Effect of Ag‐NPs synthesised by Chamaemelum nobile extract on the inflammation and oxidative stress induced by carrageenan in mice paw

An environmentally friendly and rapid procedure was developed to synthesise silver nanoparticles (Ag‐NPs) by Chamaemelum nobile extract and to evaluate its in vivo anti‐inflammatory and antioxidant activities. The ultraviolet–visible absorption spectrum of the synthesised Ag‐NPs showed an absorbance peak at 422. The average size of spherical nanoparticles was 24 nm as revealed by transmission electron microscopy. Fourier transform infra‐red spectroscopy analysis supported the presence of biological active compounds involved in the reduction of Ag ion and X‐ray diffraction confirmed the crystalline structure of the metallic Ag. The anti‐inflammatory and antioxidant activity of the Ag‐NPs was investigated against carrageenan‐induced paw oedema in mice. The levels of malondialdehyde (MDA) and antioxidant enzymes superoxide dismutase, catalase, glutathione peroxidase and inflammatory cytokines tumour necrosis factor (TNF‐α), interferon gamma and interleukin (IL)‐6, IL‐1β were assessed in this respect. The results demonstrated that anti‐inflammatory activity of the Ag‐NPs might be due to the ability of the nanoparticles to reduce IL‐1β, IL‐6 and TNF‐α. Moreover, reduction of antioxidant enzymes along with an increase in MDA level shows that the anti‐inflammatory activity of the synthesised Ag‐NPs by C. nobile is attributed to its ameliorating effect on the oxidative damage.Inspec keywords: silver, nanoparticles, nanofabrication, ultraviolet spectra, visible spectra, particle size, transmission electron microscopy, Fourier transform infrared spectra, X‐ray diffraction, crystal structure, enzymes, molecular biophysics, tumours, biomedical materials, nanomedicineOther keywords: Chamaemelum nobile extract, oxidative stress, mice paw, silver nanoparticles, antiinflammatory activity, antioxidant activity, ultraviolet‐visible absorption spectrum, spherical nanoparticle size, transmission electron microscopy, Fourier transform infrared spectroscopy, biological active compounds, X‐ray diffraction, crystalline structure, carrageenan‐induced paw oedema, malondialdehyde, antioxidant enzymes, superoxide dismutase, catalase, glutathione peroxidase, inflammatory cytokines, tumour necrosis factor, interferon gamma, interleukin, IL‐1β, IL‐6, TNF‐α, MDA level, Ag     

Micro RNA‐30b (inhibitor) nanoparticles suppressed the lipopolysaccharide (LPS)‐induced acute kidney injury

The main aim of present study is to evaluate the effect of miR‐30b on the function of human proximal tubular epithelial cell line HK‐2 cells. For this purpose, miRNA was loaded in an ionically cross‐linked polysaccharide nanoparticle. The authors have demonstrated the influence of miR‐30b mimic and inhibitor in HK‐2 cell killing effect. Lipopolysaccharide (LPS) significantly increased the level of inflammatory cytokines of TNF‐α, IL‐1β and level was further increased with the treatment of PAg‐miR mimic consistent with the cell viability assay. Interestingly, PAg‐miR inhibitor significantly downregulated the expression of inflammatory cytokines and thereby reduced the inflammation in the body. Western blot analysis showed that LPS induced severe apoptosis of HK‐2 cells and the apoptosis was further promoted by the PAg‐miR (mimic). In contrast, PAg‐miR (inhibitor) alleviated the apoptosis of HK‐2 cells as indicated in the significantly reduced levels of Bax and c‐Caspase‐3 proteins. Overall, miR‐30b promoted LPS‐induced HK‐2 cell inflammatory injury by inducing the apoptosis and by releasing inflammatory cytokines, as well as by impairing autophagy process.Inspec keywords: biomedical materials, nanoparticles, molecular biophysics, enzymes, toxicology, injuries, nanomedicine, RNA, cellular biophysics, kidney, proteins, drugs, biochemistryOther keywords: microRNA‐30b, nanoparticles suppressed the lipopolysaccharide (LPS)‐induced, main aim, human proximal tubular epithelial cell line HK‐2 cells, polysaccharide nanoparticle, HK‐2 cell killing effect, inflammatory cytokines, IL‐1β, cell viability assay, PAg‐miR inhibitor, apoptosis, reduced levels, LPS‐induced HK‐2 cell inflammatory injury     

Chitosan nanoparticles loaded with aspirin and 5‐fluororacil enable synergistic antitumour activity through the modulation of NF‐κB/COX‐2 signalling pathway

Based on the enhancement of synergistic antitumour activity to treat cancer and the correlation between inflammation and carcinogenesis, the authors designed chitosan nanoparticles for co‐delivery of 5‐fluororacil (5‐Fu: an as anti‐cancer drug) and aspirin (a non‐steroidal anti‐inflammatory drug) and induced synergistic antitumour activity through the modulation of the nuclear factor kappa B (NF‐κB)/cyclooxygenase‐2 (COX‐2) signalling pathways. The results showed that aspirin at non‐cytotoxic concentrations synergistically sensitised hepatocellular carcinoma cells to 5‐Fu in vitro. It demonstrated that aspirin inhibited NF‐κB activation and suppressed NF‐κB regulated COX‐2 expression and prostaglandin E2 (PGE2) synthesis. Furthermore, the proposed results clearly indicated that the combination of 5‐Fu and aspirin by chitosan nanoparticles enhanced the intracellular concentration of drugs and exerted synergistic growth inhibition and apoptosis induction on hepatocellular carcinoma cells by suppressing NF‐κB activation and inhibition of expression of COX‐2.Inspec keywords: proteins, molecular biophysics, cellular biophysics, biomedical materials, cancer, nanoparticles, drug delivery systems, enzymes, tumours, nanomedicine, drugsOther keywords: chitosan nanoparticles, aspirin, 5‐fluororacil, synergistic antitumour activity, anticancer drug, nonsteroidal antiinflammatory drug, hepatocellular carcinoma cells, NF‐κB activation, NF‐κB regulated COX‐2 expression, PGE2, synergistic growth inhibition, apoptosis induction, prostaglandin E2 synthesis, intracellular concentration, noncytotoxic concentrations, NF‐κB‐cyclooxygenase‐2 signalling pathways, cyclooxygenase‐2, nuclear factor kappa B     

In‐vitro toxicity of carbon nanotube/polylysine colloids to colon cancer cells

Single‐walled carbon nanotubes (SWCNTs) are thoroughly purified and dispersed in an aqueous solution of high molecular weight poly‐L‐lysine (pLlys). Human intestinal epithelial Caco‐2/TC7 cells are incubated with the SWCNT dispersions in pLlys, and their effects on cell viability are studied by image flow cytometry. No significant changes are observed in the cell culture wells up to pLlys concentrations of 10 μg ml⁻¹. However, high mortality is detected at pLlys concentrations of 100 μg ml⁻¹. The presence of oxygen‐free SWCNTs does not modify the effects of pLlys on cell cultures at any of the tested concentrations (≤1 μg ml⁻¹). In addition, SWCNTs having an 8 wt.% of surface oxygen are tested with identical results. Thus, purified SWCNTs, even bearing oxygen functional groups, act as inert particles in the cell culture medium. This result supports the applicability of SWCNTs as carriers in pharmacological formulations against digestive tract diseases.Inspec keywords: single‐wall carbon nanotubes, cellular biophysics, molecular weight, filled polymers, biochemistry, cancer, colloidsOther keywords: surface oxygen, mortality, cell culture wells, image flow cytometry, human intestinal epithelial Caco‐2/TC7 cells, molecular weight, aqueous solution, single walled carbon nanotubes, colon cancer cells, carbon nanotube‐polylysine colloids, toxicity     

Overlapping functional modules detection in PPI network with pair‐wise constrained non‐negative matrix tri‐factorisation

A large amount of available protein–protein interaction (PPI) data has been generated by high‐throughput experimental techniques. Uncovering functional modules from PPI networks will help us better understand the underlying mechanisms of cellular functions. Numerous computational algorithms have been designed to identify functional modules automatically in the past decades. However, most community detection methods (non‐overlapping or overlapping types) are unsupervised models, which cannot incorporate the well‐known protein complexes as a priori. The authors propose a novel semi‐supervised model named pairwise constrains nonnegative matrix tri‐factorisation (PCNMTF), which takes full advantage of the well‐known protein complexes to find overlapping functional modules based on protein module indicator matrix and module correlation matrix simultaneously from PPI networks. PCNMTF determinately models and learns the mixed module memberships of each protein by considering the correlation among modules simultaneously based on the non‐negative matrix tri‐factorisation. The experiment results on both synthetic and real‐world biological networks demonstrate that PCNMTF gains more precise functional modules than that of state‐of‐the‐art methods.Inspec keywords: proteins, molecular biophysics, cellular biophysics, matrix algebraOther keywords: overlapping functional module detection, PPI network, pair‐wise constrained nonnegative matrix trifactorisation, protein–protein interaction data, cellular functions, protein complexes, real‐world biological networks, synthetic biological networks     

Honey‐incorporated nanofibre reduces replicative senescence of umbilical cord‐derived mesenchymal stem cells

Umbilical cord‐derived mesenchymal stem cells (UCDMSC) are attractive candidates for cell‐based regenerative medicine. However, they are susceptible to replicative senescence during repetitive passaging for in‐vitro expansion and induced senescence in an oxidative, inflammatory microenvironment in vivo. Aim of this study is to investigate if honey‐incorporated matrices can be employed to reduce senescence of UCDMSC. Matrices were prepared by electrospinning solutions of honey with poly‐vinyl alcohol (PVA). PVA:honey matrices exhibited free radical scavenging activity. Culture of UCDMSC on PVA:honey matrices showed improvement in cell proliferation compared to pure PVA nanofibres. Expression of vimentin indicated that mesenchymal phenotype is preserved after culturing on these matrices. Further, UCDMSC were serially subcultured and cells of two passages (P2 and P6) were evaluated for reactive oxygen species (ROS) load and senescence parameters. P6 cells showed a higher ROS load and β‐galactosidase (β‐gal) positive senescent cells compared to P2. However, culturing on PVA:honey substrates significantly reduced both ROS and β‐gal markers compared to cells on PVA substrates. Honey contains several antioxidant and anti‐inflammatory components, which can reduce the ROS‐related senescence. Thus, it is concluded that honey containing nanofibres can be effective substrates for stem cell‐based wound healing and regenerative medicine.Inspec keywords: molecular biophysics, nanofibres, nanomedicine, polymer fibres, cellular biophysics, nanofabrication, enzymes, biochemistry, electrospinning, wounds, biomedical materialsOther keywords: pure PVA nanofibres, UCDMSC, PVA:honey substrates, PVA substrates, ROS‐related senescence, honey containing nanofibres, stem cell‐based wound healing, honey‐incorporated nanofibre, replicative senescence, umbilical cord‐derived mesenchymal stem cells, cell‐based regenerative medicine, induced senescence, PVA:honey matrices, cell proliferation, honey‐incorporated matrices, electrospinning solutions, poly‐vinyl alcohol, free radical scavenging activity, vimentin expression, mesenchymal phenotype, reactive oxygen species load, senescence parameters, P6 cells, β‐galactosidase positive senescent cells, β‐gal markers, antiinflammatory components, antioxidant components     

Excluded volume effects in on‐ and off‐lattice reaction–diffusion models

Mathematical models are important tools to study the excluded volume effects on reaction–diffusion systems, which are known to play an important role inside living cells. Detailed microscopic simulations with off‐lattice Brownian dynamics become computationally expensive in crowded environments. In this study, the authors therefore investigate to which extent on‐lattice approximations, the so‐called cellular automata models, can be used to simulate reactions and diffusion in the presence of crowding molecules. They show that the diffusion is most severely slowed down in the off‐lattice model, since randomly distributed obstacles effectively exclude more volume than those ordered on an artificial grid. Crowded reaction rates can be both increased and decreased by the grid structure and it proves important to model the molecules with realistic sizes when excluded volume is taken into account. The grid artefacts increase with increasing crowder density and they conclude that the computationally more efficient on‐lattice simulations are accurate approximations only for low crowder densities.Inspec keywords: reaction‐diffusion systems, cellular biophysics, biodiffusion, Brownian motion, cellular automata, molecular biophysics, molecular configurationsOther keywords: crowder density, grid artefacts, grid structure, crowded reaction rates, artificial grid, randomly distributed obstacles, crowding molecules, cellular automata models, on‐lattice approximations, crowded environments, off‐lattice Brownian dynamics, detailed microscopic simulations, living cells, mathematical models, off‐lattice reaction‐diffusion models, on‐lattice reaction‐diffusion models, excluded volume effects     

Polyethylenimine‐modified curcumin‐loaded mesoporus silica nanoparticle (MCM‐41) induces cell death in MCF‐7 cell line

Breast cancer accounts for the first highest mortality rate in India and second in world. Though current treatment strategies are effectively killing cancer cells, they also end in causing severe side effects and drug resistance. Curcumin is a nutraceutical with multipotent activity but its insolubility in water limits its therapeutic potential as an anti‐cancer drug. The hydrophilicity of curcumin could be increased by nanoformulation or changing its functional groups. In this study, curcumin is loaded on mesoporous silica nanoparticle and its anti‐cancer activity is elucidated with MCF‐7 cell death. Structural characteristics of Mobil Composition of Matter ‐ 41(MCM‐41) as determined by high‐resolution transmission electron microscopy (HR‐TEM) shows that MCM‐41 size ranges from 100 to 200 nm diameters with pore size 2–10 nm for drug adsorption. The authors found 80–90% of curcumin is loaded on MCM‐41 and curcumin is released efficiently at pH 3.0. The 50 µM curcumin‐loaded MCM‐41 induced 50% mortality of MCF‐7 cells. Altogether, their results suggested that increased curcumin loading and sustained release from MCM‐41 effectively decreased cell survival of MCF‐7 cells in vitro.Inspec keywords: cancer, cellular biophysics, nanoparticles, nanomedicine, biomedical materials, polymers, mesoporous materials, transmission electron microscopy, drugs, adsorptionOther keywords: polyethylenimine‐modified curcumin‐loaded mesoporus silica nanoparticle, MCF‐7 cell line, breast cancer, cancer cells, drug resistance, multipotent activity, therapeutic potential, anticancer drug, mesoporous silica nanoparticle, MCF‐7 cell death, high‐resolution transmission electron microscopy, drug adsorption, curcumin‐loaded MCM‐41, nutraceutical curcumin, size 2 nm to 10 nm, size 100 nm to 200 nm     

Small RNA‐mediated switch‐like regulation in bacterial quorum sensing

Quorum sensing (QS) is a signalling mechanism by which bacteria produce, release and then detect and respond to changes in their density and biosignals called autoinducers (AIs). There are multiple feedback loops in the QS system of Vibrio harveyi. However, how these feedback loops function to control signal processing remains unclear. In this study, the authors present a computational model for the switch‐like regulation of signal transduction by small regulatory RNA‐mediated QS based on intertwined network involving AIs, LuxO, LuxU, Qrr sRNAs and LuxR. In agreement with experimental observations, the model suggests that different feedbacks play critical roles in the switch‐like regulation. The authors results reveal that V. harveyi uses multiple feedbacks to precisely control signal transduction.Inspec keywords: biocommunications, biocontrol, biology computing, cellular biophysics, physiological models, RNAOther keywords: RNA‐mediated switch‐like regulation, bacterial quorum sensing, signaling mechanism, autoinducers, Vibrio harveyi, feedback loops function, signal processing control, switch‐like regulation     

In‐vitro and in‐vivo evaluation of chitosan‐based thermosensitive gel containing lorazepam NLCs for the treatment of status epilepticus

The objective of this study was to develop an in‐situ gel containing lorazepam (LZM) loaded nanostructured lipid carriers (NLCs) for direct nose‐to‐brain delivery in order to increase drug therapeutic efficacy in the treatment of epilepsy. Accordingly, LZM loaded NLCs were formulated using emulsification solvent diffusion and evaporation method; then the effects of the formulation variables on different physicochemical characteristics of NLCs were investigated. Thermosensitive in‐situ gels containing LZM‐NLCs were prepared using a combination of chitosan and β‐glycerol phosphate (β‐GP). The anticonvulsant efficacy of LZM‐NLCs‐Gel was then examined using the pentylenetetrazole (PTZ) model. The optimised NLCs were spherical, showing the particle size of 71.70 ± 5.16 nm and the zeta potential of −20.06 ± 2.70 mV. The pH and gelation time for the chitosan solution with 15% (w/v) β‐GP were determined to be 7.12 ± 0.03 and 5.33 ± 0.58 min, respectively. The in‐vivo findings showed that compared with the control group and the group that received LZM‐Gel, the occurrence of PTZ‐induced seizures in the rats was significantly reduced by LZM‐NLCs‐Gel after intranasal administration. These results, therefore, suggested that the LZM‐NLCs‐Gel system could have potential applications for brain targeting through nasal route and might increase LZM therapeutic efficacy in the treatment of epilepsy.Inspec keywords: biomedical materials, nanomedicine, cellular biophysics, electrokinetic effects, drug delivery systems, nanoparticles, brain, pH, drugs, particle size, nanofabrication, medical disorders, polymer gelsOther keywords: evaporation method, β‐glycerol phosphate, β‐GP, optimised NLCs, received LZM‐Gel, LZM therapeutic efficacy, chitosan‐based thermosensitive gel, lorazepam NLCs, nose‐to‐brain delivery, drug therapeutic efficacy, emulsification solvent diffusion, in‐vivo evaluation, in‐vitro evaluation, LZM‐NLC‐gel system, status epilepticus treatment, lorazepam loaded nanostructured lipid carriers, epilepsy treatment, physicochemical characteristics, thermosensitive in‐situ gel, anticonvulsant efficacy, pentylenetetrazole model, particle size, zeta potential, pH, gelation time, chitosan solution, PTZ‐induced seizures, intranasal administration     

Co‐condensation synthesis of well‐defined mesoporous silica nanoparticles: effect of surface chemical modification on plasmid DNA condensation and transfection

Chemically modified mesoporous silica nanoparticles (MSNs) are of interest due to their chemical and thermal stability with adjustable morphology and porosity; therefore, it was aimed to develop and compare the MCM‐41 MSNs functionalised with imidazole groups (MCM‐41‐Im) to unmodified (MCM‐41‐OH) and primary amine functionalised (MCM‐41‐NH₂) MSNs for experimental gene delivery. The results show efficient transfection of the complexes of the plasmid and either MCM‐41‐NH₂ or MCM‐41‐Im. Furthermore, following transfection of HeLa cells using MCM‐41‐Im, an enhanced GFP expression was achieved consistent with the noticeable DNase1 protection and endosomal escape properties of MCM‐41‐Im using carboxyfluorescein tracer.Inspec keywords: condensation, mesoporous materials, silicon compounds, nanoparticles, DNA, surface chemistry, porosity, gene therapy, cellular biophysics, biomedical materials, nanomedicine, nanofabrication, molecular biophysics, biochemistryOther keywords: co‐condensation synthesis, surface chemical modification, plasmid DNA condensation, plasmid DNA transfection, chemical modified mesoporous silica nanoparticles, chemical stability, thermal stability, adjustable morphology, porosity, MCM‐41 MSN functionalisation, imidazole groups, MCM‐41‐OH, primary amine functionalised MSN, gene delivery, HeLa cell transfection, GFP expression, DNase1 protection, endosomal escape properties, carboxyfluorescein tracer, SiO₂      

Controllable synthesis and characterisation of palladium (II) anticancer complex‐loaded colloidal gelatin nanoparticles as a novel sustained‐release delivery system in cancer therapy

Over the past few years, there have been several attempts to deliver anticancer drugs into the body. It has been shown that compared to other available carriers, colloidal gelatin nanoparticles (CGNPs) have distinct properties due to their exceptional physico‐chemical and biological characteristics. In this study, a novel water‐soluble palladium (II) anticancer complex was first synthesised, and then loaded into CGNPs. The CGNPs were synthesised through a two‐step desolvation method with an average particle size of 378 nm. After confirming the stability of the drug in the nanoparticles, the drug‐loaded CGNPs were tested for in vitro cytotoxicity against human breast cancer cells. The results showed that the average drug encapsulating efficiency and drug loading of CGNPs were 64 and 10 ± 2.1% (w/w), respectively. There was a slight shift to higher values of cumulative release, when the samples were tested in lower pH values. In addition, the in vitro cytotoxicity test indicated that the number of growing cells significantly decreased after 48 h in the presence of different concentrations of drug. The results also demonstrated that the released drug could bind to DNA by a static mechanism at low concentrations (0.57 µM) on the basis of hydrophobic and hydrogen binding interactions.Inspec keywords: cancer, drug delivery systems, drugs, palladium compounds, colloids, gelatin, nanoparticles, nanomedicine, biomedical materials, nanofabrication, nanocomposites, molecular biophysics, molecular configurations, pH, solubility, particle size, cellular biophysics, encapsulation, DNA, hydrophobicity, hydrogen bondsOther keywords: controllable synthesis, sustained‐release delivery system, cancer therapy, palladium (II) anticancer complex‐loaded colloidal gelatin nanoparticles, anticancer drug delivery, physicochemical characteristics, biological characteristics, therapeutic pathways, water‐soluble palladium (II) anticancer complex, two‐step desolvation method, particle size, drug stability, gelatin matrix, drug‐loaded CGNPs, in vitro cytotoxic activity, human breast cancer cells, average drug encapsulating efficiency, pH values, cell growth, drug concentrations, DNA, static mechanism, hydrophobic interaction, hydrogen binding interactions     

In situ synthesised TiO2 ‐chitosan‐chondroitin 4–sulphate nanocomposites for bone implant applications

The artificial materials for bone implant applications are gaining more importance in the recent years. The series titania‐chitosan‐chondroitin 4–sulphate nanocomposites of three different concentrations (2:1:x, where x ‐ 0.125, 0.25, 0.5) have been synthesised by in situ sol–gel method and characterised by various techniques. The particle size of the nanocomposites ranges from 30–50 nm. The bioactivity, swelling nature, and the antimicrobial nature of the nanocomposites were investigated. The swelling ability and bioactivity of the composites is significantly greater and they possess high zone of inhibition against the microorganisms such as Staphylococcus aureus and Escherichia coli. The cell viability of the nanocomposites were evaluated by using MG‐63 and observed the composites possess high cell viability at low concentration. The excellent bioactivity and biocompatibility makes these nanocomposites a promising biomaterial for bone implant applications.Inspec keywords: titanium compounds, filled polymers, nanocomposites, bone, orthopaedics, biomedical materials, sol‐gel processing, nanofabrication, particle size, swelling, microorganisms, cellular biophysics, nanomedicine, prostheticsOther keywords: in situ synthesised TiO₂ ‐chitosan‐chondroitin 4‐sulphate nanocomposites, bone implant applications, artificial materials, in situ sol‐gel method, particle size, swelling nature, antimicrobial nature, microorganisms, Staphylococcus aureus, Escherichia coli, cell viability, MG‐63, biomaterial, size 30 nm to 50 nm, TiO₂      

Fluorescein isothiocyanate‐dyed mesoporous silica nanoparticles for tracking antioxidant delivery

This study investigated the cellular uptake of fluorescein isothiocyanate‐labelled mesoporous silica nanoparticles (FITC‐MSNs), amine‐functionalised FITC‐MSNs (AP‐FITC‐MSNs) and their gallic acid (GA)‐loaded counterparts. Mesoporous silica nanoparticles were labelled with fluorescein isothiocyanate, functionalised by 3‐aminopropyltriethoxysilane (APTES) (AP‐FITC‐MSNs) and then loaded by GA. All nanoparticles were characterised by transmission electron microscopy (TEM), Fourier transform infrared spectroscopy, and X‐ray diffraction. The cytotoxicity of different concentrations of dyed nanoparticles was investigated using (3‐(4,5‐trihydroxybenzoic acid, dimethylthiazol‐2‐yl)‐2,5‐diphenyltetrazolium bromide) assay and flow cytometry. TEM images showed that the average particle sizes of FITC‐MSNs and AP‐FITC‐MSNs were about 100 and 110 nm, respectively. These nanoparticles were internalised by Caco‐2 cells, accumulated and dispersed into the cytoplasm, nucleus, and subcellular organelles. Nanoparticles containing GA clearly decreased the viability of cells. FITC‐MSNs showed no toxicity on Caco‐2 cells at concentrations of ≤50 µg/ml. Functionalisation of FITC‐MSNs using APTES decreased toxicity effects on the cells. It was found that FITC‐MSNs can be applied at low concentrations as a marker in the cells. In addition, AP‐FITC‐MSNs showed better biocompatibility with Caco‐2 cells than FITC‐MSNs, because of their positive surface charges.Inspec keywords: mesoporous materials, porosity, nanoparticles, dyes, silicon compounds, nanocomposites, nanofabrication, nanomedicine, cellular biophysics, molecular biophysics, biochemistry, transmission electron microscopy, Fourier transform infrared spectra, X‐ray diffraction, toxicology, particle size, biomedical materials, surface charging, cancerOther keywords: fluorescein isothiocyanate‐dyed mesoporous silica nanoparticles, antioxidant delivery tracking, cellular uptake, amine‐functionalised FITC‐MSNs, gallic acid‐loaded counterparts, 3‐aminopropyltriethoxysilane, transmission electron microscopy, TEM, Fourier transform infrared spectroscopy, X‐ray diffraction, cytotoxicity, dyed nanoparticles, (3‐(4,5‐trihydroxybenzoic acid‐dimethylthiazol‐2‐yl)‐2,5‐diphenyltetrazolium bromide) assay, flow cytometry, particle sizes, AP‐FITC‐MSNs, Caco‐2 cells, cytoplasm, subcellular organelles, cell viability, biocompatibility, positive surface charges, SiO₂      

Period–amplitude co‐variation in biomolecular oscillators

The period and amplitude of biomolecular oscillators are functionally important properties in multiple contexts. For a biomolecular oscillator, the overall constraints in how tuning of amplitude affects period, and vice versa, are generally unclear. Here, the authors investigate this co‐variation of the period and amplitude in mathematical models of biomolecular oscillators using both simulations and analytical approximations. The authors computed the amplitude–period co‐variation of 11 benchmark biomolecular oscillators as their parameters were individually varied around a nominal value, classifying the various co‐variation patterns such as a simultaneous increase/decrease in period and amplitude. Next, the authors repeated the classification using a power norm‐based amplitude metric, to account for the amplitudes of the many biomolecular species that may be part of the oscillations, finding largely similar trends. Finally, the authors calculate ‘scaling laws’ of period–amplitude co‐variation for a subset of these benchmark oscillators finding that as the approximated period increases, the upper bound of the amplitude increases, or reaches a constant value. Based on these results, the authors discuss the effect of different parameters on the type of period–amplitude co‐variation as well as the difficulty in achieving an oscillation with large amplitude and small period.Inspec keywords: molecular biophysics, oscillations, biology computing, circadian rhythmsOther keywords: period‐amplitude co‐variation, biomolecular oscillators, mathematical models, analytical approximations, co‐variation patterns, power norm‐based amplitude metric, scaling laws     

Antibacterial,anti‐inflammatory and antioxidant effects of acetyl‐11‐α‐keto‐β‐boswellic acid mediated silver nanoparticles in experimental murine mastitis

Mastitis is an important economic disease causing production losses in dairy industry. Antibiotics are becoming ineffective in controlling mastitis due to the emergence of resistant strains requiring the development of novel therapeutic agents. In this study, the authors present the phytochemical synthesis of silver nanoparticles (AgNPs) with acetyl‐11‐α‐keto‐β‐boswellic acid and evaluation of their activity in Staphylococcus aureus induced murine mastitis. Boswellic acid mediated AgNP (BANS) were oval, polydispersed (99.8 nm) with an minimum inhibitory concentration of 0.033 µg ml⁻¹ against S. aureus, inhibitory concentration (IC₅₀) of 30.04 µg ml⁻¹ on mouse splenocytes and safe at an in vivo acute oral dose of 3.5 mg kg⁻¹ in mice. Mastitis was induced in lactating mice by inoculating S. aureus (log₁₀ 5.60 cfu) and treated 6 h post‐inoculation with BANS (0.12 mg kg⁻¹, intramammary and intraperitoneal), and cefepime (1 mg kg⁻¹, intraperitoneal). S. aureus inoculated mice showed increased bacterial load, neutrophil infiltration in mammary glands and elevated C‐reactive protein (CRP) in serum. Oxidative stress was also observed with elevated malondialdehyde level, superoxide dismutase (SOD) and catalase (CAT) activities. BANS treatment significantly (P  < 0.05) reduced bacterial load, CRP, SOD, CAT activities and neutrophil infiltration in affected mammary glands. BANS could be a potential therapeutic agent for managing bovine mastitis.Inspec keywords: nanomedicine, nanoparticles, silver, antibacterial activity, drugs, diseases, enzymesOther keywords: antibacterial effects, antiinflammatory effects, antioxidant effects, acetyl‐11‐α‐keto‐β‐boswellic acid, mediated silver nanoparticles, experimental murine mastitis, economic disease, dairy industry, resistant strains, phytochemical synthesis, Staphylococcus aureus, minimum inhibitory concentration, inoculating S. aureus, neutrophil infiltration, mammary glands, elevated C‐reactive protein, superoxide dismutase, catalase, bovine mastitis, Ag     

Detecting small attractors of large Boolean networks by function‐reduction‐based strategy

Boolean networks (BNs) are widely used to model gene regulatory networks and to design therapeutic intervention strategies to affect the long‐term behaviour of systems. A central aim of Boolean‐network analysis is to find attractors that correspond to various cellular states, such as cell types or the stage of cell differentiation. This problem is NP‐hard and various algorithms have been used to tackle it with considerable success. The idea is that a singleton attractor corresponds to n consistent subsequences in the truth table. To find these subsequences, the authors gradually reduce the entire truth table of Boolean functions by extending a partial gene activity profile (GAP). Not only does this process delete inconsistent subsequences in truth tables, it also directly determines values for some nodes not extended, which means it can abandon the partial GAPs that cannot lead to an attractor as early as possible. The results of simulation show that the proposed algorithm can detect small attractors with length p = 4 in BNs of up to 200 nodes with average indegree K = 2.Inspec keywords: Boolean functions, genetics, cellular biophysicsOther keywords: detecting small attractors, function‐reduction‐based strategy, model gene regulatory networks, therapeutic intervention strategies, Boolean‐network analysis, cellular states, NP‐hard, singleton attractor, Boolean functions, partial gene activity profile, cell differentiation