BciC-Catalyzed C132-Demethoxycarbonylation of Metal Pheophorbide a Alkyl Esters

Bacteriochlorophyll c molecules self-aggregate to form large oligomers in the core part of chlorosomes, which are the main light-harvesting antenna systems of green photosynthetic bacteria. In the biosynthetic pathway of bacteriochlorophyll c, a BciC enzyme catalyzes the removal of the C13²-methoxycarbonyl group of chlorophyllide a, which possesses a free propionate residue at the C17-position and a magnesium ion as the central metal. The in vitro C13²-demethoxycarbonylations of chlorophyll a derivatives with various alkyl propionate residues and central metals were examined by using the BciC enzyme derived from one green sulfur bacteria species, Chlorobaculum tepidum. The BciC enzymatic reactions of zinc pheophorbide a alkyl esters were gradually suppressed with an increase of the alkyl chain length in the C17-propionate residue (from methyl to pentyl esters) and finally the hexyl ester became inactive for the BciC reaction. Although not only the zinc but also nickel and copper complexes were demethoxycarbonylated by the BciC enzyme, the reactions were largely dependent on the coordination ability of the central metals: Zn>Ni>Cu. The above substrate specificity indicates that the BciC enzyme would not bind directly to the carboxy group of chlorophyllide a, but would bind to its central magnesium to form the stereospecific complex of BciC with chlorophyllide a, giving pyrochlorophyllide a, which lacks the (13²R)-methoxycarbonyl group.     

Exploiting the Catalytic Diversity of Short‐Chain Dehydrogenases/Reductases: Versatile Enzymes from Plants with Extended Imine Substrate Scope

Numerous short‐chain dehydrogenases/reductases (SDRs) have found biocatalytic applications in C=O and C=C (enone) reduction. For NADPH‐dependent C=N reduction, imine reductases (IREDs) have primarily been investigated for extension of the substrate range. Here, we show that SDRs are also suitable for a broad range of imine reductions. The SDR noroxomaritidine reductase (NR) is involved in Amaryllidaceae alkaloid biosynthesis, serving as an enone reductase. We have characterized NR by using a set of typical imine substrates and established that the enzyme is active with all four tested imine compounds (up to 99 % conversion, up to 92 % ee). Remarkably, NR reduced two keto compounds as well, thus highlighting this enzyme family's versatility. Using NR as a template, we have identified an as yet unexplored SDR from the Amaryllidacea Zephyranthes treatiae with imine‐reducing activity (≤95 % ee). Our results encourage the future characterization of SDR family members as a means of discovering new imine‐reducing enzymes.     

Photoenzymatic Reduction of CC Double Bonds

A simplified procedure for cell‐free biocatalytic reductions of conjugated CC double bonds using old yellow enzymes (OYEs) is reported. Instead of indirectly regenerating YqjM (an OYE homologue from B. subtilis) or NemA (N‐ethylmaleimide reductase from E. coli) via regeneration of reduced nicotinamide cofactors, we demonstrate that direct regeneration of catalytically active reduced flavins is an efficient and convenient approach. Reducing equivalents are provided from simple sacrificial electron donors such as ethylenediaminetetraacetate (EDTA), formate, or phosphite via photocatalytic oxidation. This novel photoenzymatic reaction scheme was characterized. Up to 65% rates of the NADH‐driven reaction were obtained while preserving enantioselectivity. The chemoselectivity of the novel approach was exclusive. Even when using crude cell extracts as biocatalyst preparations, only CC bond reduction was observed while ketone and aldehyde groups remained unaltered. Overall, a simple and practical approach for photobiocatalytic reductions is presented.     

Stereoselective Reduction of 1‐O‐Isopropyloxygenipin Enhances Its Neuroprotective Activity in Neuronal Cells from Apoptosis Induced by Sodium Nitroprusside

Genipin is a Chinese herbal medicine with both neuroprotective and neuritogenic activity. Because of its unstable nature, efforts have been to develop more stable genipin derivatives with improved biological activities. Among the new compounds reported in the literature, (1R)‐isopropyloxygenipin (IPRG001) is a more stable but less active compound compared with the parent, genipin. Here, two new IPRG001 derivatives generated by stereoselective reduction of the C₆=C₇ double bond were synthesized. The 1R and 1S isomers of (4aS,7S,7aS)‐methyl‐7‐(hydroxymethyl)‐1‐isopropoxy‐1,4a,5,6,7,7a‐hexahydrocyclopenta[c]pyran‐4‐carboxylate ( CHR20 and CHR21 ) were shown to be very stable both in high‐glucose cell culture medium and in mice serum at 37 °C. Evaluation using an MTT assay and Hoechst staining showed that CHR20 and CHR21 promote the survival of rat adrenal pheochromocytoma (PC12) and retinal neuronal (RGC‐5) cells from injury induced by sodium nitroprusside (SNP). The neuroprotective effects of CHR20 and CHR21 were greater than both isomers of IPRG001, the parent compounds. These results indicate that reduction of 1‐O‐isopropyloxygenipin enhances its neuroprotective activity without affecting its stability.     

Unexpected NADPH Hydratase Activity in the Nitrile Reductase QueF from Escherichia coli

The nitrile reductase QueF catalyzes NADPH-dependent reduction of the nitrile group of preQ₀ (7-cyano-7-deazaguanine) into the primary amine of preQ₁ (7-aminomethyl-7-deazaguanine), a biologically unique reaction important in bacterial nucleoside biosynthesis. Here we have discovered that the QueF from Escherichia coli—its D197A and E89L variants in particular (apparent k_cat≈10⁻² min⁻¹)—also catalyze the slow hydration of the C5=C6 double bond of the dihydronicotinamide moiety of NADPH. The enzymatically C6-hydrated NADPH is a 3.5:1 mixture of R and S forms and rearranges spontaneously through anomeric epimerization (β→α) and cyclization at the tetrahydronicotinamide C6 and the ribosyl O2. NADH and 1-methyl- or 1-benzyl-1,4-dihydronicotinamide are not substrates of the enzymatic hydration. Mutagenesis results support a QueF hydratase mechanism, in which Cys190—the essential catalytic nucleophile for nitrile reduction—acts as the general acid for protonation at the dihydronicotinamide C5 of NADPH. Thus, the NADPH hydration in the presence of QueF bears mechanistic resemblance to the C=C double bond hydration in natural hydratases.     

Loop‐Grafted Old Yellow Enzymes in the Bienzymatic Cascade Reduction of Allylic Alcohols

The enzymatic reduction of C=C bonds in allylic alcohols with Old Yellow Enzymes represents a challenging task, due to insufficient activation through the hydroxy group. In our work, we coupled an alcohol dehydrogenase with three wild‐type ene reductases—namely nicotinamide‐dependent cyclohex‐2‐en‐1‐one reductase (NCR) from Zymomonas mobilis, OYE1 from Saccharomyces pastorianus and morphinone reductase (MR) from Pseudomonas putida M10—and four rationally designed β/α loop variants of NCR in the bienzymatic cascade hydrogenation of allylic alcohols. Remarkably, the wild type of NCR was not able to catalyse the cascade reaction whereas MR and OYE1 demonstrated high to excellent activities. Through the rational loop grafting of two intrinsic β/α surface loop regions near the entrance of the active site of NCR with the corresponding loops from OYE1 or MR we successfully transferred the cascade reduction activity from one family member to another. Further we observed that loop grafting revealed certain influences on the interaction with the nicotinamide cofactor.     

Stereodivergent Biocatalytic Formal Reduction of α-Angelica Lactone to (R)- and (S)-γ-Valerolactone in a One-Pot Cascade

The formal asymmetric and stereodivergent enzymatic reduction of α-angelica lactone to both enantiomers of γ-valerolactone was achieved in a one-pot cascade by uniting the promiscuous stereoselective isomerization activity of Old Yellow Enzymes with their native reductase activity. In addition to running the cascade with one enzyme for each catalytic step, a bifunctional isomerase-reductase biocatalyst was designed by fusing two Old Yellow Enzymes, thereby generating an unprecedented case of an artificial enzyme catalyzing the reduction of nonactivated C=C bonds to access (R)-valerolactone in overall 41 % conversion and up to 91 % ee. The enzyme BfOYE4 could be used as single biocatalyst for both steps and delivered (S)-valerolactone in up to 84 % ee and 41 % overall conversion. The reducing equivalents were provided by a nicotinamide recycling system based on formate and formate dehydrogenase, added in a second step. This enzymatic system provides an asymmetric route to valuable chiral building blocks from an abundant bio-based chemical.     

Crossing the Border: From Keto- to Imine Reduction in Short-Chain Dehydrogenases/Reductases

The family of NAD(P)H-dependent short-chain dehydrogenases/reductases (SDRs) comprises numerous biocatalysts capable of C=O or C=C reduction. The highly homologous noroxomaritidine reductase (NR) from Narcissus sp. aff. pseudonarcissus and Zt_SDR from Zephyranthes treatiae, however, are SDRs with an extended imine substrate scope. Comparison with a similar SDR from Asparagus officinalis (Ao_SDR) exhibiting keto-reducing activity, yet negligible imine-reducing capability, and mining the Short-Chain Dehydrogenase/Reductase Engineering Database indicated that NR and Zt_SDR possess a unique active-site composition among SDRs. Adapting the active site of Ao_SDR accordingly improved its imine-reducing capability. By applying the same strategy, an unrelated SDR from Methylobacterium sp. 77 (M77_SDR) with distinct keto-reducing activity was engineered into a promiscuous enzyme with imine-reducing activity, thereby confirming that the ability to reduce imines can be rationally introduced into members of the “classical” SDR enzyme family. Thus, members of the SDR family could be a promising starting point for protein approaches to generate new imine-reducing enzymes.     

Extended Catalytic Scope of a Well‐Known Enzyme: Asymmetric Reduction of Iminium Substrates by Glucose Dehydrogenase

NADP(H)‐dependent imine reductases (IREDs) are of interest in biocatalytic research due to their ability to generate chiral amines from imine/iminium substrates. In reaction protocols involving IREDs, glucose dehydrogenase (GDH) is generally used to regenerate the expensive cofactor NADPH by oxidation of d ‐glucose to gluconolactone. We have characterized different IREDs with regard to reduction of a set of bicyclic iminium compounds and have utilized ¹H NMR and GC analyses to determine degree of substrate conversion and product enantiomeric excess (ee). All IREDs reduced the tested iminium compounds to the corresponding chiral amines. Blank experiments without IREDs also showed substrate conversion, however, thus suggesting an iminium reductase activity of GDH. This unexpected observation was confirmed by additional experiments with GDHs of different origin. The reduction of C=N bonds with good levels of conversion (>50 %) and excellent enantioselectivity (up to >99 % ee) by GDH represents a promiscuous catalytic activity of this enzyme.     

Thermal stability and Kinetic Study of rigid and plasticized Poly(vinyl chloride)/Poly(methylmethacrylate) blends

The thermal stability and kinetic parameters for degradation of rigid and plasticized poly(vinyl chloride)/poly (methylmethacrylate) blends have been investigated by using nonisothermal thermogravimetry in a flowing atmosphere of air. For that purpose, blends of variable composition from 0 to 100 wt% were prepared in the presence (15, 30, and 50 wt%) and in the absence of di‐(‐2‐ethyl hexyl) phthalate as plasticizer. Measurements were carried out in the temperature range of 30–550°C and at various heating rates (5, 10, 20, and 40°C/min). The kinetic parameters (E_a and A) were determined by applying the integral Kissinger method. Results indicate that these parameters and the thermal stability of the blends are dependent on the blend composition and the amount of plasticizer present. J. VINYL ADDIT. TECHNOL., 21:102–110, 2015. © 2014 Society of Plastics Engineers     

Comparison of the Morphological Transforming Activities of Fjord-Region PAHs with Dibenzo[a,e]Pyrene and Benzo[a]Pyrene

The morphological transforming activities in mouse embryo C3H10T1/2CL8 (C3H10T1/2) cells were examined for six PAHs: benzo[c]chrysene (B[c]C); benzo[g]chrysene (B[g]C); benzo[c]phenanthrene (B[c]P); dibenzo[a, l]pyrene (DB[a, l]P); dibenzo[a,e]pyrene (DB[a,e]P) and benzo[a]pyrene (B[a]P). C3H10T1/2 cells treated with B[c]P or B[g]C at concentrations of 0–3 μg/ml did not produce any transformed Type II or III foci after 24 hr of exposure. Concurrent cytotoxicity was observed. Under the same conditions, B[a]P and B[c]C were active, with B[c]C approximately one-half the activity of B[a]P. However, after a 48-hr treatment, B[c]P and B[g]C gave significant activity measured as both foci/dish or the number of dishes exhibiting foci. After a 24-hr treatment, comparison of B[a]P with two dibenzopyrenes, DB[a, l]P and DB[a,e]P, gave activities in the order: DB[a, l]P > B[a]P > DB[a,e]P. After 48 hr of treatment, both B[a]P and DB[a,e]P had similar activities.     

Oxygen evolution in 30% KOH at 70°C on nickel anodically coated with CoOOH/Co3O4

The oxygen evolution reaction (OER) was investigated on polished pure nickel electrodes preanodized for 30 min in nonpurified 30 wt% KOH at 70°C prior to determinating the kinetic parameters of the OER. The electrolyte contained up to 0.8mm dissolved cobalt and the preanodization current,i _a, ranged from 0.05 to 5 A cm^–2. In the presence of dissolved cobalt, an anodic coating of CoOOH/Co₃O₄ is formed on the nickel substrate. The electrocatalytic activity increases asi _a or the concentration in dissolved cobalt is increased. With 0.4mm dissolved cobalt, the improved electrocatalytic activity is due to a linear increase in exchange current density through the charge associated with the reduction of the loading. The Tafel slope remains unaffected.     

Cloning and disruption of the yeast C-8 sterol isomerase gene

The yeastERG2 gene codes for the C-8 sterol isomerase, an enzyme required for the isomerization of the δ8 double bond to the δ7 position in ergosterol biosynthesis. TheERG2 gene was cloned by complementation of a C-8 sterol isomerase mutant strain (erg2). The complementing region of DNA required to restore ergosterol synthesis toerg2 was limited to a 1.0 kbStuI-BglII fragment. In order to determine whether theERG2 gene was essential for yeast viability, aLEU2 gene was inserted into theNdeI site (made blunt) of this 1.0 kb fragment. Transformation of a wild type diploid strain with theERG2 substituted DNA resulted in the generation of viable haploids containing theerg2 null allele (erg2–4∶∶Leu2). These results suggest that the C-8 sterol isomerase activity is not essential for yeast cell viability. This disruption represents the second ergosterol biosynthetic gene in the distal portion of the pathway to be disrupted without adversely affecting cell viability. Based on a paper presented at the Symposium on Plant and Fungal Sterols: Biosynthesis, Metabolism and Function, held at the AOCS Annual Meeting, Baltimore, MD, April 1990.     

Kinetic Analysis of Nonisothermal Reduction of Silica-Supported Nickel Catalyst Precursors in a Hydrogen Atmosphere

A series of silica-supported nickel catalyst precursors was synthesized with different SiO₂/Ni molar ratios. Reduction of Ni catalyst precursors with different SiO₂/Ni molar ratios under a hydrogen atmosphere was investigated at different heating rates. Kinetic parameters were determined using Kissinger–Akahira–Sunose isoconversional and invariant kinetic parameter methods. It was found that for all molar ratios, the apparent activation energy (E_a) is practically constant in the conversion range of 0.20 ≤ α ≤ 0.80. In the considered conversion range, following values of E_a were found: 134.5 kJ mol^?1 (SiO₂/Ni = 0.20), 139.6 kJ mol^?1 (SiO₂/Ni = 0.80), and 128.3 kJ mol^?1 (SiO₂/Ni = 1.15). It was established that the reduction of Ni catalyst precursors with different SiO₂/Ni molar ratios is a complex process and can be described by the ?esták–Berggren autocatalytic model. It was found that the reaction is more Langmuir–Hinshelwood type, as hydrogen dissociates rapidly on surface nuclei and the dissociated hydrogen reacts with the Ni–O active system. It was concluded that the reduction process proceeds through bulk nucleation, which is a dominant mechanism, where three-dimensional growth of crystals with polyhedron-like morphology exists. It was found that the Ni/Si ratio decreases after the reduction process. This has been explained by low Ni and higher Si surface concentrations. It has been disclosed that Ni dispersion decreases.     

Gelation of poly(vinyl alcohol) solutions at low temperatures (20 to −78°C) and properties of gels

The flow points of atactic poly(vinyl alcohol) (a-PVA) gels with H₂O/dimethyl sulfoxide (DMSO) = 90/10 (v/v) chilled at 20 to ?78°C for 24 h depended on the chilling temperature and were 0–30°C for gels with the initial polymer concentrations (C_i) of 2–5 g/dL, whereas those for H₂O/DMSO = 50/50 chilled at 0 to ?78°C were independent of the chilling temperature and were 70–75°C. Syneresis occurred after eight cycles of freezing (?24°C) and thawing (20°C) for a-PVA hydrogels at concentrations above C_i = 4 g/dL and two such cycles for syndiotacticity-rich PVA (s-PVA) hydrogels at concentrations above C_i = 1 g/dL. The extent of syneresis per one cycle for s-PVA hydrogels was higher than that for a-PVA hydrogels at the initial cycles. In the a-PVA hydrogels with an initial polymer concentration of ca. 30 g/dL, syneresis was expected not to occur even after 20 cycles. If all the free water in the gels is assumed to have transuded by syneresis after 20 cycles, the residual water is bound water and is estimated to be six water molecules per one vinyl alcohol monomer unit. © 1994 John Wiley & Sons, Inc.     

Reversible Carbon-Carbon Bond Cleavage of a 3-Vinyl-1-Cyclopropene by Rh(I). Molecular Structures of Two Sterically Crowded 1,2,3,5-η-Pentadienediyl Complexes of Rh(III)

1,2,3-Tri-tert-butyl-3-vinyl-1-cyclopropene 6a reacts with [RhCl(C₂H₄)]₂ to give the dimeric 1,2,3,5-η-pentadienediyl complex 7a . The cyclopentadienyl derivative of this complex, 8a , is obtained by reaction of 7a with T1(C₅H₅). Crystal structures of both 7a and 8a were determined: 7a ; orthorhombic, Pbcn, a = 28.136 (4) Å, b = 10.637 (2) Å, c = 12.154 (2) Å, V = 3637.6 (1.2) ų, and Z = 4 : 8a ; triclinic, P 1 -bar, a = 9.906 (2) Å, b = 9.736 (2) Å, c = 12.126 (2) Å, α = 76.07 (2)°, β = 78.21 (2)°, γ = 65.34 (2)°, V = 1024.6 (3) ų, and Z = 2. Treatment of 7a with one equivalent of PMe₃ per Rh center results in regeneration of the vinylcyclopropene, demonstrating the reversibility of the ring opening reaction. Deuterium labelling studies show that both the ring opening and closing reactions proceed with retention of configuration at the vinyl olefin. Thus the trans-deuterated vinylcyclopropene 6b reacts with [RhCl(C₂H₄)₂]₂ to give 7b in which deuterium is located exclusively in the syn position. Treatment of 7b with T1(C₅H₅) yields 8b . Treatment of 7b with one equivalent of PMe₃ per Rh center results in formation of 6b as the sole organic product. Unlike their triphenyl relative 2 , the tri-Bu complexes 7a , 7b, 8a , and 8b are stereochemically rigid in solution at room temperature, and do not undergo an η³ → η¹ → η³ isomerization on the NMR time scale. However, after prolonged heating, syn-anti site exchange of H and D slowly takes place with 8b .     

Kinetics and Mechanism of the Platinum(II)-Catalyzed Hydroarylation of Vinyl Arenes with 1,2-Dimethylindole

The mechanism of the intermolecular hydroarylation of vinyl arenes ( 1 ) with 1,2-dimethylindole ( 2 ) catalyzed by PtCl₂ has been evaluated through a combination of kinetic analysis, deuterium labeling studies, and stereochemical analysis. The results of these and additional experiments are consistent with a mechanism for hydroarylation involving rapid and reversible complexation of vinyl arene to the catalytically inactive platinum mono(vinyl arene)complex trans-PtCl₂(H₂C=CHAr)(solvent) to form the reactive platinum bis(vinyl arene) complex trans-PtCl₂(H₂C=CHAr)₂, which undergoes turnover-limiting, outer-sphere attack of indole. Rapid protodemetallation of the resulting platinum alkyl complex releases product and regenerates the equilibrating mixture of platinum π-vinyl arene complexes.     

Kinetic Study of Nickel Oxide Reduction by Methane

The reduction of the nickel oxide, NiO, by methane was investigated in this work. The thermogravimetric technique was used for the determination of kinetic parameters for the reaction. The reaction was carried out in the temperature range of 600–725 °C, at atmospheric pressure with porous pellets prepared from nickel oxide powder with a mean particle size of 0.026 μm. The conversion‐time data have been interpreted by using the grain model. Complete conversion can be achieved in 11 min at 725 °C, which is shorter than the time required by carbon, i.e., ca. 120 min at 1000 °C. This faster reduction in comparison with carbonthermal reduction is attributed to the high carbon activity in methane. For the first order reaction with respect to methane concentration, the activation energy is found to be 63.9 kcal/g mol.     

Studies on thermal degradation of synthetic polymers. XV. Estimation of the product yield on the basis of intensity function for thermal gasification of isotactic and atactic polypropylenes

The kinetic equation for the pyrolysis gasification reaction of isotactic and atactic polypropylenes has been established. The difference in tacticity of the samples does not much affect the kinetic parameters. The exponent a of the intensity function I_F = Tδ^a (K·sec^a), concerning the severity of decomposition conditions, has been approximated as 0.039 (isotactic) and 0.040 (atactic), respectively from the kinetic parameters in this experiment. The calculated values of the product yield from Arrhenius equations, k = 2.0 × 10¹⁰ exp(?40.9 × 10³/RI_F) (isotactic) and k = 1.2 × 10¹⁰ exp(–41.4 × 10³/RI_F) (atactic), for the I_F standard agree with the experimental values.     

Kinetics study of isothermal nicotine release from poly(acrylic acid) hydrogel

The isothermal kinetic of the release of nicotine from a poly(acrylic acid) (PAA) hydrogel was investigated at temperature range from 26°C to 45°C. Specific shape parameters of the kinetic curves, the period of linearity and saturation time were determined. The change in the specific shape parameters of the kinetic curves with temperature and the kinetic parameters of release of nicotine E_a and ln A were determined. By applying the “model fitting” method it was established that the kinetic model of release of nicotine from the PAA hydrogel was [1 − (1 − α)^1/3] = k_Mt. The limiting stage of the kinetics release of nicotine was found to be the contracting volume of the interaction interface. The distribution function of the activation energy was determined and the most probable values of activation energies of 25.5 kJ mol⁻¹ and 35 kJ mol⁻¹ were obtained. Energetically heterogeneity of the interaction interface was explained by the existence of the two different modes of bonding the nicotine molecules onto the hydrogel network by hydrogen bond and electrostatic forces. © 2010 Wiley Periodicals, Inc. J Appl Polym Sci, 2011