An integrated microfluidic system using mannose-binding lectin for bacteria isolation and biofilm-related gene detection

Molecular diagnosis of biofilm-related genes (BRGs) in common bacteria that cause periprosthetic joint infections may provide crucial information for clinicians. In this study, several BRGs, including ica, fnbA, and fnbB, were rapidly detected (within 1 h) with a new integrated microfluidic system. Mannose-binding lectin (MBL)-coated magnetic beads were used to isolate these bacteria, and on-chip nucleic acid amplification (polymerase chain reaction, PCR) was then performed to detect BRGs. Both eukaryotic and prokaryotic MBLs were able to isolate common bacterial strains, regardless of their antibiotic resistance, and limits of detection were as low as 3 and 9 CFU for methicillin-resistant Staphylococcus aureus and Escherichia coli, respectively, when using a universal 16S rRNA PCR assay for bacterial identification. It is worth noting that the entire process including bacteria isolation by using MBL-coated beads for sample pre-treatment, on-chip PCR, and fluorescent signal detection could be completed on an integrated microfluidic system within 1 h. This is the first time that an integrated microfluidic system capable of detecting BRGs by using MBL as a universal capturing probe was reported. This integrated microfluidic system might therefore prove useful for monitoring profiles of BRGs and give clinicians more clues for their clinical judgments in the near future.     

Star reduction among minimal length addition chains

An addition chain for a natural number n is a sequence \({1=a_0 < a_1 < \cdots < a_r=n}\) of numbers such that for each 0 < i ≤ r, a _i  = a _j  + a _k for some 0 ≤ k ≤ j < i. The minimal length of an addition chain for n is denoted by ?(n). If j = i ? 1, then step i is called a star step. We show that there is a minimal length addition chain for n such that the last four steps are stars. Then we conjecture that there is a minimal length addition chain for n such that the last \({\lfloor\frac{\ell(n)}{2}\rfloor}\)-steps are stars. We verify that the conjecture is true for all numbers up to 2¹⁸. An application of the result and the conjecture to generate a minimal length addition chain reduce the average CPU time by 23–29% and 38–58% respectively, and memory storage by 16–18% and 26–45% respectively for m-bit numbers with 14 ≤ m ≤ 22.     

An orthogonal analysis method for decoupling the nozzle geometrical parameters of microthrusters

This paper proposes an orthogonal analysis method for decoupling the multiple nozzle geometrical parameters of microthrusters, thus an reconfigured design can be implemented to generate a proper thrust. In this method, the effects of various nozzle geometrical parameters, including throat width W _t , half convergence angle θ _in , half divergence angle θ _out , exit-to-throat section ratio W _e /W _t and throat radius of the curvature R _t /W _t , on the performance of microthrusters are sorted by range analysis. Analysis results show that throat width seriously affects thrust because range value of 67.53 mN is extremely larger than the range value of other geometry parameters. For average specific impulse (ASI), the range value of exit-to-throat section ratio W _e /W _t and half divergence angle θ _out are 4.82 s and 3.72 s, respectively. Half convergence angle with the range value of 0.39 s and throat radius with 0.32 s have less influence on ASI compared with exit-to-throat section ratio and half divergence angle. When increasing the half convergence angle from 10° to 40° and throat radius of the curvature from 3 to 9, average specific impulse initially decreases and then increases. A MEMS solid propellant thruster (MSPT) with the reconfigured geometrical parameters of nozzle is fabricated to verify the feasibility of the proposed method. The thrust of the microthruster can reach 25 mN. Power is estimated to be 0.84 W. This work provides design guideline to reasonably configure geometry parameters of microthruster.     

Filtration of aerosol particles by cylindrical fibers within a parallel and staggered array

The World Health Organization (WHO) in 2013 reported that more than seven million unexpected losses every year are credited to air contamination. Because of incredible adaptability and expense viability of fibrous filters, they are broadly used for removing particulates from gasses. The influence of appropriate parameters, e.g., the fiber arrangement, solid volume fraction (SVF or α), fluid flow face velocity (mean inlet velocity), and filter thickness (I _x ), on pressure drop and deposition efficiency are researched. Furthermore, to study the effects of variation of the laminar flow regime and fiber’s cross-sectional shape on the deposition of particles, only a single square fiber has been placed in a channel. By means of finite volume method (FVM), the 2-D motion of 100–1000 nm particles was investigated numerically. The Lagrangian method has been employed and the Saffman’s lift, Drag, and Brownian forces have been considered to affect this motion. Contribution of increasing the Reynolds number to filtration performance increased with smaller fine aerosols to a level of 59.72 %. However, for over 500 nm, the Re = 100 has more efficient results up to 26.97 %. Remarkably, the single square fiber in Re = 200 regime performs similarly to the optimum choice of multi-fibrous filters. It was portrayed the parallel circular multi-fibrous filter with a ratio of horizontal-to-vertical distances between fibers, l/h = 1.143; α = 0.687, I _x  = 116.572, and h/d _f  = 1.0 is the most efficient filter’s structure. The increase in the ratio of vertical distances between fibers-to-fiber’s diameter (h/d _f ) and decrease in SVF or α, results in a drastically decrement of the filtration performance of both parallel and staggered structures. The obtained results have been validated with previous research findings.     

Study on TSV isolation liners for a Via Last approach with the use in 3D-WLP for MEMS

This paper discusses approaches for the isolation of deep high aspect ratio through silicon vias (TSV) with respect to a Via Last approach for micro-electro-mechanical systems (MEMS). Selected TSV samples have depths in the range of 170…270 µm and a diameter of 50 µm. The investigations comprise the deposition of different layer stacks by means of subatmospheric and plasma enhanced chemical vapour deposition (PECVD) of tetraethyl orthosilicate; Si(OC₂H₅)₄ (TEOS). Moreover, an etch-back approach and the selective deposition on SiN were also included in the investigations. With respect to the Via Last approach, the contact opening at the TSV bottom by means of a specific spacer-etching method have been addressed within this paper. Step coverage values of up to 74 % were achieved for the best of those approaches. As an alternative to the SiO₂-isolation liners a polymer coating based on the CVD of Parylene F was investigated, which yields even higher step coverage in the range of 80 % at the lower TSV sidewall for a surface film thickness of about 1000 nm. Leakage current measurements were performed and values below 0.1 nA/cm² at 10 kV/cm were determined for the Parylene F films which represents a promising result for the aspired application to Via Last MEMS-TSV.     

Generation and distillation of non-Gaussian entanglement from nonclassical photon statistics

With a product state of the form \({{\rho}_{\rm in} = {\rho}_{a} \otimes |0 \rangle_b {_b} \langle 0|}\) as input to a beam splitter, the output two-mode state ρ _out is shown to be negative under partial transpose (NPT) whenever the photon number distribution (PND) statistics { p(n _a ) } associated with the possibly mixed state ρ _a of the input a-mode is antibunched or otherwise nonclassical, i.e., whenever { p(n _a ) } fails to respect any one of an infinite sequence of necessary and sufficient classicality conditions. Negativity under partial transpose turns out to be a necessary and sufficient test for entanglement of ρ _out which is generically non-Gaussian. The output of a PND distribution is further shown to be distillable if any one of an infinite sequence of three term classicality conditions is violated.     

Negation-Limited Complexity of Parity and Inverters

In negation-limited complexity, one considers circuits with a limited number of NOT gates, being motivated by the gap in our understanding of monotone versus general circuit complexity, and hoping to better understand the power of NOT gates. We give improved lower bounds for the size (the number of AND/OR/NOT) of negation-limited circuits computing Parity and for the size of negation-limited inverters. An inverter is a circuit with inputs x ₁,…,x _n and outputs ¬ x ₁,…,¬ x _n . We show that: (a) for n=2 ^r ?1, circuits computing Parity with r?1 NOT gates have size at least 6n?log?₂(n+1)?O(1), and (b) for n=2 ^r ?1, inverters with r NOT gates have size at least 8n?log?₂(n+1)?O(1). We derive our bounds above by considering the minimum size of a circuit with at most r NOT gates that computes Parity for sorted inputs x ₁≥???≥x _n . For an arbitrary r, we completely determine the minimum size. It is 2n?r?2 for odd n and 2n?r?1 for even n for ?log?₂(n+1)??1≤r≤n/2, and it is ?3n/2??1 for r≥n/2. We also determine the minimum size of an inverter for sorted inputs with at most r NOT gates. It is 4n?3r for ?log?₂(n+1)?≤r≤n. In particular, the negation-limited inverter for sorted inputs due to Fischer, which is a core component in all the known constructions of negation-limited inverters, is shown to have the minimum possible size. Our fairly simple lower bound proofs use gate elimination arguments in a somewhat novel way.     

Error bounds for complementarity problems with tridiagonal nonlinear functions

In this paper we consider the complementarity problem NCP(f) with f(x) = Mx + φ(x), where M ∈ R ^n×n is a real matrix and φ is a so-called tridiagonal (nonlinear) mapping. This problem occurs, for example, if certain classes of free boundary problems are discretized. We compute error bounds for approximations \({\hat x}\) to a solution x* of the discretized problems. The error bounds are improved by an iterative method and can be made arbitrarily small. The ideas are illustrated by numerical experiments.     

Effects of topological changes in microchannel geometries on the asymmetric breakup of a droplet

Passive asymmetric breakups of a droplet could be done in many microchannels of various geometries. In order to study the effects of different geometries on the asymmetric breakup of a droplet, four types of asymmetric microchannels with the topological equivalence of geometry are designed, which are T-90, Y-120, Y-150, and I-180 microchannels. A three-dimensional volume of fluid multiphase model is employed to investigate the asymmetric rheological behaviors of a droplet numerically. Three regimes of rheological behaviors as a function of the capillary numbers Ca and the asymmetries As defined by As = (b1 ? b2)/(b1 + b2) (where b1 and b2 are the widths of two asymmetric sidearms) have been observed. A power law model based on three major factors (Ca, As and the initial volume ratio r ₀) is employed to describe the volume ratio of two daughter droplets. The analysis of pressure fields shows that the pressure gradient inside the droplet is one of the major factors causing the droplet translation during its asymmetric breakup. Besides the above similarities among various microchannels, the asymmetric breakup in them also have some slight differences as various geometries have different enhancement or constraint effects on the translation of the droplet and the cutting action of flows. It is disclosed that I-180 microchannel has the smallest critical capillary number, the shortest splitting time, and is hardest to generate satellite droplets.     

A new strategy for generating shortest addition sequences

An addition sequence problem is given a set of numbers X = {n ₁, n ₂, . . . , n _m }, what is the minimal number of additions needed to compute all m numbers starting from 1? This problem is NP-complete. In this paper, we present a branch and bound algorithm to generate an addition sequence with a minimal number of elements for a set X by using a new strategy. Then we improve the generation by generalizing some results on addition chains (m = 1) to addition sequences and finding what we will call a presumed upper bound for each n _j , 1 ≤ j ≤ m, in the search tree.     

<Emphasis Type="Italic">α</Emphasis>-Systems of differential inclusions and their unification

This paper introduces α-systems of differential inclusions on a bounded time interval [t₀, ?] and defines α-weakly invariant sets in [t₀, ?] × ?_n, where ?_n is a phase space of the differential inclusions. We study the problems connected with bringing the motions (trajectories) of the differential inclusions from an α-system to a given compact set M ? ?_n at the moment ? (the approach problems). The issues of extracting the solvability set W ? [t₀, ?] × ?ⁿ in the problem of bringing the motions of an α-system to M and the issues of calculating the maximal α-weakly invariant set W^c ? [t₀, ?] × ?ⁿ are also discussed. The notion of the quasi-Hamiltonian of an α-system (α-Hamiltonian) is proposed, which seems important for the problems of bringing the motions of the α-system to M.     

Separation and concentration of <Emphasis Type="Italic">Phytophthora ramorum</Emphasis> sporangia by inertial focusing in curving microfluidic flows

We present an integrated microfluidic system for performing isolation and concentration of Phytophthora ramorum pathogens using a chip whose working principle is based on inertial lateral migration in curving flows. The chip was fabricated from multiple layers of thermoplastic polymers and features an embedded spiral separation channel along with peristaltic microvalves for fluidic operation and process control. A pumping system paired with a fully programmable pressure manifold is used to boost concentration levels by recirculating the sample liquid multiple times through the separation chip, making it possible to reduce sample volumes from 10 to 1 mL or less. The system was calibrated using fluorescent polymer particles with a nominal diameter of 30 µm which is comparable to that of P. ramorum sporangia. The separation process has been shown to be highly effective and more than 99% of the beads can be recovered in the concentrated batch. Experiments conducted with P. ramorum sporangia have shown that a 5.3-fold increase in pathogen content with 95% recovery can be achieved using three subsequent concentration cycles. The utility of the method has been validated by processing a sample derived from infested Rhododendron leaves where a 6.1-fold increase in the concentration of P. ramorum has been obtained after four concentration cycles. Although specifically designed and demonstrated for sporangia of P. ramorum, the method and related design rules can easily be extended to other microbial organisms, effectively supporting bioanalytical applications where efficient, high-throughput separation of target species is of primary concern.     

Multi-axial non-contact in situ micromanipulation by steady streaming around two oscillating cylinders on holonomic miniature robots

In the field of micromanipulation, an in situ three-axial rotation of a microscale object remains difficult to realize, with rotational resolution and repeatability remaining low. In this paper, we describe the fundamental principle, properties, and experimental results of multi-axial non-contact in situ micromanipulation of an egg cell driven by steady streaming generated around an oscillating cylinder. A continuously oscillating cylinder generates the steady streaming that draws an egg cell toward the cylinder. If it is trapped by an eddy near the tip of the cylinder, it continuously rotates around the vertical axis at a fixed point. If it is trapped by a swirl flow generated around the side of the cylinder, it rotates around the horizontal axis. We define Reynolds number, R_e, as ar_cω/ν, where a is half of the oscillation’s amplitude, r_c is the cylinder’s radius, ω is the oscillation’s angular frequency, and ν is the kinematic viscosity. We demonstrate that the conditions of the vertical and horizontal rotations are determined by two dimensionless numbers: R_e and a/r_c. In our experiments, we obtained rotational resolutions of 0.05° and 0.11° and maximal angular velocities of 34.8°/s and 188°/s for the vertical and horizontal rotations, respectively. We also developed unique micromanipulation methods using two oscillating pipettes attached to holonomic miniature robots. We successfully manipulated five degrees of freedom (DoF) of the cell (three posture angles and two translational displacements along the X and Y axes) with the steady streaming. The proposed method enables a multi-axial, non-contact, in situ, and compact micromanipulation independent of the electrical, optical, magnetic, shape, and stiffness properties of the objects; moreover, it can be applied in microfluidics, biomedical, and heterogeneous microassembly applications.     

Fabrication of piezoelectric multilayer thin-film actuators

In this study, we fabricated multilayer ceramics (MLCs) composed of multilayered Pb(Zr,Ti)O₃ (PZT) piezoelectric thin films with internal electrodes and evaluated their dielectric and piezoelectric properties. The stack of PZT ferroelectric layers (550 nm) and SrRuO₃ (SRO, 80 nm) electrodes were alternatively deposited on Pt/Ti-coated silicon-on-insulator substrates by radio-frequency magnetron sputtering. The MLCs composed of one, three, and five PZT layers were fabricated by the alternate sputtering deposition of PZT ferroelectric layers and SRO electrodes through the movable shadow mask. The capacitances of MLCs were proportionally increased with the number of PZT layers, while their relative dielectric constants were almost same among the each MLC. The MLCs exhibited symmetric and saturated P–E hysteresis loops similar to the conventional PZT thin films. We estimated that the piezoelectric properties of MLCs by FEM simulation, and confirmed that the effective transverse piezoelectric coefficients (d _31,eff ) increased with the number of PZT layers. The piezoelectric coefficients calculated to be d _31,eff  = ?2964 pC/N at 25 PZT layers, which is much higher than those of conventional single-layer piezoelectric thin films.     

Some properties of the disjunctive languages contained in <Emphasis Type="Italic">Q</Emphasis>

The set of all primitive words Q over an alphabet X was first defined and studied by Shyr and Thierrin (Proceedings of the 1977 Inter. FCT-Conference, Poznan, Poland, Lecture Notes in Computer Science 56. pp. 171–176 (1977)). It showed that for the case |X| ≥ 2, the set along with \({Q^{(i)} = \{f^i\,|\,f \in Q\}, i\geq 2}\) are all disjunctive. Since then these disjunctive sets are often be quoted. Following Shyr and Thierrin showed that the half sets \({Q_{ev} = \{f \in Q\,|\,|f| = {\rm even}\}}\) and Q _od = Q \ Q _ev of Q are disjunctive, Chien proved that each of the set \({Q_{p,r}= \{u\in Q\,|\,|u|\equiv r\,(mod\,p) \},\,0\leq r < p}\) is disjunctive, where p is a prime number. In this paper, we generalize this property to that all the languages \({Q_{n,r}= \{u\in Q\,|\,|u|\equiv r\,(mod\,n) \},\, 0\leq r < n}\) are disjunctive languages, where n is any positive integer. We proved that for any n ≥ 1, k ≥ 2, (Q _n,0) ^k are all regular languages. Some algebraic properties related to the family of languages {Q _n,r | n ≥ 2, 0 ≤ r < n } are investigated.     

Study on microchannel flows with a sudden contraction–expansion at a wide range of Knudsen number using lattice Boltzmann method

Numerical simulations have been performed on the pressure-driven rarefied flow through channels with a sudden contraction–expansion of 2:1:2 using isothermal two and three-dimensional lattice Boltzmann method (LBM). In the LBM, a Bosanquet-type effective viscosity and a modified second-order slip boundary condition are used to account for the rarefaction effect on gas viscosity to cover the slip and transition flow regimes, that is, a wider range of Knudsen number. Firstly, the in-house LBM code is verified by comparing the computed pressure distribution and flow pattern with experimental ones measured by others. The verified code is then used to study the effects of the outlet Knudsen number Kn _o , driving pressure ratio P _i /P _o , and Reynolds number Re, respectively, varied in the ranges of 0.001–1.0, 1.15–5.0, and 0.02–120, on the pressure distributions and flow patterns as well as to document the differences between continuum and rarefied flows. Results are discussed in terms of the distributions of local pressure, Knudsen number, centerline velocity, and Mach number. The variations of flow patterns and vortex length with Kn _o and Re are also documented. Moreover, a critical Knudsen number is identified to be Kn _oc  = 0.1 below and above which the behaviors of nonlinear pressure profile and velocity distribution and the variations of vortex length with Re upstream and downstream of constriction are different from those of continuum flows.     

Inertial particle focusing dynamics in a trapezoidal straight microchannel: application to particle filtration

Inertial microfluidics has emerged recently as a promising tool for high-throughput manipulation of particles and cells for a wide range of flow cytometric tasks including cell separation/filtration, cell counting, and mechanical phenotyping. Inertial focusing is profoundly reliant on the cross-sectional shape of channel and its impacts on not only the shear field but also the wall-effect lift force near the wall region. In this study, particle focusing dynamics inside trapezoidal straight microchannels was first studied systematically for a broad range of channel Re number (20 < Re < 800). The altered axial velocity profile and consequently new shear force arrangement led to a cross-lateral movement of equilibration toward the longer side wall when the rectangular straight channel was changed to a trapezoid; however, the lateral focusing started to move backward toward the middle and the shorter side wall, depending on particle clogging ratio, channel aspect ratio, and slope of slanted wall, as the channel Reynolds number further increased (Re > 50). Remarkably, an almost complete transition of major focusing from the longer side wall to the shorter side wall was found for large-sized particles of clogging ratio K ~ 0.9 (K = a/H_min) when Re increased noticeably to ~ 650. Finally, based on our findings, a trapezoidal straight channel along with a bifurcation was designed and applied for continuous filtration of a broad range of particle size (0.3 < K < 1) exiting through the longer wall outlet with ~ 99% efficiency (Re < 100).     

A linear-time algorithm for finding Hamiltonian (<Emphasis Type="Italic">s</Emphasis>, <Emphasis Type="Italic">t</Emphasis>)-paths in odd-sized rectangular grid graphs with a rectangular hole

A grid graph \(G_{\mathrm{g}}\) is a finite vertex-induced subgraph of the two-dimensional integer grid \(G^\infty \). A rectangular grid graph R(m, n) is a grid graph with horizontal size m and vertical size n. A rectangular grid graph with a rectangular hole is a rectangular grid graph R(m, n) such that a rectangular grid subgraph R(k, l) is removed from it. The Hamiltonian path problem for general grid graphs is NP-complete. In this paper, we give necessary conditions for the existence of a Hamiltonian path between two given vertices in an odd-sized rectangular grid graph with a rectangular hole. In addition, we show that how such paths can be computed in linear time.     

Dyonic configurations in nonlinear electrodynamics coupled to general relativity

We consider static, spherically symmetric configurations in general relativity, supported by nonlinear electromagnetic fields with gauge-invariant Lagrangians depending on the single invariant f = F_μνF^μν. After a brief review on black hole (BH) and solitonic solutions, obtained so far with pure electric or magnetic fields, an attempt is made to obtain dyonic solutions, those with both electric and magnetic charges. A general scheme is suggested, leading to solutions in quadratures for an arbitrary Lagrangian function L(f) (up to some monotonicity restrictions); such solutions are expressed in terms of f as a new radial coordinate instead of the usual coordinate r. For the truncated Born-Infeld theory (depending on the invariant f only), a general dyonic solution is obtained in terms of r. A feature of interest in this solution is the existence of a special case with a self-dual electromagnetic field, f ≡ 0 and the Reissner-Nordström metric.     

Threshold quantum secret sharing based on single qubit

Based on unitary phase shift operation on single qubit in association with Shamir’s (t, n) secret sharing, a (t, n) threshold quantum secret sharing scheme (or (t, n)-QSS) is proposed to share both classical information and quantum states. The scheme uses decoy photons to prevent eavesdropping and employs the secret in Shamir’s scheme as the private value to guarantee the correctness of secret reconstruction. Analyses show it is resistant to typical intercept-and-resend attack, entangle-and-measure attack and participant attacks such as entanglement swapping attack. Moreover, it is easier to realize in physic and more practical in applications when compared with related ones. By the method in our scheme, new (t, n)-QSS schemes can be easily constructed using other classical (t, n) secret sharing.