Image registration-based brain tumor detection and segmentation using ANFIS classification approach

Abnormal cells in human brain lead to the development of tumors. Manual detection of this tumor region is a time-consuming process. Hence, this paper proposes an efficient and automated computer-aided methodology for brain tumor detection and segmentation using image registration technique and classification approaches. This proposed work consists of the following modules: image registration, contourlet transform, and feature extraction with feature normalization, classification, and segmentation. The extracted features are optimized using genetic algorithm, and then an adaptive neuro-fuzzy inference system classification approach is used to classify the features for the detection and segmentation of tumor regions in brain magnetic resonance imaging. A quantitative analysis is performed to evaluate the proposed methodology for brain tumor detection using sensitivity, specificity, segmentation accuracy, precision, and Dice similarity coefficient.     

Segmentation of glioma tumors using convolutional neural networks

The abnormal development of cells in brain leads to the formation of tumors in brain. In this article, image fusion based brain tumor detection and segmentation methodology is proposed using convolutional neural networks (CNN). This proposed methodology consists of image fusion, feature extraction, classification, and segmentation. Discrete wavelet transform (DWT) is used for image fusion and enhanced brain image is obtained by fusing the coefficients of the DWT transform. Further, Grey Level Co‐occurrence Matrix features are extracted and fed to the CNN classifier for glioma image classifications. Then, morphological operations with closing and opening functions are used to segment the tumor region in classified glioma brain image.     

A computer‐aided approach for meningioma brain tumor detection using CANFIS classifier

Abnormal growth of cells in brain leads to the formation of tumors in brain. The earlier detection of the tumors in brain will save the life of the patients. Hence, this article proposes a computer‐aided fully automatic methodology for brain tumor detection using Co‐Active Adaptive Neuro Fuzzy Inference System (CANFIS) classifier. The internal region of the brain image is enhanced using image normalization technique and further contourlet transform is applied on the enhanced brain image for the decomposition with different scales. The grey level and heuristic features are extracted from the decomposed coefficients and these features are trained and classified using CANFIS classifier. The performance of the proposed brain tumor detection is analyzed in terms of classification accuracy, sensitivity, specificity, and segmentation accuracy.     

Glioma brain tumor detection and segmentation using weighting random forest classifier with optimized ant colony features

The uncontrolled growth of cells in brain regions leads to the tumor regions and these abnormal tumor regions are scanned by magnetic resonance imaging (MRI) technique as an image. This paper proposes random forest classifier based Glioma brain tumor detection and segmentation methodology using feature optimization technique. The texture features are derived from brain MRI image and these derived feature set are now optimized by ant colony optimization algorithm. These optimized set of features are trained and classified using random forest classification method. This classifier classifies the brain MRI image into Glioma or non-Glioma image based on the optimized set of features. Furthermore, energy-based segmentation method is applied on the classified Glioma image for segmenting the tumor regions. The proposed methodology for Glioma brain tumor stated in this paper achieves 97.7% of sensitivity, 96.5% of specificity, and 98.01% of accuracy.     

Segmentation of tumor using PCA based modified fuzzy C means algorithms on MR brain images

In the field of medical sciences, automatic detection of tumor using magnetic resonance (MR) brain images is a major research area. The goal of the proposed work is to identify the tumors in MR images using segmentation methods and to locate the affected regions of the brain more accurately. Medical images have vast information but they are difficult to examine with lesser computational time. An innovative process is proposed to extract tumor cells using the discrete wavelet transform (DWT). After extracting features with DWT feature reduction is carried out with the principal component analysis (PCA). Modified fuzzy C means (MFCM) technique is used for segmenting the tumor cells. The efficiency of the proposed method to identify different abnormalities in real MR images for intracranial neoplasm detection, tuberculoma, and bilateral thalamic fungal granulomas identification is tested. The results obtained are shown in-terms of Accuracy, Dice Similarity Index (DSI), and Jaccard Index (JI) measures. The performance of the proposed method is tested in terms of performance measures like Accuracy, DSI, and JI. These results are compared with the conventional fuzzy C means (FCM) method.     

Brain MRI denoizing and segmentation based on improved adaptive nonlocal means

Denoizing of magnetic resonance (MR) brain images has been focus of numerous studies in the past. The performance of subsequent stages of image processing, in automated image analysis, is substantially improved by explicit consideration of noise. Nonlocal means (NLM) is a popular denoizing method which exploits usual redundancy present in an image to restore noise free image. It computes restored value of a pixel as weighted average of candidate pixels in a search window. In this article, we propose an improved version of the NLM algorithm which is modified in two ways. First, a robust threshold criterion is introduced, which helps selecting suitable pixels for participation in the restoration process. Second, the search window size is made adaptive using a window adaptation test based on the proposed threshold criterion. The modified NLM algorithm is named as improved adaptive nonlocal means (IANLM). An alternate implementation of IANLM is also proposed which exploits the image smoothness property to yield better denoizing performance. The computational burden is reduced significantly due to proposed modifications. Experiments are performed on simulated and real brain MR images at various noise levels. Results indicate that the proposed algorithm produces not only better denoizing results (quantitatively and qualitatively), but is also computationally more efficient. Moreover, the proposed technique is incorporated in an already proposed segmentation framework to check its validity in the practical scenario of segmentation. Improved segmentation results (quantitative and qualitative) verify the practical usefulness of the proposed algorithm in real world medical applications. © 2013 Wiley Periodicals, Inc. Int J Imaging Syst Technol, 23, 235–248, 2013     

CANFIS based glioma brain tumor classification and retrieval system for tumor diagnosis

Brain tumor classification and retrieval system plays an important role in medical field. In this paper, an efficient Glioma Brain Tumor detection and its retrieval system is proposed. The proposed methodology consists of two modules as classification and retrieval. The classification modules are designed using preprocessing, feature extraction and tumor detection techniques using Co‐Active Adaptive Neuro Fuzzy Inference System (CANFIS) classifier. The image enhancement can be achieved using Heuristic histogram equalization technique as preprocessing and further texture features as Local Ternary Pattern (LTP) features and Grey Level Co‐occurrence Matrix (GLCM) features are extracted from the enhanced image. These features are used to classify the brain image into normal and abnormal using CANFIS classifier. The tumor region in abnormal brain image is segmented using normalized graph cut segmentation algorithm. The retrieval module is used to retrieve the similar segmented tumor regions from the dataset for diagnosing the tumor region using Euclidean algorithm. The proposed Glioma Brain tumor classification methodology achieves 97.28% sensitivity, 98.16% specificity and 99.14% accuracy. The proposed retrieval system achieves 97.29% precision and 98.16% recall rate with respect to ground truth images.     

Computer aided automated detection and classification of brain tumors using CANFIS classification method

The development of abnormal cells in human brain leads to the formation of tumors. This article proposes an efficient approach for brain tumor detection and segmentation using image fusion and co-active adaptive neuro fuzzy inference system (CANFIS) classification method. The brain MRI images are fused and the dual tree complex wavelet transform is applied on the fused image. Then, the statistical features, local ternary pattern features and gray level co-occurrence matrix features. These extracted features are classified using CANFIS classification approach for the classification of source brain MRI image into either normal or abnormal. Further, morphological operations are applied on the abnormal brain MRI image for segmenting the tumor regions. The proposed methodology is evaluated with respect to the performance metrics sensitivity, specificity, positive predictive value, negative predictive value, tumor segmentation accuracy with detection rate. The proposed image fusion based brain tumor detection and classification methodology stated in this article achieves 96.5% of average sensitivity, 97.7% of average specificity, 87.6% of positive predictive value, 96.6% of negative predictive value, and 98.8% of average accuracy.     

A deep learning model integrating convolution neural network and multiple kernel K means clustering for segmenting brain tumor in magnetic resonance images

In medical imaging, segmenting brain tumor becomes a vital task, and it provides a way for early diagnosis and treatment. Manual segmentation of brain tumor in magnetic resonance (MR) images is a time‐consuming and challenging task. Hence, there is a need for a computer‐aided brain tumor segmentation approach. Using deep learning algorithms, a robust brain tumor segmentation approach is implemented by integrating convolution neural network (CNN) and multiple kernel K means clustering (MKKMC). In this proposed CNN‐MKKMC approach, classification of MR images into normal and abnormal is performed by CNN algorithm. At next, MKKMC algorithm is employed to segment the brain tumor from the abnormal brain image. The proposed CNN‐MKKMC algorithm is evaluated both visually and objectively in terms of accuracy, sensitivity, and specificity with the existing segmentation methods. The experimental results demonstrate that the proposed CNN‐MKKMC approach yields better accuracy in segmenting brain tumor with less time cost.     

Analysis and classification of malignancy in pancreatic magnetic resonance images using neural network techniques

Computer-aided diagnosis (CAD) is a computerized way of detecting tumors in MR images. Magnetic resonance imaging (MRI) has been generally used in the diagnosis and detection of pancreatic tumors. In a medical imaging system, soft tissue contrast and noninvasiveness are clear preferences of MRI. Inaccurate detection of tumor and long time consumption are the disadvantages of MRI. Computerized classifiers can greatly renew the diagnosis activity, in terms of both accuracy and time necessity by normal and abnormal images, automatically. This article presents an intelligent, automatic, accurate, and robust method to classify human pancreas MRI images as normal or abnormal in terms of pancreatic tumor. It represents the response of artificial neural network (ANN) and support vector machine (SVM) techniques for pancreatic tumor classification. For this, we extract features from MR images of pancreas using the GLCM method and select the best features using JAFER algorithm. These features are analyzed by five classification techniques: ANN BP, ANN RBF, SVM Linear, SVM Poly, and SVM RBF. We compare the results with benchmark data set of MR brain images. The analytical outcome presents that the two best features used to classify the MR images using ANN BP technique have 98% classification accuracy.     

Multimodal brain tumor detection and classification using deep saliency map and improved dragonfly optimization algorithm

In the last decade, there has been a significant increase in medical cases involving brain tumors. Brain tumor is the tenth most common type of tumor, affecting millions of people. However, if it is detected early, the cure rate can increase. Computer vision researchers are working to develop sophisticated techniques for detecting and classifying brain tumors. MRI scans are primarily used for tumor analysis. We proposed an automated system for brain tumor detection and classification using a saliency map and deep learning feature optimization in this paper. The proposed framework was implemented in stages. In the initial phase of the proposed framework, a fusion-based contrast enhancement technique is proposed. In the following phase, a tumor segmentation technique based on saliency maps is proposed, which is then mapped on original images based on active contour. Following that, a pre-trained CNN model named EfficientNetB0 is fine-tuned and trained in two ways: on enhanced images and on tumor localization images. Deep transfer learning is used to train both models, and features are extracted from the average pooling layer. The deep learning features are then fused using an improved fusion approach known as Entropy Serial Fusion. The best features are chosen in the final step using an improved dragonfly optimization algorithm. Finally, the best features are classified using an extreme learning machine (ELM). The experimental process is conducted on three publically available datasets and achieved an improved accuracy of 95.14, 94.89, and 95.94%, respectively. The comparison with several neural nets shows the improvement of proposed framework.     

Fuzzy entropy‐based MR brain image segmentation using modified particle swarm optimization

This article presents an image segmentation technique based on fuzzy entropy, which is applied to magnetic resonance (MR) brain images in order to detect brain tumors. The proposed method performs image segmentation based on adaptive thresholding of the input MR images. The image is classified into two membership functions (MFs) of the fuzzy region: Z‐function and S‐function. The optimal parameters of these fuzzy MFs are obtained using modified particle swarm optimization (MPSO) algorithm. The objective function for obtaining the optimal fuzzy MF parameters is considered to be the maximum fuzzy entropy. Through a number of examples, The performance is compared with existing entropy based object segmentation approaches and the superiority of the proposed method is demonstrated. The experimental results are compared with the exhaustive search method and Otsu's segmentation technique. The result shows the proposed fuzzy entropy‐based segmentation method optimized using MPSO achieves maximum entropy with proper segmentation of infected areas and with minimum computational time. © 2013 Wiley Periodicals, Inc. Int J Imaging Syst Technol, 23, 281–288, 2013     

Detection and diagnosis of meningioma brain tumor using ANFIS classifier

Tumors are formed in brain due to the uncontrolled development of cells. These tumors can be cured if it is timely detected and by proper medication. This article proposes a computer‐aided automatic detection and diagnosis of meningioma brain tumors in brain images using Adaptive Neuro Fuzzy Inference System (ANFIS) classifier. The proposed system consists of feature extraction, classification, and segmentation and diagnosis sections. In this article, Grey level Co‐occurrence Matric (GLCM) and Grid features are extracted from the brain image and these features are classified using ANFIS classifier into normal or abnormal. Then, morphological operations are used to segment the abnormal regions in brain image. Based on the location of these abnormal regions in brain tissues, the segmented tumor regions are diagnosed.     

Tumor detection in T1, T2, FLAIR and MPR brain images using a combination of optimization and fuzzy clustering improved by seed‐based region growing algorithm

Tumor and Edema region present in Magnetic Resonance (MR) brain image can be segmented using Optimization and Clustering merged with seed‐based region growing algorithm. The proposed algorithm shows effectiveness in tumor detection in T1 ‐ w, T2 – w, Fluid Attenuated Inversion Recovery and Multiplanar Reconstruction type MR brain images. After an initial level segmentation exhibited by Modified Particle Swarm Optimization (MPSO) and Fuzzy C – Means (FCM) algorithm, the seed points are initialized using the region growing algorithm and based on these seed points; tumor detection in MR brain images is done. The parameters taken for comparison with the conventional techniques are Mean Square Error, Peak Signal to Noise Ratio, Jaccard (Tanimoto) index, Dice Overlap indices and Computational Time. These parameters prove the efficacy of the proposed algorithm. Heterogeneous type tumor regions present in the input MR brain images are segmented using the proposed algorithm. Furthermore, the algorithm shows augmentation in the process of brain tumor identification. Availability of gold standard images has led to the comparison of the suggested algorithm with MPSO‐based FCM and conventional Region Growing algorithm. Also, the algorithm recommended through this research is capable of producing Similarity Index value of 0.96, Overlap Fraction value of 0.97 and Extra Fraction value of 0.05, which are far better than the values articulated by MPSO‐based FCM and Region Growing algorithm. The proposed algorithm favors the segmentation of contrast enhanced images. © 2017 Wiley Periodicals, Inc. Int J Imaging Syst Technol, 27, 33–45, 2017     

Automatic MR-PET registration algorithm

We present an algorithm to automatically register magnetic resonance (MR) and positron emission tomographic (PET) images of the human brain. Our algorithm takes an integrated approach: we simultaneously segment the brain in both modalities and register the slices. The algorithm does not attempt to remove the skull from the MR image, but rather uses “templates” constructed from PET images to locate the boundary between the brain and the surrounding tissue in the MR images. The PET templates are a sequence of estimates of the boundary of the brain in the PET images. For each of the templates, the registration algorithm aligns the MR and PET images by minimizing an energy function. The energy function is designed to implicitly model the relevant anatomical structure in the MR image. The template with the lowest energy after registration is the PET brain boundary. The alignment of this template in the MR image marks the MR brain boundary and gives the transformation between the two images. © 1998 John Wiley & Sons, Inc. Int J Imaging Syst Technol, 9, 46–50, 1998     

Optical and MRI multifunctional nanoprobe for targeting gliomas

A multifunctional nanoprobe capable of targeting glioma cells, detectable by both magnetic resonance imaging and fluorescence microscopy, was developed. The nanoprobe was synthesized by coating iron oxide nanoparticles with covalently bound bifunctional poly(ethylene glycol) (PEG) polymer, which were subsequently functionalized with chlorotoxin and the near-infrared fluorescing molecule Cy5.5. Both MR imaging and fluorescence microscopy showed significant preferential uptake of the nanoparticle conjugates by glioma cells. Such a nanoprobe could potentially be used to image resections of glioma brain tumors in real time and to correlate preoperative diagnostic images with intraoperative pathology at cellular-level resolution.     

Performance analysis of computer aided brain tumor detection system using ANFIS classifier

The abrupt changes in brain cells due to the environmental effects or genetic disorders leads to form the abnormal lesions in brain. These abnormal lesions are combined as mass and known as tumor. The detection of these tumor cells in brain image is a complex task due to the similarities between normal cells and tumor cells. In this paper, an automated brain tumor detection and segmentation methodology is proposed. The proposed method consists of feature extraction, classification and segmentation. In this paper, Grey Level Co‐Occurrence Matrix (GLCM), Discrete Wavelet Transform (DWT) and Law's texture features are used as features. These features are fed to Adaptive Neuro Fuzzy Inference System (ANFIS) classifier as input pattern, which classifies the brain image. Morphological operations are now applied on the classified abnormal brain image to segment the tumor regions. The proposed system achieves 95.07% of sensitivity, 99.84% of specificity and 99.80% of accuracy for tumor segmentation.     

A fast and efficient computer aided diagnostic system to detect tumor from brain magnetic resonance imaging

In this work, a simple and efficient CAD (computer‐aided diagnostic) system is proposed for tumor detection from brain magnetic resonance imaging (MRI). Poor contrast MR images are preprocessed by using morphological operations and DSR (dynamic stochastic resonance) technique. The appropriate segmentation of MR images plays an important role in yielding the correct detection of tumor. On examination of three views of brain MRI, it was visible that the region of interest (ROI) lies in the middle and its size ranges from 240 × 240 mm² to 280 × 280 mm². The proposed system makes effective use of this information and identifies four blocks from the desired ROI through block‐based segmentation. Texture and shape features are extracted for each block of all MRIs in the training set. The range of these feature values defines the threshold to distinguish tumorous and nontumorous MRIs. Features of each block of an MRI view are checked against the threshold. For a particular feature, if a block is found tumorous in a view, then the other views are also checked for the presence of tumor. If corresponding blocks in all the views are found to be tumorous, then the MRI is classified as tumorous. This selective block processing technique improves computational efficiency of the system. The proposed technique is well adaptive and fast, and it is compared with well‐known existing techniques, like k‐means, fuzzy c‐means, etc. The performance analysis based on accuracy and precision parameters emphasizes the effectiveness and efficiency of the proposed work.     

A fully automated hybrid methodology using Cuckoo‐based fuzzy clustering technique for magnetic resonance brain image segmentation

This article aims at developing an automated hybrid algorithm using Cuckoo Based Search (CBS) and interval type‐2 fuzzy based clustering, so as to exhibit efficient magnetic resonance (MR) brain image segmentation. An automatic MR brain image segmentation facilitates and enables a radiologist to have a brief review and easy analysis of complicated tumor regions of imprecise gray level regions with minimal user interface. The tumor region having severe intensity variations and suffering from poor boundaries are to be detected by the proposed hybrid technique that could ease the process of clinical diagnosis and this tends to be the core subject of this article. The ability of the proposed technique is compared using standard comparison parameters such as mean squared error, peak signal to noise ratio, computational time, Dice Overlap Index, and Jaccard T animoto C oefficient Index. The proposed CBS combined with interval type‐2 fuzzy based clustering produces a sensitivity of 0.7143 and specificity of 0.9375, which are far better than the conventional techniques such as kernel based, entropy based, graph‐cut based, and self‐organizing maps based clustering. Appreciable segmentation results of tumor region that enhances clinical diagnosis is made available through this article and two of the radiologists who have hands on experience in the field of radiology have extended their support in validating the efficiency of the proposed methodology and have given their consent in utilizing the proposed methodology in the processes of clinical oncology.     

A new rectangular window based image cropping method for generalization of brain neoplasm classification systems

Classification of brain neoplasm images is one of the most challenging research areas in the field of medical image processing. The main objective of this study is to design a brain neoplasm classification system that can be trained using multiple various sized MR images of different institutions. The proposed method is a generalized classification system; it can be used in a single institute or in a number of institutions at the same time, without any restriction on image size. The generalization and unbiased capability of the proposed method can bring researchers on a single platform to work on some standard forms of computer aided diagnosis system with more efficient diagnostic capabilities. In this study, a suitable size of moveable rectangular window is used between segmentation and feature extraction stages. A semiautomatic, localized region based active contour method is used for segmentation of brain neoplasm region. Discrete wavelet transform for feature extraction, principal component analysis for feature selection and support vector machine is used as classifier. For the first time MR images of 2 sizes and from different institutions are used in training and testing of brain neoplasm classifier. Three glioma grades were classified using 92 MR images. The proposed method achieved the highest accuracy of 88.26%, the highest sensitivity of 92.23% and the maximum specificity of 93.93%. In addition, the proposed method is computationally less complex, requires shorter processing time and is more efficient in terms of storage capacity.