Polyphosphoinositide formation in isolated cardiac plasma membranes

Phosphatidylinositol (PtdIns) and phosphatidylinositol 4-phosphate (PtdIns4P) kinase activities in plasma membranes isolated from canine left ventricle were partially characterized, and their sensitivity to a number of intracellular variables was established. PtdIns and PtdIns4P kinase activities were estimated by the formation of [³²P]PtdIns4P and [³²P]phosphatidylinositol 4,5-bisphosphate ([³²P]PtdIns(4,5)P₂), respectively, when membranes were incubated with [γ-³²P]ATP and 0.1% Triton X-100. Unlike [³²P]-PtdIns4P formation, [³²P]PtdIns(4,5)P₂ formation required exogenous (PtdIns4P) substrate. [³²P]-PtdIns4P and [³²P]PtdIns(4,5)P₂ formation were insensitive to Ca²⁺ at concentrations ranging from 0.1–30 μM. The hydrolysis of [³²P]PtdIns4P was less than 15% under standard assay conditions for measuring its formation, and was unaffected by any of the variables tested. The apparent Km of the PtdIns kinase for ATP was 53±13 (S.E.M.) μM (N=3). ADP inhibited [³²P]PtdIns4P formation competitively with respect to ATP, the Ki being 0.4 mM. The data indicate that ADP is a poor competitive inhibitor of PtdIns kinase at the concentrations which are believed to be present intracellularly normally or which may be attained during mild hypoxia provided ATP levels are maintained in the millimolar range. Hence, any response of the myocardium to α-adrenergic hormones during mild hypoxia would be largely unimpaired by effects of Ca²⁺ on PtdIns and PtdIns(4,5)P₂, or of ADP on PtdIns kinase activity.     

When Isolated at Full Receptivity,in Vitro Fertilized Wheat (Triticum aestivum,L.) Egg Cells Reveal [Ca2+]cyt Oscillation of Intracellular Origin

During in vitro fertilization of wheat (Triticum aestivum, L.) in egg cells isolated at various developmental stages, changes in cytosolic free calcium ([Ca²⁺]_cyt) were observed. The dynamics of [Ca²⁺]_cyt elevation varied, reflecting the difference in the developmental stage of the eggs used. [Ca²⁺]_cyt oscillation was exclusively observed in fertile, mature egg cells fused with the sperm cell. To determine how [Ca²⁺]_cyt oscillation in mature egg cells is generated, egg cells were incubated in thapsigargin, which proved to be a specific inhibitor of the endoplasmic reticulum (ER) Ca²⁺-ATPase in wheat egg cells. In unfertilized egg cells, the addition of thapsigargin caused an abrupt transient increase in [Ca²⁺]_cyt in the absence of extracellular Ca²⁺, suggesting that an influx pathway for Ca²⁺ is activated by thapsigargin. The [Ca²⁺]_cyt oscillation seemed to require the filling of an intracellular calcium store for the onset of which, calcium influx through the plasma membrane appeared essential. This was demonstrated by omitting extracellular calcium from (or adding GdCl₃ to) the fusion medium, which prevented [Ca²⁺]_cyt oscillation in mature egg cells fused with the sperm. Combined, these data permit the hypothesis that the first sperm-induced transient increase in [Ca²⁺]_cyt depletes an intracellular Ca²⁺ store, triggering an increase in plasma membrane Ca²⁺ permeability, and this enhanced Ca²⁺ influx results in [Ca²⁺]_cyt oscillation.     

PTEN and Other PtdIns(3,4,5)P3 Lipid Phosphatases in Breast Cancer

The phosphoinositide 3-kinase (PI3K)/AKT signalling pathway is hyperactivated in ~70% of breast cancers. Class I PI3K generates PtdIns(3,4,5)P₃ at the plasma membrane in response to growth factor stimulation, leading to AKT activation to drive cell proliferation, survival and migration. PTEN negatively regulates PI3K/AKT signalling by dephosphorylating PtdIns(3,4,5)P₃ to form PtdIns(4,5)P₂. PtdIns(3,4,5)P₃ can also be hydrolysed by the inositol polyphosphate 5-phosphatases (5-phosphatases) to produce PtdIns(3,4)P₂. Interestingly, while PTEN is a bona fide tumour suppressor and is frequently mutated/lost in breast cancer, 5-phosphatases such as PIPP, SHIP2 and SYNJ2, have demonstrated more diverse roles in regulating mammary tumourigenesis. Reduced PIPP expression is associated with triple negative breast cancers and reduced relapse-free and overall survival. Although PIPP depletion enhances AKT phosphorylation and supports tumour growth, this also inhibits cell migration and metastasis in vivo, in a breast cancer oncogene-driven murine model. Paradoxically, SHIP2 and SYNJ2 are increased in primary breast tumours, which correlates with invasive disease and reduced survival. SHIP2 or SYNJ2 overexpression promotes breast tumourigenesis via AKT-dependent and independent mechanisms. This review will discuss how PTEN, PIPP, SHIP2 and SYNJ2 distinctly regulate multiple functional targets, and the mechanisms by which dysregulation of these distinct phosphoinositide phosphatases differentially affect breast cancer progression.     

Differential Regulation of Ca2+-Activated Cl− Channel TMEM16A Splice Variants by Membrane PI(4,5)P2

TMEM16A is a Ca²⁺-activated Cl⁻ channel that controls broad cellular processes ranging from mucus secretion to signal transduction and neuronal excitability. Recent studies have reported that membrane phospholipid phosphatidylinositol 4,5-bisphosphate (PI(4,5)P₂) is an important cofactor that allosterically regulates TMEM16A channel activity. However, the detailed regulatory actions of PIP₂ in splice variants of TMEM16A remain unclear. Here, we demonstrated that the attenuation of membrane phosphoinositide levels selectively inhibited the current amplitude of the TMEM16A(ac) isoform by decreasing the slow, but not instantaneous, Cl⁻ currents, which are independent of the membrane potential and specific to PI(4,5)P₂ depletion. The attenuation of endogenous PI(4,5)P₂ levels by the activation of Danio rerio voltage-sensitive phosphatase (Dr-VSP) decreased the Cl⁻ currents of TMEM16A(ac) but not the TMEM16A(a) isoform, which was abolished by the co-expression of PIP 5-kinase type-1γ (PIPKIγ). Using the rapamycin-inducible dimerization of exogenous phosphoinositide phosphatases, we further revealed that the stimulatory effects of phosphoinositide on TMEM16A(ac) channels were similar in various membrane potentials and specific to PI(4,5)P₂, not PI4P and PI(3,4,5)P₃. Finally, we also confirmed that PI(4,5)P₂ resynthesis is essential for TMEM16A(ac) recovery from Dr-VSP-induced current inhibition. Our data demonstrate that membrane PI(4,5)P₂ selectively modulates the gating of the TMEM16A(ac) channel in an agonistic manner, which leads to the upregulation of TMEM16A(ac) functions in physiological conditions.     

Choline-Sigma-1R as an Additional Mechanism for Potentiation of Orexin by Cocaine

Orexin A, an endogenous peptide involved in several functions including reward, acts via activation of orexin receptors OX₁ and OX₂, Gq-coupled GPCRs. We examined the effect of a selective OX₁ agonist, OXA (17-33) on cytosolic calcium concentration, [Ca²⁺]_i, in neurons of nucleus accumbens, an important area in the reward circuit. OXA (17-33) increased [Ca²⁺]_i in a dose-dependent manner; the effect was prevented by SB-334867, a selective OX₁ receptors antagonist. In Ca²⁺-free saline, the OXA (17-33)-induced increase in [Ca²⁺]_i was not affected by pretreatment with bafilomycin A1, an endo-lysosomal calcium disrupter, but was blocked by 2-APB and xestospongin C, antagonists of inositol-1,4,5-trisphosphate (IP₃) receptors. Pretreatment with VU0155056, PLD inhibitor, or BD-1047 and NE-100, Sigma-1R antagonists, reduced the [Ca²⁺]_i response elicited by OXA (17-33). Cocaine potentiated the increase in [Ca²⁺]_i by OXA (17-33); the potentiation was abolished by Sigma-1R antagonists. Our results support an additional signaling mechanism for orexin A-OX₁ via choline-Sigma-1R and a critical role for Sigma-1R in the cocaine–orexin A interaction in nucleus accumbens neurons.     

Effects of pre- and postweaning undernutrition on polyphosphoinositide pools in rat kidney

The effects of undernutrition on polyphosphoinositide levels in rat kidneys removed and frozen immediately after animal death or 10 min later were determined. Weanling (21-day-old) rats of dams fed a 5 or 22% protein diet and litters fed either normal or protein-deficient diets for an additional six wk were used. Nutritional deprivation lowered phosphatidylinositol-4-phosphate (PtdIns4P) preferentially (35–40%) but but preserved phosphatidylinositol-4,5-bisphosphate (PtdIns4,5P₂) at weaning. This effect was not completely reversed in animals nutritionally rehabilitated after weaning. Postweaning protein deficiency did not reduce the levels of these lipids. Postmortem loss was the same for all five groups, minimal for PtdIns4P and about one-third for PtdIns4,5P₂.     

Phospholipids inTrypanosoma cruzi: Phosphoinositide composition and turnover

The polyphosphoinositides fromTrypanosoma cruzi were isolated by preparative thin-layer chromatography (TLC) and identified. When myo-[³H]inositol was present in the culture medium for five days, analyses showed the presence of phosphatidylinositol (PI), lysophosphatidylinositol (lysoPI), phosphatidylinositol 4-phosphate (PIP) and phosphatidylinositol 4,5-bisphosphate (PIP₂). Short-term incubation with³²P_i led to higher percentages of incorporation into phosphatidylethanolamine (PE), lysophosphatidylethanolamine (lysoPE) and PI compared to the other glycerophospholipids. The phosphoinositides (PI, PIP and PIP₂) contained a larger proportion of unsaturated than saturated fatty acids. High proportions of 18∶2 were found in the three phosphoinositides analyzed, whereas the major saturated fatty acid was 18∶0. Watersoluble inositol phosphates (IP, IP₂ and IP₃) were also identified.     

First example of a near-IR photodetector based on neutral [M(R-dmet)2] bis(1,2-dithiolene) metal complexes

We report on the first example of a light signal photodetecting device based on the new class of neutral bis(1,2-dithiolene) complexes [M(R-dmet)₂], whose ligand is intermediate between those belonging to the classes dmit²⁻ and R,R′-timdt²⁻ (dmit²⁻ = 2-thioxo-1,3-dithiole-4,5-dithiolato; R,R′-timdt²⁻ = N,N′-disubstituted 2-thioxoimidazoline-4,5-dithiolato; R-dmet²⁻ = N-substituted 2-thioxothiazoline-4,5-dithiolato). The device, hosting the active material [Ni(Et-dmet)₂] (1) casted on a quartz substrate, acts as a photodetector responsive in a wide spectral range, reaching the appealing near-IR region, and features the highest efficiency values as compared to those based on the dithiolene complexes [Ni(Me,Non-timdt)₂] (2) and [Pt(Et,Pent-timdt)₂] (3).     

Quantitative FRET Microscopy Reveals a Crucial Role of Cytoskeleton in Promoting PI(4,5)P2 Confinement

Phosphatidylinositol 4,5-bisphosphate (PI(4,5)P₂) is an essential plasma membrane component involved in several cellular functions, including membrane trafficking and cytoskeleton organization. This function multiplicity is partially achieved through a dynamic spatiotemporal organization of PI(4,5)P₂ within the membrane. Here, we use a Förster resonance energy transfer (FRET) approach to quantitatively assess the extent of PI(4,5)P₂ confinement within the plasma membrane. This methodology relies on the rigorous evaluation of the dependence of absolute FRET efficiencies between pleckstrin homology domains (PH_PLCδ) fused with fluorescent proteins and their average fluorescence intensity at the membrane. PI(4,5)P₂ is found to be significantly compartmentalized at the plasma membrane of HeLa cells, and these clusters are not cholesterol-dependent, suggesting that membrane rafts are not involved in the formation of these nanodomains. On the other hand, upon inhibition of actin polymerization, compartmentalization of PI(4,5)P₂ is almost entirely eliminated, showing that the cytoskeleton network is the critical component responsible for the formation of nanoscale PI(4,5)P₂ domains in HeLa cells.     

Identification of a Small‐Molecule Inhibitor of HIV‐1 Assembly that Targets the Phosphatidylinositol (4,5)‐bisphosphate Binding Site of the HIV‐1 Matrix Protein

The development of drug resistance remains a critical problem for current HIV‐1 antiviral therapies, creating a need for new inhibitors of HIV‐1 replication. We previously reported on a novel anti‐HIV‐1 compound, N²‐(phenoxyacetyl)‐N‐[4‐(1‐piperidinylcarbonyl)benzyl]glycinamide ( 14 ), that binds to the highly conserved phosphatidylinositol (4,5)‐bisphosphate (PI(4,5)P₂) binding pocket of the HIV‐1 matrix (MA) protein. In this study, we re‐evaluate the hits from the virtual screen used to identify compound 14 and test them directly in an HIV‐1 replication assay using primary human peripheral blood mononuclear cells. This study resulted in the identification of three new compounds with antiviral activity; 2‐(4‐{[3‐(4‐fluorophenyl)‐1,2,4‐oxadiazol‐5‐yl]methyl})‐1‐piperazinyl)‐N‐(4‐methylphenyl)acetamide ( 7 ), 3‐(2‐ethoxyphenyl)‐5‐[[4‐(4‐nitrophenyl)piperazin‐1‐yl]methyl]‐1,2,4‐oxadiazole ( 17 ), and N‐[4‐ethoxy‐3‐(1‐piperidinylsulfonyl)phenyl]‐2‐(imidazo[2,1‐b][1,3]thiazol‐6‐yl)acetamide ( 18 ), with compound 7 being the most potent of these hits. Mechanistic studies on 7 demonstrated that it directly interacts with and functions through HIV‐1 MA. In accordance with our drug target, compound 7 competes with PI(4,5)P₂ for MA binding and, as a result, diminishes the production of new virus. Mutation of residues within the PI(4,5)P₂ binding site of MA decreased the antiviral effect of compound 7 . Additionally, compound 7 displays a broadly neutralizing anti‐HIV activity, with IC₅₀ values of 7.5–15.6 μM for the group M isolates tested. Taken together, these results point towards a novel chemical probe that can be used to more closely study the biological role of MA and could, through further optimization, lead to a new class of anti‐HIV‐1 therapeutics.     

Formation of double-surface-silvered polyimide films via a direct ion-exchange self-metallization technique: The case of BPADA/ODA and [Ag(NH3)2]+

Double-surface-silvered polyimide (PI) films have been successfully fabricated via a direct ion-exchange self-metallization method using silver ammonia complex cation ([Ag(NH₃)₂]⁺) as silver resource and bis[4-(3,4-dicarboxyphenoxy)phenyl]propane dianhydride/4,4′-oxydianiline (BPADA/ODA)-based poly(amic acid) (PAA) as the PI precursor. The alkaline characteristic of the silver precursor dramatically improves the efficiency of the ion exchange and film metallization process. By using an aqueous [Ag(NH₃)₂]⁺ solution with a concentration of only 0.01M and an ion-exchange time of only 5 min, metallized films with desirable performance could be easily obtained by simply heating the silver(I)-doped PAA films to 300°C. The strong hydrolysis effect of the basic [Ag(NH₃)₂]⁺ cations on the flexible and acidic BPADA/ODA PAA chains was observed during the ion exchange process by the quantitative evaluation of the mass loss of PAA matrix. Nevertheless, under the present experimental conditions, the final metallized film essentially retained the basic structural, thermal, and mechanical properties of the pristine PI, which make it a truly applicable material. © 2012 Wiley Periodicals, Inc. J Appl Polym Sci, 2012     

Preparation, structure and electrochemistry of a polypyrrole hybrid film with [Pd(dmit)2], bis(1,3-dithiole-2-thione-4,5-dithiolate)palladate(II)

The synthesis of a hybrid material obtained by electropolymerization of a solution of pyrrole and [NEt₄]₂[Pd(dmit)₂] (1,3-dithiole-2-thione-4,5-dithiolate, [dmit]²⁻, [C₃S₅]²⁻) in acetonitrile solution is reported. FTIR and UV-vis spectroscopy showed that the [Pd(dmit)₂]²⁻ anion had been inserted in the polypyrrole framework without modification during the electropolymerization process. Cyclic voltammetry showed that the material has electroactivity undergoing redox processes related to the conducting polymer and the counteranion. The electrochemical results also suggest that the counteranion is not trapped in the PPy matrix undergoing anion exchange during the redox cycle of PPy. The PPy/[Pd(dmit)₂]²⁻ exhibits good thermal stability and has a higher intrinsic conductivity value (4.27 × 10⁻³ S cm⁻¹) than do other PPy/dmit films previously studied.     

The formation of lysophosphatidylinositol phosphate in human platelet microsomes

The formation of lysophosphatidylinositol phosphate (lysoPIP) from lysophosphatidylinositol (lysoPI) via kinase activity was studied in microsomal preparations from human platelets. For this purpose, [³H]lysoPI or [³H]phosphatidylinositol ([³H]PI) was prepared and incubated in the presence or absence of ATP, MgCl₂ and Triton X-100, and the appearances of radioactivity in [³H]lysoPIP and [³H]phosphatidylinositol phosphate ([³H]PIP), respectively, were monitored using thin layer chromatography. Both lysoPI and PI phosphorylations were completely dependent upon the presence of ATP and MgCl₂ in the incubation medium; Triton X-100 addition stimulated both reactions, with the stimulation of PI conversion being considerably greater than that for lysoPI conversion. The present results demonstrate that lysoPI can be converted to lysoPIP by phosphorylation in human platelet microsomes. The potential significance of this enzymatic reaction in stimulated cells is discussed in relation to the generation of inositol-1,4,5-trisphosphate, an important intracellular second messenger.     

Extraction of Pr(III), Nd(III), and Dy(III) from HTFSA Aqueous Solution by TODGA/Phosphonium-Based Ionic Liquids

The extraction behavior of rare earth (RE) elements using N,N,N′,N′-tetraoctyl diglycolamide (TODGA) in an ionic liquid (IL) system was investigated by slope analyses. Metallic salts of Pr(III), Nd(III), and Dy(III) with bis(trifluoromethylsulfonyl)amide (TFSA) were synthesized and studied for their extraction mechanism. The selected concentration of TODGA was diluted with triethylpentylphosphonium bis(trifluoromethylsulfonyl)amide ([P₂₂₂₅][TFSA]) to prepare an extracting phase for the slope analyses. The stoichiometry of RE(III) was determined in order to estimate the extracted species. Furthermore, the complexation state of the extracted species was evaluated by spectroscopic analyses, including Fourier-transform infrared (FT-IR) spectroscopy, Raman spectroscopy, and ultraviolet–visible (UV–Vis) spectroscopy. The FT-IR and Raman spectra were estimated using density functional theory (DFT) calculations. Thorough analysis of the FT-IR spectrum was carried out in order to assign the TODGA group that mainly coordinated the metal ion. The solvation of the [TFSA]^? anion in the coordination sphere of [Nd(TODGA)_(2–3)]³⁺ was investigated by Raman spectroscopic analysis. The coordination ability of TODGA was investigated from the peak shift of the hypersensitive transition (⁴I_9/2→²G_7/2) in UV–Vis spectroscopic measurements. From electrochemical analysis, the extracted [Nd(TODGA)₃]³⁺ complex in [P₂₂₂₅][TFSA] was found to be reduced as per the following reaction: [Nd(TODGA)₃]³⁺ + 3e^? → Nd(0) + 3[TODGA] at ?3.0 V, and the diffusion coefficient of [Nd(TODGA)₃]³⁺ was calculated to be 1.6 × 10^?11 m² s^?1 at 373 K. The direct electrodeposition of the extracted [Nd(TODGA)₃]³⁺ in [P₂₂₂₅][TFSA] at 373 K allowed us to conclude that the middle layer of Nd electrodeposits was the metallic state, while a part of the top surface was the oxidation state by XPS analysis.     

Inositol 1,4,5-trisphosphate accumulation in brain of lithium-treated rats

The mechanism of action of lithium as a drug for patients with affective disorders was investigated. Three-week-old male rats were orally administered 2.7 mEq Li₂CO₃/kg/d for 1 or 3 wk, and phosphatidylinositol (PI), phosphatidylinositol 4-phosphate (PIP), phosphatidylinositol 4,5-bisphosphate (PIP₂), inositol phosphate (IP), inositol diphosphate (IP₂) and inositol triphosphate (IP₃) levels in brain were measured. The levels of IP were increased 1.7 and 2.4 times after 1 wk and 3 wk of lithium administration, respectively, while PI, PIP, PIP₂, IP₂ and IP₃ levels were not altered. IP₃ was further fractionated by high-performance liquid chromatography into I-1,3,4-P₃ and I-1,4,5-P₃. In the control rat brain, the relative percentages of I-1,3,4-P₃ and I-1,4,5-P₃ were 95.8 and 4.2, respectively. However, after 3 wk of lithium administration, the values were changed to 69.6 and 30.3%, respectively. This increase in the neurotransducer I-1,4,5-P₃ in the brain may be relevant to the mechanism of action in the lithium treatment of patients with manic-depressive disorders.     

Conductivity and ion transport in silver—tin pyrophosphate baths

Mass transfer of metal ions and a pyrophosphate ion in silver—tin pyrophosphate baths was studied. The complex ion, [Sn₂(P₂O₇)₂]^6?, is formed in a solution of pH greater than 9.7 with a pyrophosphate to Sn²⁺ ratio of 2:1. The pyrophosphate ion simultaneously functions for enhancing conductivity as a complexing agent to promote the codeposition of silver. The diffusion coefficients of [Ag(CN)₂]^? and [Sn₂(P₂O₇)₂]^? were 1.39 × 10^?5 and 7.87 × 10^?6 cm² s^?1, respectively, but that of [Sn₂(P₂O₇)₂]^6? become larger as the pyrophosphate concentration was increased. The apparent activation energy of diffusion of [Ag(CN)₂]^? was 3.1 kcal mol^?1 and that of [Sn₂(P₂O₇)₂]^6? was 2.7 kcal mol^?1.     

Benzene polyphosphates as tools for cell signalling: inhibition of inositol 1,4,5-trisphosphate 5-phosphatase and interaction with the PH domain of protein kinase Balpha

Novel benzene polyphosphates were synthesised as inositol polyphosphate mimics and evaluated against type-I inositol 1,4,5-trisphosphate 5-phosphatase, which only binds soluble inositol polyphosphates, and against the PH domain of protein kinase Balpha (PKBalpha), which can bind both soluble inositol polyphosphates and inositol phospholipids. The most potent trisphosphate 5-phosphatase inhibitor is benzene 1,2,4-trisphosphate (2, IC(50) of 14 microM), a potential mimic of D-myo-inositol 1,4,5-trisphosphate, whereas the most potent tetrakisphosphate Ins(1,4,5)P(3) 5-phosphatase inhibitor is benzene 1,2,4,5-tetrakisphosphate, with an IC(50) of 4 microM. Biphenyl 2,3',4,5',6-pentakisphosphate (4) was the most potent inhibitor evaluated against type I Ins(1,4,5)P(3) 5-phosphatase (IC(50) of 1 microM). All new benzene polyphosphates are resistant to dephosphorylation by type I Ins(1,4,5)P(3) 5-phosphatase. Unexpectedly, all benzene polyphosphates studied bind to the PH domain of PKBalpha with apparent higher affinity than to type I Ins(1,4,5)P(3) 5-phosphatase. The most potent ligand for the PKBalpha PH domain, measured by inhibition of biotinylated diC(8)-PtdIns(3,4)P(2) binding, is biphenyl 2,3',4,5',6-pentakisphosphate (4, K(i)=27 nm). The approximately 80-fold enhancement of binding relative to parent benzene trisphosphate is explained by the involvement of a cation-pi interaction. These new molecular tools will be of potential use in structural and cell signalling studies.     

Ionic liquid-based extraction and separation trends of bioactive compounds from plant biomass

Ionic liquids have been projected as the best solvent for extraction and separation of bioactive compounds from various origins. This review offers a collection of the published results, using ionic liquids for the extraction and purification of biomolecules. Ionic liquids have been studied as solvents, co-solvents and supported materials for separation of bioactive compounds. The ionic liquids-based extraction procedures were previously reported, such as ionic liquids-based solid-liquid extraction, liquid-liquid extraction and ionic liquids-modified materials are reviewed and compared to their performance. In this review, the main activities and future challenges are discussed, with major gaps identified using ionic liquids in extraction procedures and by advancing few steps to overcome these drawbacks.

Abbreviation: [(HSO₃)C₄MIM]⁺: 1-(4-sulfonylbutyl)-3-methylimidazolium; [(C₆H₃OCH₂)₂im]⁺: 1,3-dihexyloxymethylimidazolium; [C_nC₁MIM]⁺: 1-alkyl-2,3-dimethylimidazolium; [C_nMIM]^{+; [Cn, 2, 3, 4, 6, 8, 10, 12]}: 1-alkyl-3-methylimidazolium; [C_nC₁pyr]⁺: 1-alkyl-3-methylpyridinium; [C_nim]⁺: 1-alkylimidazolium; [C_npyr]⁺: 1-alkylpyridinium; [aC_nim]⁺: 1-allyl-3-alkylimidazolium; [C₇H₇MIM]⁺: 1-benzyl-3-methylimidazolium; [C₄(C₁C₁C₁Si)im]⁺: 1-butyl-3-trimethylsilylimidazolium; [(HOOC)C₂MIM]⁺: 1-carboxyethyl-3-methylimidazolium; [(OH)C_nMIM]⁺: 1-hydroxyalkyl-3-methylimidazolium; [(C₂H₅O)₃SiC₃MIM]⁺: 1-methyl-3-(triethoxy)silypropyl imidazolium; [(NH₂)C₃MIM]⁺: 1-propylamine-3-methylimidazolium; [C_wH_xN_yO_z]⁺: Chirally functionalized methylimidazolium; [P_{10(3OH)(3OH)(3OH)}]⁺: Decyltris(3-hydrox- ypropyl) phosphonium; [N_111(2OH)]⁺: N,N,N-trimethyl-N-(2-hydroxyethyl) ammonium (cholinium); [N_00nn]⁺: N,N-dialkylammonium; [N_0nn(2OH)]⁺: N,N-dialkyl-N-(2-hydroxyethyl) ammonium; [C₁₀C₁₀C₁gluc]⁺: N,N-didecyl-N-methyl-d-glucaminium; [N_11(2(O)1)0]⁺: N,N-dimethyl(2-methoxyethyl) ammonium; [N_{11(2OH)(C7H7)}]⁺: N-benzyl-N,N-dimethyl-N-(2-hydroxyethyl) ammonium; [P₆₆₆₁₄]⁺: Trihexyltetradecylph- osphonium; [P_i(444)1]⁺: Triisobutyl (methyl) phosphonium; P.minus: Polygonum minus; NPs: Nanoparticle; ZnO : Zinc oxide nanoparticles ; Ni NPs: Nickel nanoparticles; MO: Methyl orange; UAE: Ultrasonic-assisted extraction; LLE: Liquid-liquid extraction; ABS: Aqueous biphasic system ; [Ace]^?: Acesulfamate; [Ala]^?: alalinate; [TMPP]^?: bis(2,4,4-trimethylpentyl)phosphinate; : ; [NTf₂]^?: bis(trifluoromethylsulfonyl)imide; [[Br]^–]: [Br]omide; [Calc]: calkanoate; [Cl]^–: chloride; [Bz]^?: benzoate; [PF₆]^?: hexafluorophosphate; [HSO₄]^?: hydrogenosulfate; [OH]^?: hydroxide; I^–: iodide; [Lac]^?: lactate; [NO₃]^?: nitrate; [[Cl]O₄]^?: perchlorate; [Phe]^?: phenilalaninate; [BF₄]^?: tetrafluoroborate; [SCN]^?: thiocyanate; [C(CN)₃]^?: tricyanomethanide; [CF₃CO₂]^?: trifluoroacetate; [CF₃SO₃]^?: trifluoromethanesulfonate; [FAP]^?: tris(pentafluoroethyl)trifluorophosphate; ILs: Ionic liquids; Ag NPs: Silver nanoparticle; Cu NPs: Copper nanoparticle; MB: Methylene blue; MR: Methyl red ; MAE: Microwave-assisted extraction; SLE: solid-liquid extraction.     

Interaction of the catalytic domain of inositol 1,4,5-trisphosphate 3-kinase A with inositol phosphate analogues

The levels of inositol 1,4,5-trisphosphate [Ins(1,4,5)P3] in the cytoplasm are tightly regulated by two enzymes, Ins(1,4,5)P3 3-kinase and type I Ins(1,4,5)P3 5-phosphatase. The catalytic domain of Ins(1,4,5)P3 3-kinase (isoenzymes A, B and C) is restricted to approximately 275 amino acids at the C-terminal end. We were interested in understanding the catalytic mechanism of this key family of enzymes in order to exploit this in inhibitor design. We expressed the catalytic domain of rat Ins(1,4,5)P3 3-kinase A in Escherichia coli as a His- and S-tagged fusion protein. The purified enzyme was used in an Ins(1,4,5)P3 kinase assay to phosphorylate a series of inositol phosphate analogues with three or four phosphate groups. A synthetic route to D-2-deoxy-Ins(1,4,5)P3 was devised. D-2-Deoxy-Ins(1,4,5)P3 and D-3-deoxy-Ins(1,4,6)P3 were potent inhibitors of the enzyme, with IC50 values in the micromolar range. Amongst all analogues tested, only D-2-deoxy-Ins(1,4,5)P3 appears to be a good substrate of the Ins(1,4,5)P3 3-kinase. Therefore, the axial 2-hydroxy group of Ins(1,4,5)P3 is not involved in recognition of the substrate nor does it participate in the phosphorylation mechanism of Ins(1,4,5)P3. In contrast, the equatorial 3-hydroxy function must be present in that configuration for phosphorylation to occur. Our data indicate the importance of the 3-hydroxy function in the mechanism of inositol trisphosphate phosphorylation rather than in substrate binding.     

Synthesis of trans-4,5-epoxy-(E)-2-decenal and its deuterated analog used for the development of a sensitive and selective quantification method based on isotope dilution assay with negative chemical ionization

The volatile compound trans-4,5-epoxy-(E)-2-decenal (1) was synthesized in two steps with good overall yields. The newly developed method is based on trans-epoxidation of (F)-2-octenal with alkaline hydrogen peroxide followed by a Wittig-type chain elongation with the ylide formylmethylene triphenylphosphorane. For the synthesis of [4,5-²H₂]-trans-4,5-epoxy-(E)-2-decenal (d-1), [2,3-²H₂]-(E)-2-octenal was prepared by reduction of 2-octyn-1-ol with lithium aluminum deuteride and subsequent oxidation of [2,3-²H₂]-(E)-2-octen-1-ol with manganese oxide. Compound d-1 was used as internal standard for the quantification of 1 by isotope dilution assay. Among various mass spectrometry (MS) ionization techniques tested, negative chemical ionization with ammonia as reagent gas gave best results with respect to both sensitivity and selectivity. The detection limit was found to be at about 1 pg of the analyte introduced into the gas chromatography-MS system.