Reusability of model components for environmental simulation – Case studies for integrated coastal zone management

Model constructs in environmental models are seldom reused beyond the project lifetime or in other modelling studies. A library of reusable model components could facilitate the maintenance of existing models and make the design of new models more efficient. Although component-based design is the common standard in software engineering and manufacturing few examples are yet found in environmental science. The multi-disciplinary project SPICOSA used a common, component-based simulation framework for environmental modelling, based on 18 case studies through Europe. The development of high-quality model components with potential for reuse turned out to be a challenge despite of the guidelines and tutorial examples provided. Well-designed components are of appropriate granularity, encapsulated, with a limited use of connectors and proper data handling. Ultimately, the success of a model library depends on a sufficient set of quality components with complementary functionalities, a framework for quality control, and support of the environmental modelling community.     

Simulating agricultural land rental markets by combining agent-based models with traditional economics concepts: The case of the Argentine Pampas

Land exchange through rental transactions is a central process in agricultural systems. The land tenure regimes emerge from land transactions and structural and land use changes are tied to the dynamics of the land market. We introduce LARMA, a LAnd Rental MArket model embedded within the Pampas Model (PM), an agent-based model of Argentinean agricultural systems. LARMA produces endogenous formation of land rental prices. LARMA relies on traditional economic concepts for LRP formation but addresses some drawbacks of this approach by being integrated into an agent-based model that considers heterogeneous agents interacting with one another. PM-LARMA successfully reproduced the agricultural land tenure regimes and land rental prices observed in the Pampas. Including adaptive, heterogeneous and interacting agents was critical to this success. We conclude that agent-based and traditional economic models can be successfully combined to capture complex emergent land tenure and market price patterns while simplifying the overall model design.     

Advancements in the design and validation of an air pollution integrated assessment model for Spain

This paper describes the design and application of the Atmospheric Evaluation and Research Integrated model for Spain (AERIS). Currently, AERIS can provide concentration profiles of NO₂, O₃, SO₂, NH₃, PM, as a response to emission variations of relevant sectors in Spain. Results are calculated using transfer matrices based on an air quality modelling system (AQMS) composed by the WRF (meteorology), SMOKE (emissions) and CMAQ (atmospheric-chemical processes) models. The AERIS outputs were statistically tested against the conventional AQMS and observations, revealing a good agreement in both cases. At the moment, integrated assessment in AERIS focuses only on the link between emissions and concentrations. The quantification of deposition, impacts (health, ecosystems) and costs will be introduced in the future. In conclusion, the main asset of AERIS is its accuracy in predicting air quality outcomes for different scenarios through a simple yet robust modelling framework, avoiding complex programming and long computing times.     

A comprehensive approach to evaluating watershed models for predicting river flow regimes critical to downstream ecosystem services

Selection of strategies that help reduce riverine inputs requires numerical models that accurately quantify hydrologic processes. While numerous models exist, information on how to evaluate and select the most robust models is limited. Toward this end, we developed a comprehensive approach that helps evaluate watershed models in their ability to simulate flow regimes critical to downstream ecosystem services. We demonstrated the method using the Soil and Water Assessment Tool (SWAT), the Hydrological Simulation Program–FORTRAN (HSPF) model, and Distributed Large Basin Runoff Model (DLBRM) applied to the Maumee River Basin (USA). The approach helped in identifying that each model simulated flows within acceptable ranges. However, each was limited in its ability to simulate flows triggered by extreme weather events, owing to algorithms not being optimized for such events and mismatched physiographic watershed conditions. Ultimately, we found HSPF to best predict river flow, whereas SWAT offered the most flexibility for evaluating agricultural management practices.     

Software framework for inverse modeling and uncertainty characterization

Estimation of spatial random fields (SRFs) is required for predicting groundwater flow, subsurface contaminant movement, and other areas of environmental and earth sciences modeling. This paper presents an inverse modeling framework called MAD# for characterizing SRFs, which is an implementation of the Bayesian inverse modeling technique Method of Anchored Distributions (MAD). MAD# allows modelers to “wrap” simulation models using an extensible driver architecture that exposes model parameters to the inversion engine. MAD# is implemented in an open source software package with the goal of lowering the barrier to using inverse modeling in education, research, and resource management. MAD# includes an intentionally simple user interface for simulation configuration, external software integration, spatial domain and model output visualization, and evaluation of model convergence. Four test cases are presented demonstrating the novel functionality of this framework to apply inversion in order to calibrate the model parameters characterizing a groundwater aquifer.     

A data porting tool for coupling models with different discretization needs

The presented work is part of a larger research program dealing with developing tools for coupling biogeochemical models in contaminated landscapes. The specific objective of this article is to provide researchers with a data porting tool to build hexagonal raster using information from a rectangular raster data (e.g. GIS format). This tool involves a computational algorithm and an open source software (written in C). The method of extending the reticulated functions defined on 2D networks is an essential key of this algorithm and can also be used for other purposes than data porting. The algorithm allows one to build the hexagonal raster with a cell size independent from the geometry of the rectangular raster. The extended function is a bi-cubic spline which can exactly reconstruct polynomials up to degree three in each variable. We validate the method by analyzing errors in some theoretical case studies followed by other studies with real terrain elevation data. We also introduce and briefly present an iterative water routing method and use it for validation on a case with concrete terrain data.     

Wastewater treatment modelling with smoothed particle hydrodynamics

In this paper a novel hydrodynamic wastewater treatment (WWT) model based on smoothed particle hydrodynamics (SPH) is presented. The hydraulics of the wastewater treatment plant is modelled in detail with SPH. The SPH solver is coupled to the activated sludge model such that the influence on biokinetic processes is described. The key innovation of the present WWT model is that both the biokinetics and the wastewater hydraulics are simultaneously solved for non-steady flows. After validating the present method against the software ASIM 5, the capabilities are demonstrated for a full-scale treatment plant simulation. We investigate the stirrer and aeration induced mixing within the reactor compartments as well as the resulting concentrations of the biokinetic compounds. Following the establishment of a local coupling between the hydraulics and the biokinetics, the biokinetic concentrations within a treatment plant can be spatially resolved with a high resolution.     

A methodological approach to the design of optimising control strategies for sewer systems

This study focuses on designing an optimisation based control for sewer system in a methodological way and linking it to a regulatory control. Optimisation based design is found to depend on proper choice of a model, formulation of objective function and tuning of optimisation parameters. Accordingly, two novel optimisation configurations are developed, where the optimisation either acts on the actuators or acts on the regulatory control layer. These two optimisation designs are evaluated on a sub-catchment of the sewer system in Copenhagen, and found to perform better than the existing control; a rule based expert system. On the other hand, compared with a regulatory control technique designed earlier in Mollerup et al. (2015), the optimisation showed similar performance with respect to minimising overflow volume. Hence for operation of small sewer systems, regulatory control strategies can offer promising potential and should be considered along more advanced strategies when identifying novel solutions.     

Potential of Bayesian networks for adaptive management in water recycling

Water recycling is an important solution to increasing water scarcity. However, universal wastewater treatment standards deter uptake of recycling schemes. Lack of data also impedes fit-for-purpose water recycling and water managers are challenged by decision making under uncertain conditions. Bayesian networks (BNs) are increasingly recognised as a valuable tool for decision making under uncertainty. In this study BNs are used to model health risks associated with wastewater irrigation of a public open space. Three BNs based on quantitative microbial risk assessment model risk reduction potential along a treatment chain and at the site of reuse. The BNs simulate multiple exposure profiles and scenarios, providing conditional probability of infection or illness, comparable with health-based targets. Study findings highlight the significant impact of post treatment risk mitigation, despite challenging conditions. BNs provide a transparent, defensible evidence base for mapping and quantifying risk pathways, comparing decision options and predicting outcomes of management policies.     

Defining limits to multiple and simultaneous anthropogenic stressors in a lake ecosystem – Lake Kinneret as a case study

In this study we expanded a recently developed approach for defining acceptable levels of management policy that will allow sustainable management of water quality in a lake ecosystem. A three dimensional solution space was created to define all acceptable scenarios of N loads, P loads and lake water level (WL) thus providing an integrated tool for defining the extent of measures that will allow lake ecosystem sustainability. The approach included use of a lake ecosystem model, a quantitative system of composite water quality indices (CWQIs) and defined sustainability criteria for the ecosystem. The approach was tested on the Lake Kinneret (Sea of Galilee) ecosystem and succeeded in defining the range of acceptable management policy through the use of long term simulations of different scenarios. Using the results of the scenarios, a number of polygons were created, defined as relative solution domain area (RSDA), which denote the permissible ranges of nutrient loads at different water levels. The polygon, and hence RSDA, boundaries represent critical values of nutrient loads allowing conservation of the lake water quality at each WL. By integrating all RSDA, a three dimensional solution space was created which defines all acceptable ranges of N loads, P loads and WL thus providing lake managers with an integrated tool for defining the extent of measures that will allow sustainability of the lake ecosystem. This novel approach is unique, and presents an example of implementation of a management tool that integrates an ecosystem model, multiple stressors and quantified water quality indices to determine limits of management actions. This approach may well be implemented to other lakes around the world suffering from water quality deterioration as a result of changes in water level and nutrients loads.     

Double-model adaptive fault detection and diagnosis applied to real flight data

The existing multiple model-based estimation algorithms for Fault Detection and Diagnosis (FDD) require the design of a model set, which contains a number of models matching different fault scenarios. To cope with partial faults or simultaneous faults, the model set can be even larger. A large model set makes the computational load intensive and can lead to performance deterioration of the algorithms. In this paper, a novel Double-Model Adaptive Estimation (DMAE) approach for output FDD is proposed, which reduces the number of models to only two, even for the FDD of partial and simultaneous output faults. Two Selective-Reinitialization (SR) algorithms are proposed which can both guarantee the FDD performance of the DMAE. The performance is tested using a simulated aircraft model with the objective of Air Data Sensors (ADS) FDD. Another contribution is that the ADS FDD using real flight data is addressed. Issues related to the FDD using real flight test data are identified. The proposed approaches are validated using real flight data of the Cessna Citation II aircraft, which verified their effectiveness in practice.     

Global parameter optimization for biokinetic modeling of simple batch experiments

Environmental process modeling is challenged by the lack of high quality data, stochastic variations, and nonlinear behavior. Conventionally, parameter optimization is based on stochastic sampling techniques to deal with the nonlinear behavior of the proposed models. Despite widespread use, such tools cannot guarantee globally optimal parameter estimates. It can be especially difficult in practice to differentiate between lack of algorithm convergence, convergence to a non-global local optimum, and model structure deficits. For this reason, we use a deterministic global optimization algorithm for kinetic model identification and demonstrate it with a model describing a typical batch experiment. A combination of interval arithmetic, reformulations, and relaxations allows globally optimal identification of all (six) model parameters. In addition, the results suggest that further improvements may be obtained by modification of the optimization problem or by proof of the hypothesized pseudo-convex nature of the problem suggested by our results.     

A framework for coupling explanation and prediction in hydroecological modelling

Causal explanation and empirical prediction are usually addressed separately when modelling ecological systems. This potentially leads to erroneous conflation of model explanatory and predictive power, to predictive models that lack ecological interpretability, or to limited feedback between predictive modelling and theory development. These are fundamental challenges to appropriate statistical and scientific use of ecological models. To help address such challenges, we propose a novel, integrated modelling framework which couples explanatory modelling for causal understanding and input variable selection with a machine learning approach for empirical prediction. Exemplar datasets from the field of freshwater ecology are used to develop and evaluate the framework, based on 267 stream and river monitoring stations across England, UK. These data describe spatial patterns in benthic macroinvertebrate community indices that are hypothesised to be driven by meso-scale physical and chemical habitat conditions. Whilst explanatory models developed using structural equation modelling performed strongly (r² for two macroinvertebrate indices = 0.64–0.70), predictive models based on extremely randomised trees demonstrated moderate performance (r² for the same indices = 0.50–0.61). However, through coupling explanatory and predictive components, our proposed framework yields ecologically-interpretable predictive models which also maintain the parsimony and accuracy of models based on solely predictive approaches. This significantly enhances the opportunity for feedback among causal theory, empirical data and prediction within environmental modelling.     

Effect of handle design on movement dynamics and muscle co-activation in a wrist flexion task

Arm and wrist manipulanda are commonly used as input devices in teleoperation and gaming applications, establish a physical interface to patients in several rehabilitation robots, and are applied as advanced research tools in biomechanics and neuroscience. Despite the fact that the physical interface, i.e. the handle through which the wrist/hand is attached to the manipulator, may influence interaction and movement behavior, the effects of handle design on these parameters has received little attention. Yet, a poor handle design might lead to overexertion and altered movement dynamics, or result in misinterpretation of results in research studies. In this study, twelve healthy subjects performed repetitions of a wrist flexion task against a dynamic load generated by a 1-DOF robotic wrist manipulandum. Three different handle designs were qualitatively and quantitatively evaluated based on wrist movement kinematics and dynamics, patterns of finger and wrist muscle activity, and ergonomics criteria such as perceived comfort and fatigue. The three proposed designs were further compared to a conventional joystick-like handle. Task performance as well as kinematic and kinetic parameters were found to be unaffected by handle design. Nevertheless, differences were found in perceived task difficulty, comfort and levels of muscle activation of wrist and finger muscles, with significantly higher muscle activation when using a joystick-like design, where the handle is completely enclosed by the hand. Comfort was rated high for the flat handle, adapted to the natural curvature of the hand with the fingers extended. These results may inform for the design of handles serving as physical interface in teleoperation applications, robot-assisted rehabilitation and biomechanics/neuroscience research.     

Effect of body-borne equipment on injury of military pilots and aircrew during a simulated helicopter crash

Military helicopter pilots are expected to wear a variety of items of body-borne equipment during flight so as to be prepared for any situation that may arise in combat. Helicopter seats are designed to a specified weight range for an occupant with equipment. This paper investigates how distributing the equipment on the body affects injury potential during a helicopter crash. A finite element model representing a helicopter seat with a fully deformable 50th percentile Hybrid III carrying equipment was developed. The model was subjected to a standard military certification crash test. Various equipment configurations were investigated and analysed to determine its influence on the risk of injury. It was found that placing the equipment low on the torso, i.e. near the thighs, not only reduces the likelihood of injury in the lumbar, spinal region but also provides favourable results in neck and head injury risk when compared to other configurations investigated. In contrast, placing equipment high on the torso, i.e. close to the chin, increases the lumbar load and implicitly, the risk of head injury. A statistical analysis is carried out using the Wilcoxon Signed Rank Test to deliver probability of loads experienced within a certain interval. This study recommends an equipment configuration that improves survivability for an occupant seated on a fixed load energy absorbing seat which is subjected to Military Standard 58095A Test 4.     

A new method for trust and reputation evaluation in the cloud environments using the recommendations of opinion leaders' entities and removing the effect of troll entities

Trust in the cloud environment is not written into an agreement and is something earned. In any trust evaluation mechanism, opinion leaders are the entities influencing the behaviors or attitudes of others, this makes them to be trustworthy, valid among other characteristics. On the other hand, trolls are the entities posting incorrect and unreal comments; therefore, their effect must be removed. This paper evaluates the trust by considering the influence of opinion leaders on other entities and removing the troll entities’ effect in the cloud environment. Trust value is evaluated using five parameters; availability, reliability, data integrity, identity and capability. Also, we propose a method for opinion leaders and troll entity identification using three topological metrics, including input-degree, output-degree and reputation measures. The method being evaluated in various situation where shows the results of accuracy by removing the effect of troll entities and the advice of opinion leaders.     

Agro-ecosystem modeling can aid in the optimization of biomass feedstock supply

Recent European Directives promoted the development of biofuels, requesting mandatory limits to their emissions ot greenhouse gases (GHG). Second-generation biofuels based on lignocellulosic biomass are prime candidates but their GHG emissions are variable and uncertain. Agro-ecosystem modeling can capture them and the performance of biofuel feedstocks.This study aimed at optimizing feedstock supply for a bioethanol unit in France, from agricultural residues, annual and perennial crops. Their productivity and environmental impacts were modelled on a regional scale using geo-referenced data on soil properties, crop management, land-use and future weather data. Several supply scenarios were tested. Cereal straw was the most efficient feedstock but had a low availability, and only miscanthus could meet the bioethanol plant's demand. Sorghum combined poor yields and high GHG emissions compared by miscanthus and triticale. A mix of three biomass sources used less than 3% of the regional agricultural land while abating GHG emissions by 60%.     

Use of freely available datasets and machine learning methods in predicting deforestation

The range and quality of freely available geo-referenced datasets is increasing. We evaluate the usefulness of free datasets for deforestation prediction by comparing generalised linear models and generalised linear mixed models (GLMMs) with a variety of machine learning models (Bayesian networks, artificial neural networks and Gaussian processes) across two study regions. Freely available datasets were able to generate plausible risk maps of deforestation using all techniques for study zones in both Mexico and Madagascar. Artificial neural networks outperformed GLMMs in the Madagascan (average AUC 0.83 vs 0.80), but not the Mexican study zone (average AUC 0.81 vs 0.89). In Mexico and Madagascar, Gaussian processes (average AUC 0.89, 0.85) and structured Bayesian networks (average AUC 0.88, 0.82) performed at least as well as GLMMs (average AUC 0.89, 0.80). Bayesian networks produced more stable results across different sampling methods. Gaussian processes performed well (average AUC 0.85) with fewer predictor variables.     

Automated 3D volumetric reconstruction of multiple-room building interiors for as-built BIM

Currently, fully automated as-built modeling of building interiors using point-cloud data still remains an open challenge, due to several problems that repeatedly arise: (1) complex indoor environments containing multiple rooms; (2) time-consuming and labor-intensive noise filtering; (3) difficulties of representation of volumetric and detail-rich objects such as windows and doors. This study aimed to overcome such limitations while improving the amount of details reproduced within the model for further utilization in BIM. First, we input just the registered three-dimensional (3D) point-cloud data and segmented the point cloud into separate rooms for more effective performance of the later modeling phases for each room. For noise filtering, an offset space from the ceiling height was used to determine whether the scan points belonged to clutter or architectural components. The filtered points were projected onto a binary map in order to trace the floor-wall boundary, which was further refined through subsequent segmentation and regularization procedures. Then, the wall volumes were estimated in two ways: inside- and outside-wall-component modeling. Finally, the wall points were segmented and projected onto an inverse binary map, thereby enabling detection and modeling of the hollow areas as windows or doors. The experimental results on two real-world data sets demonstrated, through comparison with manually-generated models, the effectiveness of our approach: the calculated RMSEs of the two resulting models were 0.089 m and 0.074 m, respectively.