Long-optical-path scanning mechanism for optical coherence tomography

A new scanning mechanism for changing long optical paths is proposed. This mechanism consists of corner reflectors arranged equally upon a disk and an outer mirror. Rotating the 120-mm disk causes a long-optical-path change in each reflector with a near linearity of more than 40 mm. An optical coherence tomography system is described that confirms the usefulness of the proposed mechanism. Its operating characteristics and accuracy are evaluated by analysis and experiment. The deviation of the optical-path change is less than 1.52% at a reflector rotation angle of +/-10 degrees. A high-speed lock-in amplifier is utilized for fundamental measurements of glass samples.     

Matrix approach to quantitative refractive index analysis by Fourier domain optical coherence tomography

The rapid development in the field of optical coherence tomography has demanded increasingly sophisticated numerical models to enable the interpretation of image data and extract quantitative results. We use a matrix formulation of Fresnel's equations for multilayered media to extract layer-dependent thickness and refractive index directly from Fourier domain optical coherence tomography spectrograms. An eigenanalysis spectral decomposition approach is used to constrain the least squares fitting algorithm, avoiding the need for initial estimates of the parameter values. We demonstrate this novel quantitative analysis approach by using a multilayered phantom and show good agreement with the known layer parameter values. This approach introduces a powerful tool for the analysis of layer-dependent optical properties that could have an important role in the differentiation of healthy and diseased tissue.     

Performance and scalability of Fourier domain optical coherence tomography acceleration using graphics processing units

Fourier domain optical coherence tomography (FD-OCT) provides faster line rates, better resolution, and higher sensitivity for noninvasive, in vivo biomedical imaging compared to traditional time domain OCT (TD-OCT). However, because the signal processing for FD-OCT is computationally intensive, real-time FD-OCT applications demand powerful computing platforms to deliver acceptable performance. Graphics processing units (GPUs) have been used as coprocessors to accelerate FD-OCT by leveraging their relatively simple programming model to exploit thread-level parallelism. Unfortunately, GPUs do not "share" memory with their host processors, requiring additional data transfers between the GPU and CPU. In this paper, we implement a complete FD-OCT accelerator on a consumer grade GPU/CPU platform. Our data acquisition system uses spectrometer-based detection and a dual-arm interferometer topology with numerical dispersion compensation for retinal imaging. We demonstrate that the maximum line rate is dictated by the memory transfer time and not the processing time due to the GPU platform's memory model. Finally, we discuss how the performance trends of GPU-based accelerators compare to the expected future requirements of FD-OCT data rates.     

Quantitatively characterizing fluctuations of dielectric susceptibility of tissue with Fourier domain optical coherence tomography

A new model of Fourier domain optical coherence tomography (FDOCT) is proposed, valid within the first Born approximation, which takes the fluctuations of the dielectric susceptibility of tissue into account. It is shown that the spectral electrical power at the detector in the FDOCT system is proportional to the Fourier component of the spatial correlation function of the dielectric susceptibility of the tissue, proportional to the squares of the spectrum of the incident light field and the amplitude reflectance of the reference mirror. One possible application of the obtained result is to use the measured spectral data of the spatial correlation function of the dielectric susceptibility to quantitatively characterize properties of tissue.     

3x3 Mach-Zehnder interferometer with unbalanced differential detection for full-range swept-source optical coherence tomography

Quadrature interferometry based on 3x3 fiber couplers could be used to double the effective imaging depth in swept-source optical coherence tomography. This is due to its ability to suppress the complex conjugate artifact naturally. We present theoretical and experimental results for a 3x3 Mach-Zehnder interferometer using a new unbalanced differential optical detection method. The new interferometer provides simultaneous access to complementary phase components of the complex interferometric signal. No calculations by trigonometric relationships are needed. We demonstrate a complex conjugate artifact suppression of 27 dB obtained in swept-source optical coherence tomography using our unbalanced differential detection. We show that our unbalanced differential detection has increased the signal-to-noise ratio by at least 4 dB compared to the commonly used balanced detection technique. This is due to better utilization of optical power.     

Interferometer for optical coherence tomography

We describe a new interferometer setup for optical coherence tomography (OCT). The interferometer is based on a fiber arrangement similar to Young's two-pinhole interference experiment with spatial coherent and temporal incoherent light. Depth gating is achieved detection of the interference signal on a linear CCD array. Therefore no reference optical delay scanning is needed. The interference signal, the modulation of the signal, the axial resolution, and the depth range are derived theoretically and compared with experiments. The dynamic range of the setup is compared with OCT sensors in the time domain. To our knowledge, the first images of porcine brain and heart tissue and human skin are presented.     

Inverse scattering for optical coherence tomography

Inverse scattering theory for optical coherence tomography (OCT) is developed. The results are used to produce algorithms to resolve three-dimensional object structure, taking into account the finite beam width, diffraction, and defocusing effects. The resolution normally achieved only in the focal plane of the OCT system is shown to be available for all illuminated depths in the object without moving the focal plane. Spatially invariant resolution is verified with numerical simulations and indicates an improvement of the high-resolution cross-sectional imaging capabilities of OCT.     

Common-path interferometer for frequency-domain optical coherence tomography

A Michelson-type spectral interferometer that uses a common beam path for the reference and the sample arms is described. This optical arrangement is more compact and stable than the more commonly used dual-arm interferometer and is well suited for frequency-domain optical coherence tomography of biological samples. With a 16-bit CCD camera, the instrument has sufficient dynamic range and resolution for imaging to depths of 2 mm in scattering biological materials. Images obtained with this spectral interferometer are presented, including cross-sectional images in a Xenopus laevis tadpole.     

Image restoration method based on Hilbert transform for full-field optical coherence tomography

A full-field optical coherence tomography (FF-OCT) system utilizing a simple but novel image restoration method suitable for a high-speed system is demonstrated. An en-face image is retrieved from only two phase-shifted interference fringe images through using the mathematical Hilbert transform. With a thermal light source, a high-resolution FF-OCT system having axial and transverse resolutions of 1 and 2.2 microm, respectively, was implemented. The feasibility of the proposed scheme is confirmed by presenting the obtained en-face images of biological samples such as a piece of garlic and a gold beetle. The proposed method is robust to the error in the amount of the phase shift and does not leave residual fringes. The use of just two interference images and the strong immunity to phase errors provide great advantages in the imaging speed and the system design flexibility of a high-speed high-resolution FF-OCT system.     

Ultrahigh-resolution full-field optical coherence tomography

We have developed a white-light interference microscope for ultrahigh-resolution full-field optical coherence tomography of biological media. The experimental setup is based on a Linnik-type interferometer illuminated by a tungsten halogen lamp. En face tomographic images are calculated by a combination of interferometric images recorded by a high-speed CCD camera. Spatial resolution of 1.8 microm x 0.9 microm (transverse x axial) is achieved owing to the extremely short coherence length of the source, the compensation of dispersion mismatch in the interferometer arms, and the use of relatively high-numerical-aperture microscope objectives. A shot-noise-limited detection sensitivity of 90 dB is obtained in an acquisition time per image of 4 s. Subcellular-level images of plant, animal, and human tissues are presented.     

Parallel optical coherence tomography system

We present the design and procedures for implementing a parallel optical coherence tomography (POCT) imaging system that can be adapted to an endoscopic format. The POCT system consists of a single mode fiber (SMF) array with multiple reduced diameter (15 microm) SMFs in the sample arm with 15 microm center spacing between fibers. The size of the array determines the size of the transverse imaging field. Electronic scanning eliminates the need for mechanically scanning in the lateral direction. Experimental image data obtained with this system show the capability for parallel axial scan acquisition with lateral resolution comparable to mechanically scanned optical coherence tomography systems.     

Characterisation of scaffold architecture and tendons using optical coherence tomography and polarisation-sensitive optical coherence tomography

Scaffolds play an important role in the generation of functional tissues using tissue-engineering techniques. To generate highly organised tissue, scaffolds must have specific internal and external architectures. Here, optical coherence tomography (OCT) is exploited to characterise the architectures of various scaffolds, in particular scaffolds which have been fabricated to support the formation of uniaxially orientated collagen bundle for use in tendon tissue engineering. In parallel, a polarisation-sensitive OCT (PSOCT) has been built to assess the collagen fibre organisation in human tendon and monitor the growth of engineering tendon constructs online and non-destructively. The impact of mechanical stimuli on the modulation of tendon tissue formation and organisation was also assessed. It is shown that conventional OCT is capable of characterising scaffold architecture and the pore size, porosity or microchannel dimension can be determined quantitatively and qualitatively. PSOCT generated birefringence images of human tendon and demonstrated that low birefringence images, associated with fewer microstructural variations, correlated to the presence of scar tissue or degenerated tissue; whereas the tissue-engineered tendon exhibited lower degree of birefringence.     

Inverse scattering for frequency-scanned full-field optical coherence tomography

Full-field optical coherence tomography (OCT) is able to image an entire en face plane of scatterers simultaneously, but typically the focus is scanned through the volume to acquire three-dimensional structure. By solving the inverse scattering problem for full-field OCT, we show it is possible to computationally reconstruct a three-dimensional volume while the focus is fixed at one plane inside the sample. While a low-numerical-aperture (NA) OCT system can tolerate defocus because the depth of field is large, for high NA it is critical to correct for defocus. By deriving a solution to the inverse scattering problem for full-field OCT, we propose and simulate an algorithm that recovers object structure both inside and outside the depth of field, so that even for high NA the focus can be fixed at a particular plane within the sample without compromising resolution away from the focal plane.     

Inverse scattering for rotationally scanned optical coherence tomography

Optical coherence tomography of luminal structures, such as for intravascular or gastrointestinal imaging, is performed by using a fiber-optic catheter as a beam-delivery probe. The interrogating beam is scanned angularly by rotating the fiber around a fixed central axis. Because the beam is focused only at a fixed distance from the center of the fiber, only scatterers near this distance are resolved. We present a solution of the inverse scattering problem that provides an estimate of the susceptibility of the sample for an angularly scanned Gaussian beam focused at a fixed distance from the origin. This solution provides quantitatively meaningful reconstructions while also extending the volume of the sample that is resolvable by the instrument.     

Multiscan time-domain optical coherence tomography for retina imaging

A versatile time-domain optical coherence tomography system is presented that can generate cross-sectional images by using either transverse priority or depth priority scanning. This is made possible by using a transmissive scanning delay line compatible with balance detection operating at a speed similar to that of the transverse scanner used to scan the beam across the target. In vivo images from the retina are generated and shown using the same system switched to either transverse or depth priority scanning regime, by using the scanning delay line either in slow or fast scanning modes, respectively. A comparative analysis of different scanning regimes depending on image size to fit different areas to be imaged is presented. Safety thresholds due to the different continuous irradiation time per transverse pixel in different scanning regimes are also considered. We present the maximum exposure level for a variety of scanning procedures, employing either A scanning (depth priority) or T scanning (transverse priority) when generating cross-sectional images, en face images, or collecting 3D volumes.     

Polarization-sensitive optical coherence tomography for imaging human atherosclerosis

Polarization-sensitive optical coherence tomography (PS-OCT) combines the advantages of OCT with image contrast enhancement, which is based on its ability to detect phase retardation and the fast-axis angle. Both PS-OCT images and histopathology have demonstrated similar features that allowed differentiation of atherosclerotic structures (i.e., plaques) from normal tissue. Moreover, the picrosirius polarization method was used to confirm PS-OCT assessment of collagen in the fibrous cap of atherosclerotic plaques, and high-frequency (40 MHz) ultrasound images were used to identify calcium in the vessel wall. Our preliminary ex vivo investigation of human aortic specimens indicated that PS-OCT might help to identify atherosclerotic lesions.     

Speckle reduction in optical coherence tomography by adaptive total variation method

An adaptive total variation method based on the combination of speckle statistics and total variation restoration is proposed and developed for reducing speckle noise in optical coherence tomography (OCT) images. The statistical distribution of the speckle noise in OCT image is investigated and measured. With the measured parameters such as the mean value and variance of the speckle noise, the OCT image is restored by the adaptive total variation restoration method. The adaptive total variation restoration algorithm was applied to the OCT images of a volunteer’s hand skin, which showed effective speckle noise reduction and image quality improvement. For image quality comparison, the commonly used median filtering method was also applied to the same images to reduce the speckle noise. The measured results demonstrate the superior performance of the adaptive total variation restoration method in terms of image signal-to-noise ratio, equivalent number of looks, contrast-to-noise ratio, and mean square error.     

High-resolution frequency-domain second-harmonic optical coherence tomography

We used continuum generated in an 8.5 cm long fiber by a femtosecond Yb fiber laser to improve threefold the axial resolution of frequency domain second-harmonic optical coherence tomography (SH-OCT) to 12 microm. The acquisition time was shortened by more than 2 orders of magnitude compared to the time-domain SH-OCT. The system was applied to image biological tissue of fish scales, pig leg tendon, and rabbit eye sclera. Highly organized collagen fibrils can be visualized in the recorded images. Polarization dependence on the SH has been used to obtain polarization resolved images.     

线聚焦光学相干层析术的研究

提出了一种高速光学相干层析(OCT)成像技术方案。利用柱面镜的成像特性将传统OCT的点聚焦成像模式改变为线聚焦成像模式,从而降低二维OCT图像的扫描维数,达到提高成像速度的目的。利用ZEMAX光学软件对系统进行光线追迹获得光束经过柱面镜后的聚焦情况。随后采用635nm的激光光源和柱面镜构建了实验系统,实验结果很好地验证了光线追迹仿真结果。