the most probable Seebeck coefficient to determine a power factor, GS(2), for each junction studied, and find that GS(2) increases with G. Finally, we find that conductance and Seebeck coefficient values are in good quantitative agreement with our self-energy corrected density functional theory calculations.     

Dissecting contact mechanics from quantum interference in single-molecule junctions of stilbene derivatives

Electronic factors in molecules such as quantum interference and cross-conjugation can lead to dramatic modulation and suppression of conductance in single-molecule junctions. Probing such effects at the single-molecule level requires simultaneous measurements of independent junction properties, as conductance alone cannot provide conclusive evidence of junction formation for molecules with low conductivity. Here, we compare the mechanics of the conducting para-terminated 4,4'-di(methylthio)stilbene and moderately conducting 1,2-bis(4-(methylthio)phenyl)ethane to that of insulating meta-terminated 3,3'-di(methylthio)stilbene single-molecule junctions. We simultaneously measure force and conductance across single-molecule junctions and use force signatures to obtain independent evidence of junction formation and rupture in the meta-linked cross-conjugated molecule even when no clear low-bias conductance is measured. By separately quantifying conductance and mechanics, we identify the formation of atypical 3,3'-di(methylthio)stilbene molecular junctions that are mechanically stable but electronically decoupled. While theoretical studies have envisaged many plausible systems where quantum interference might be observed, our experiments provide the first direct quantitative study of the interplay between contact mechanics and the distinctively quantum mechanical nature of electronic transport in single-molecule junctions.     

Force-conductance correlation in individual molecular junctions

Conducting atomic force microscopy is an attractive approach enabling the correlation of mechanical and electrical properties in individual molecular junctions. Here we report on measurements of gold-gold and gold-octanedithiol-gold junctions. We introduce two-dimensional histograms in the form of scatter plots to better analyze the correlation between force and conductance. In this representation, the junction-forming octanedithiol compounds lead to a very clear step in the force-conductance data, which is not observed for control monothiol compounds. The conductance found for octanedithiols is in agreement with the idea that junction conductance is dominated by a single molecule.     

Formation and self-breaking mechanism of stable atom-sized junctions

The self-breaking mechanism of gold junctions is studied by investigating stability of the atom-sized contacts. The single atom contact lifetime increases from about 0.02 to 200 s upon decreasing the junction stretching speed, while at the same time, the breaking force diminishes logarithmically. We find that the junction self-breaking processes involve sufficient atomic rearrangements, which thereby allow complete self-compensation of externally introduced strain at 0.8 pm/s. The present results have important implications on fabrication of stable single molecule junctions.     

Coupled surface-enhanced Raman spectroscopy and electrical conductivity measurements of 1,4-phenylene diisocyanide in molecular electronic junctions

Probing the structure of molecules in a metal-molecule-metal junction under an applied voltage is critical for understanding molecular electron transport properties. We present an approach that allows recording surface-enhanced Raman spectra simultaneously with electrical measurements of a monolayer of molecules in molecular electronic junctions. 1,4-Phenylene diisocyanide in two different types of junctions was used to illustrate the approach. The results show that the molecular integrity was intact in the molecular junctions and under the applied bias. The monolayer sensitivity of the approach provides a new powerful tool for characterizing molecular structure in a molecular electronic junction.     

Highly conductive single molecular junctions by direct binding of π-conjugated molecule to metal electrodes

We have investigated electrical conductance of the single C₆₀ and benzene molecules bridging between metal electrodes. The single C₆₀ and benzene molecular junctions were prepared in ultra high vacuum. The single molecular junctions showed the high conductance values (around 0.1–1 G₀: G₀ = 2e²/h), which were comparable to that of the metal atomic contact. The highly conductive single molecular junctions could be prepared by direct binding of the π-conjugated organic molecule to the metal electrodes without the use of anchoring groups. For comparison, the single 1,4-benzenediamine molecular junction was investigated in solution. The benzene molecule was bound to the Au electrodes via amine (anchoring group) for the single 1,4-benzenediamine molecular junction. The conductance of the single 1,4-benzenediamine molecular junction was 8 × 10⁻³G_0. It was suggested that the anchoring groups acted as resistive spacers between the molecule and metal.     

Fabrication of Reproducible,Integration‐Compatible Hybrid Molecular/Si Electronics

Reproducible molecular junctions can be integrated within standard CMOS technology. Metal–molecule–semiconductor junctions are fabricated by direct Si–C binding of hexadecane or methyl‐styrene onto oxide‐free H‐Si(111) surfaces, with the lateral size of the junctions defined by an etched SiO₂ well and with evaporated Pb as the top contact. The current density, J, is highly reproducible with a standard deviation in log(J) of 0.2 over a junction diameter change from 3 to 100 μm. Reproducibility over such a large range indicates that transport is truly across the molecules and does not result from artifacts like edge effects or defects in the molecular monolayer. Device fabrication is tested for two n‐Si doping levels. With highly doped Si, transport is dominated by tunneling and reveals sharp conductance onsets at room temperature. Using the temperature dependence of current across medium‐doped n‐Si, the molecular tunneling barrier can be separated from the Si‐Schottky one, which is a 0.47 eV, in agreement with the molecular‐modified surface dipole and quite different from the bare Si–H junction. This indicates that Pb evaporation does not cause significant chemical changes to the molecules. The ability to manufacture reliable devices constitutes important progress toward possible future hybrid Si‐based molecular electronics.     

Local ionic and electron heating in single-molecule junctions

A basic aim in molecular electronics is to understand transport through a single molecule connected to two electrodes. Substantial progress towards this goal has been made over the past decade as a result of advances in both experimental techniques and theoretical methods. Nonetheless, a fundamental and technologically important issue, current-induced local heating of molecules, has received much less attention. Here, we report on a combined experimental and theoretical study of local heating in single molecules (6-, 8- and 10-alkanedithiol) covalently attached to two gold electrodes as a function of applied bias and molecular length. We find that the effective local temperature of the molecular junction first increases with applied bias, and then decreases after reaching a maximum. At fixed bias, the effective temperature decreases with increasing molecular length. These experimental findings are in agreement with hydrodynamic predictions, which include both electron-phonon and electron-electron interactions.     

Stretching and breaking of a molecular junction

Density functional theory (DFT) calculations based on band structure are used to investigate the electromechanical properties of a molecular junction consisting of a dithiolbenzene molecule sandwiched between two gold slabs. This represents a prototypical system for the field of molecular electronics; such a system has previously been studied in break-junction measurements and electron-transport calculations. The stretching and breaking behavior of the junction is analyzed for different geometric conformations, and it is found that the breakage occurs through dissociation of one of the sulfur-gold bonds with a maximum force of 1.25 nN. The molecular electronic states shift during stretching, and, at the point of highest stress in the junction, the highest occupied molecular orbital (HOMO) of the molecule is located exactly at the Fermi level.     

Assembling molecular electronic junctions one molecule at a time

Diffusion of metal atoms onto a molecular monolayer attached to a conducting surface permits electronic contact to the molecules with minimal heat transfer or structural disturbance. Surface-mediated metal deposition (SDMD) involves contact between "cold" diffusing metal atoms and molecules, due to shielding of the molecules from direct exposure to metal vapor. Measurement of the current through the molecular layer during metal diffusion permits observation of molecular conductance for junctions containing as few as one molecule. Discrete conductance steps were observed for 1-10 molecules within a monolayer during a single deposition run, corresponding to "recruitment" of additional molecules as the contact area between the diffusing Au layer and molecules increases. For alkane monolayers, the molecular conductance measured with SDMD exhibited an exponential dependence on molecular length with a decay constant (β) of 0.90 per CH(2) group, comparable to that observed by other techniques. Molecular conductance values were determined for three azobenzene molecules, and correlated with the offset between the molecular HOMO and the contact Fermi level, as expected for hole-mediated tunneling. Current-voltage curves were obtained during metal deposition showed no change in shape for junctions containing 1, 2, and 10 molecules, implying minimal intermolecular interactions as single molecule devices transitioned into several molecules devices. SDMD represents a "soft" metal deposition method capable of providing single molecule conductance values, then providing quantitative comparisons to molecular junctions containing 10(6) to 10(10) molecules.     

Switching Dynamics of an Underdamped Josephson Junction Coupled to a Microwave Cavity

Current-biased Josephson junctions are promising candidates for the detection of single photons in the microwave frequency domain. With modern fabrication technologies, the switching properties of the junction can be adjusted to achieve quantum limited sensitivity. Namely, the width of the switching current distribution can be reduced well below the current amplitude produced by a single photon trapped inside a superconducting cavity. However, for an effective detection a strong junction cavity coupling is required, providing nonlinear system dynamics. We compare experimental findings for our prototype device with a theoretical analysis aimed to describe the switching dynamics of junctions under microwave irradiation. Measurements are found in qualitative agreement with our simulations.     

Shot noise measurements on a single molecule

We report measurements of shot noise in the current through a single D2 molecule. The molecular junctions were formed by means of the mechanically controllable break junction technique. The configuration of the D2 molecule bridging the gap between two Pt tips is verified by use of point contact spectroscopy. Maintaining the same junction shot noise measurements were performed and the observed quantum suppression shows that conductance is carried dominantly by a single, almost fully transparent conductance channel. This observation allows us to decide between conflicting model calculations for this system, and this may serve as a benchmark for further computations on molecular junctions.     

Measurement of current-induced local heating in a single molecule junction

We have studied the current-induced local heating effects in single molecules covalently bound to two electrodes by measuring the force required to break the molecule-electrode bonds under various conditions. The breakdown process is thermally activated, which is used to extract the effective temperature of the molecular junction as a function of applied bias voltage. We have also performed first-principles calculations of both local heating and current-induced force effects, and the results are in good agreement with the experimental findings.     

Mechanically Controllable Break Junctions for Molecular Electronics

A mechanically controllable break junction (MCBJ) represents a fundamental technique for the investigation of molecular electronic junctions, especially for the study of the electronic properties of single molecules. With unique advantages, the MCBJ technique has provided substantial insight into charge transport processes in molecules. In this review, the techniques for sample fabrication, operation and the various applications of MCBJs are introduced and the history, challenges and future of MCBJs are discussed.     

Molecular simulations of stretching gold nanowires in solvents

The effect of solvent on the elongation of gold nanowires has been further studied through molecular simulations. For a simple Lennard-Jones solvent (propane), which is a non-bonded solvent, extensive molecular dynamics (MD) runs demonstrated that below the melting point of gold nanowires, the solvent effect on the elongation properties of Au nanowires is minimal. In thiol organic liquid, such as in benzenedithiol (BDT), the situation is much more complicated due to the Au-BDT chemical bonding. Here, we present the initial adsorption structure of BDT on a stretched gold nanowire through grand canonical Monte Carlo (GCMC) simulations. A recently developed force field for the BDT-Au chemical bonding was implemented in the simulations. We found that the packing density of the bonded BDT on the surface of Au nanowire is larger than that on an extended Au(111) surface. The results from this work are helpful in understanding the underlying mechanism of the formation of Au-BDT-Au junctions implemented in molecular conductance measurements.     

Effects of calcium-phosphate topography on osteoblast mechanobiology determined using a cytodetacher

The Human fetal osteoblast (hFOB) cell morphology, adhesion force, and proliferation on a calcium-phosphate (Ca-P) micropattern surface were investigated and the mechanobiology was investigated by a cytodetachment test. Ca-P-coated groove patterns with 3.0-μm-deep grooves (C3), 4.5-μm-deep grooves (C4), and 5.5-μm-deep grooves (C5) were produced on silicon wafers using photolithography and wet etching techniques. The grooved substrates were coated with a 200-nm-thick layer of titanium (bond coat) and a 200-nm-thick layer of calcium phosphate (top coat) using a sputtering system. Smooth Ca-P-coated Si wafers were used as control surfaces. Analysis of the scanning electron microscopy observations shows that cells on the Ca-P micropattern showed spreading and elongation. The MTT (3-(4, 5-dimethylthiazol-2-yl)-2, 5-diphenyltetrazolium bromide) assay indicated that C3 and C4 specimens had a significantly higher number of cells than did the control group after 5- and 15-day cultures. The cyto-compatibility of specimens was quantitatively evaluated using a cytodetacher, which directly measures the detachment shear force of an individual cell to the substrate. After 30-min culture, the cell adhesion forces were 38.4 nN for the smooth specimen, 140.8 nN for C3, 124.2 nN for C4, and 67.1 nN for C5. The results indicate that the cell adhesion force is influenced by cell shape and the Ca-P grooved patterns affect the cell shape and cytoskeletal structure, thus influence cell proliferation and cell adhesion force. The cytodetachment test with nanonewton resolution is a sensitive method for studying cell-biomaterial interaction.     

Unambiguous one-molecule conductance measurements under ambient conditions

One of the challenging goals of molecular electronics is to wire exactly one molecule between two electrodes. This is generally nontrivial under ambient conditions. We describe a new and straightforward protocol for unambiguously isolating a single organic molecule on a metal surface and wiring it inside a nanojunction under ambient conditions. Our strategy employs C(60) terminal groups which act as molecular beacons allowing molecules to be visualized and individually targeted on a gold surface using an scanning tunneling microscope. After isolating one molecule, we then use the C(60) groups as alligator clips to wire it between the tip and surface. Once wired, we can monitor how the conductance of a purely one molecule junction evolves with time, stretch the molecule in the junction, observing characteristic current plateaus upon elongation, and also perform direct I-V spectroscopy. By characterizing and controlling the junction, we can draw stronger conclusions about the observed variation in molecular conductance than was previously possible.     

Amine-gold linked single-molecule circuits: experiment and theory

A combination of theory and experiment is used to quantitatively understand the conductance of single-molecule benzenediamine-gold junctions. A newly developed analysis is applied to a measured junction conductance distribution, based on 59 000 individual conductance traces, which has a clear peak at 0.0064 G0 and a width of +/-47%. This analysis establishes that the distribution width originates predominantly from variations in conductance across different junctions rather than variations in conductance during junction elongation. Conductance calculations based on density functional theory (DFT) for 15 distinct junction geometries show a similar spread. We show explicitly that differences in local structure have a limited influence on conductance because the amine-Au bonding motif is well-defined and flexible, explaining the narrow distributions seen in the experiments. The minimal impact of junction structure on conductance permits an unambiguous comparison of calculated and measured conductance values and a direct assessment of the widely used DFT theoretical framework. The average calculated conductance (0.046 G0) is found to be seven times larger than experiment. This discrepancy is explained quantitatively in terms of electron correlation effects to the molecular level alignments in the junction.     

Stabilizing single atom contacts by molecular bridge formation

Gold-molecule-gold junctions can be formed by carefully breaking a gold wire in a solution containing dithiolated molecules. Surprisingly, there is little understanding on the mechanical details of the bridge formation process and specifically on the role that the dithiol molecules play themselves. We propose that alkanedithiol molecules have already formed bridges between the gold electrodes before the atomic gold-gold junction is broken. This leads to stabilization of the single atomic gold junction, as observed experimentally. Our data can be understood within a simple spring model.