Effects of chlorophyll fluorescence on the estimation of microphytobenthos biomass using spectral reflectance indices

The communities of benthic microalgae that form dense biofilms at the surface of aquatic sediments, or microphytobenthos, are important primary producers in estuarine intertidal flats and shallow coastal waters. The microalgal biomass present in the photic zone of the sediment is a key parameter for ecological and photophysiological studies on microphytobenthos, and has been routinely estimated using hyperspectral reflectance indices based on the chlorophyll (Chl) a red absorption peak at 675 nm, usually the Normalised Difference Vegetation Index (NDVI). This study reports that red region-based biomass indices measured on microphytobenthos biofilms can be significantly affected by the enrichment of reflected light with solar-induced Chl fluorescence emitted by the microalgae. Chl fluorescence emission peaks at 683 nm, counterbalancing the decrease in reflectance centered at 675 nm, thus causing the underestimation of NDVI. The interference of Chl fluorescence was found to be easily identified by a conspicuous double-peak feature in the 670-700 nm region of the second-derivative reflectance spectra. The fluorescence-induced NDVI underestimation was shown to be most pronounced for high surface biomass levels and low incident solar irradiance. Particular aspects of microphytobenthos biofilms, such as the increase in surface Chl fluorescence due the contribution of emission by subsurface layers, and vertical migratory responses by motile microalgae to changes in ambient light, further complicate the effects on biomass estimation using NDVI-like indices. By comparing NDVI with a fluorescence-independent biomass index for a wide range of natural light conditions, it was found that Chl fluorescence interference may cause the underestimation of microalgal biomass to reach over 25%, with errors above 10% being expected for more than half of the measuring occasions. These results indicate that the use of NDVI may compromise the correct assessment of important aspects of microphytobenthos ecology, such as the characterisation of migratory behaviour or the determination of biomass-specific productivity rates, and call for the use of alternative biomass indices, not based on the Chl a red absorption peak.     

Responses of the reflectance indices PRI and NDVI to experimental warming and drought in European shrublands along a north-south climatic gradient

The aim of this study was to evaluate the use of ground-based canopy reflectance measurements to detect changes in physiology and structure of vegetation in response to experimental warming and drought treatment at six European shrublands located along a North-South climatic gradient. We measured canopy reflectance, effective green leaf area index (green LAIe) and chlorophyll fluorescence of dominant species. The treatment effects on green LAIe varied among sites. We calculated three reflectance indices: photochemical reflectance index PRI [531 nm; 570 nm], normalized difference vegetation index NDVI₆₈₀ [780 nm; 680 nm] using red spectral region, and NDVI₅₇₀ [780 nm; 570 nm] using the same green spectral region as PRI. All three reflectance indices were significantly related to green LAIe and were able to detect changes in shrubland vegetation among treatments. In general warming treatment increased PRI and drought treatment reduced NDVI values. The significant treatment effect on photochemical efficiency of plants detected with PRI could not be detected by fluorescence measurements. However, we found canopy level measured PRI to be very sensitive to soil reflectance properties especially in vegetation areas with low green LAIe. As both soil reflectance and LAI varied between northern and southern sites it is problematic to draw universal conclusions of climate-derived changes in all vegetation types based merely on PRI measurements. We propose that canopy level PRI measurements can be more useful in areas of dense vegetation and dark soils.     

An evaluation of EO-1 hyperspectral Hyperion data for chlorophyll content and leaf area index estimation

Estimation of chlorophyll content and the leaf area index (LAI) using remote sensing technology is of particular use in precision agriculture. Wavelengths at the red edge of the vegetation spectrum (705 and 750 nm) were selected to test vegetation indices (VIs) using spaceborne hyperspectral Hyperion data for the estimation of chlorophyll content and LAI in different canopy structures. Thirty sites were selected for the ground data collection. The results show that chlorophyll content and LAI can be successfully estimated by VIs derived from Hyperion data with a root mean square error (RMSE) of 7.20–10.49 μg cm^?2 for chlorophyll content and 0.55–0.77 m² m^?2 for LAI. The special index derived from three bands provided the best estimation of the chlorophyll content (RMSE of 7.19 μg cm^?2 for the Modified Chlorophyll Absorption Ratio Index/Optimized Soil-Adjusted Vegetation Index (MCARI/OSAVI₇₀₅)) and LAI (RMSE of 0.55 m² m^?2 for a second form of the MCARI (MCARI2₇₀₅)). These results demonstrate the possibilities for analysing the variation in chlorophyll content and LAI using hyperspectral Hyperion data with bands from the red edge of the vegetation spectrum.     

Critical assessment of vegetation indices from AVHRR in a semi-arid environment

The most frequently used vegetation index (VI), the Normalized Difference Vegetation Index (NDVI) and its variants introduced recently to correct for atmospheric and soil optical response such as Global Environment Monitoring Index (GEMI) and Modified Soil-Adjusted Vegetation Index (MSAVI) are evaluated over a Sahelian region. The usefulness and limitations of the various vegetation indices are discussed, with special attention to cloud contamination and green vegetation detection from space. The HAPEX Sahel database is used as a test case to compare these indices in arid and semi-arid environments. Selected sites are characterized by sparse vegetation cover and day-to-day variability in atmospheric composition. Simulated indices values behaviour at the surface level shows that these VIs were all sensitive to the presence of green vegetation but were affected differently by changes in soil colour and brightness. We showed that GEMI is less sensitive to atmospheric variations than both NDVI and MSAVI since it exhibits a high atmospheric transmissivity over its entire range for various atmospheric aerosol loadings and water vapour contents. These results were first tested on a vegetation gradient, and secondly evaluated on a transect which encompasses various soils formations. On the vegetation gradient, it was found that GEMI computed from measurements at the top of the atmosphere is invariable from one day to the next. On the bare soils transect, MSAVI calculated at the surface level, has shown a great insensitivity to soil optical responses modifications, while GEMI exhibits from space noticeable variability in this bright soil context. Finally, it was illustrated that GEMI exhibits interesting properties for cloud detection because of the strong decrease of its value on cloudy pixels.     

Red edge spectral measurements from sugar maple leaves

Many sugar maple stands in the northeastern United States experienced extensive insect damage during the 1988 growing season. Chlorophyll data and high spectral resolution spectrometer laboratory reflectance data were acquired for multiple collections of single detached sugar maple leaves variously affected by the insect over the 1988 growing season. Reflectance data indicated consistent and diagnostic differences in the red edge portion (680-750 nm) of the spectrum among the various samples and populations of leaves. These included differences in the red edge inflection point (REIP), a ratio of reflectance at 740-720 nm (RE3/RE2), and a ratio of first derivative values at 715-705 nm (D715/D705), All three red edge parameters were highly correlated with variation in total chlorophyll content. Other spectral measures, including the Normalized Difference Vegetation Index (NDVI) and the Simple Vegetation Index Ratio (VI), also varied among populations and over the growing season, but did not correlate well with total chlorophyll content. Leaf stacking studies on light and dark backgrounds indicated REIP, RE3/RE2 and D715/D705 to be much less influenced by differences in green leaf biomass and background condition than either NDVI or VI.     

Modelling above-ground biomass based on vegetation indexes: a modified approach for biomass estimation in semi-arid grasslands

Remote sensing could be the most effective means for scaling up grassland above-ground biomass (AGB) from the sample scale to the regional scale. Remote sensing approaches using statistical models based on vegetation indexes (VIs) are frequently used because of their simplicity and reliability. And many researchers have already proven the method is scientific, feasible, and can bring relatively better effects in practice. However, the only deficiency of the method has been criticized because of the uncertainties introduced by saturation of spectral reflectance at high-density vegetation levels and the soil surface at low-density vegetation levels. Therefore, in this study, we aimed to improve grassland AGB estimates by using modified VIs (MVIs) to minimize the influence of the soil background. The field study was conducted in the Chen Barag Banner, the Ewenkizu Banner, and the Xin Barag Left Banner in the Hulun Buir Grassland, Inner Mongolia, northern China. Field plots were photographed and AGB samples were collected during field sampling. Remote sensing data were obtained from MOD09A1 (TERRA satellite). Four MVIs were first calculated based on the corresponding VI: the Ratio Vegetation Index (RVI), the Normalized Differential Vegetation Index (NDVI), the Difference Vegetation Index (DVI), and the Modified Soil-Adjusted Vegetation Index (MSAVI), by improving estimates of vegetation cover (VC). Then, MVIs, i.e., MRVI, MDVI, MNDVI, and MMSAVI, were regressed with the sample-scale AGB using an exponential function, a linear function, a logarithmic function, and a power function. When the accuracy of the models was tested by comparing root mean square error (RMSE), relative error (RE), and coefficient of determination (R²), the results demonstrated that MVI-AGB models performed better than the VI-AGB models. The logarithmic MNDVI-AGB model was the best of the regression functions. This model gave the best estimates of AGB from remote sensing data, compared with the values measured in field analyses. Our proposed method provides a new way to estimate regional grassland AGB and will be useful to analyze ecosystem responses under climate change.     

Assessing vegetation condition in the presence of biomass burning smoke by applying the Aerosol‐free Vegetation Index (AFRI) on MODIS images

Vegetation indices (VIs) such as the Normalized Difference Vegetation Index (NDVI) are widely used for assessing vegetation cover and condition. One of the NDVI's significant disadvantages is its sensitivity to aerosols in the atmosphere, hence several atmospherically resistant VIs were formulated using the difference in the radiance between the blue and the red spectral bands. The state‐of‐the‐art atmospherically resistant VI, which is a standard Moderate Resolution Imaging Spectroradiometer (MODIS) product, together with the NDVI, is the Enhanced Vegetation Index (EVI). A different approach introduced the Aerosol‐free Vegetation Index (AFRI) that is based on the correlation between the shortwave infrared (SWIR) and the visible red bands. The AFRI main advantage is in penetrating an opaque atmosphere influenced by biomass burning smoke, without the need for explicit correction for the aerosol effect. The objective of this research was to compare the performance of these three VIs under smoke conditions. The AFRI was applied to the 2.1 µm SWIR channel of the MODIS sensor onboard the Earth Observing System (EOS) Terra and Aqua satellites in order to assess its functionality on these imaging platforms. The AFRI performance was compared with those of NDVI and EVI. All VIs were calculated on images with and without present smoke, using the surface‐reflectance MODIS product, for three case studies of fires in Arizona, California, and Zambia. The MODIS Fire Product was embedded on the images in order to identify the exact location of the active fires. Although good correlations were observed between all VIs in the absence of smoke (in the Arizona case R ² = 0.86, 0.77, 0.88 for the NDVI–EVI, AFRI–EVI, and AFRI–NDVI, respectively) under smoke conditions a high correlation was maintained between the NDVI and the EVI, while low correlations were found for the AFRI–EVI and AFRI–NDVI (0.21 and 0.16, for the Arizona case, respectively). A time series of MODIS images recorded over Zambia during the summer of 2000 was tested and showed high NDVI fluctuations during the study period due to oscillations in aerosol optical thickness values despite application of aerosol corrections on the images. In contrast, the AFRI showed smoother variations and managed to better assess the vegetation condition. It is concluded that, beneath the biomass burning smoke, the AFRI is more effective than the EVI in observing the vegetation conditions.     

The impact of soil reflectance on the quantification of the green vegetation fraction from NDVI

The green vegetation fraction (Fg) is an important climate and hydrologic model parameter. A common method to calculate Fg is to create a simple linear mixing model between two NDVI endmembers: bare soil NDVI (NDVI_o) and full vegetation NDVI (NDVI_∞). Usually it is assumed that NDVI_o is close to zero (NDVI_o ∼ 0.05) and is generally chosen from the lowest observed NDVI values. However, the mean soil NDVI computed from 2906 samples is much larger (NDVI = 0.2) and is highly variable (standard deviation = 0.1). We show that the underestimation of NDVI_o yields overestimations of Fg. The largest errors occur in grassland and shrubland areas. Using parameters for NDVI_o and NDVI_∞ derived from global scenes yields overestimations of Fg that are larger than 0.2 for the majority of U.S. land cover types when pixel NDVI values are 0.2 < NDVI_pixel < 0.4. When using conterminous U.S. scenes to derive NDVI_o and NDVI_∞, the overestimation is less (0.10-0.17 for 0.2 < NDVI_pixel < 0.4). As a result, parts of the conterminous U.S. are affected at different times of the year depending on the local seasonal NDVI cycle. We propose using global databases of NDVI_o along with information on historical NDVI_pixel values to compute a statistically most-likely estimate of Fg. Using in situ measurements made at the Sevilleta LTER, we show that this approach yields better estimates of Fg than using global invariant NDVI_o values estimated from whole scenes. At the two studied sites, the Fg estimate was adjusted by 52% at the grassland and 86% at the shrubland. More significant advances will require information on spatial distribution of soil reflectance.     

Broadband, red-edge information from satellites improves early stress detection in a New Mexico conifer woodland

Multiple plant stresses can affect the health, esthetic condition, and timber harvest value of conifer forests. To monitor spatial and temporal dynamic forest stress conditions, timely, accurate, and cost-effective information is needed that could be provided by remote sensing. Recently, satellite imagery has become available via the RapidEye satellite constellation to provide spectral information in five broad bands, including the red-edge region (690-730 nm) of the electromagnetic spectrum. We tested the hypothesis that broadband, red-edge satellite information improves early detection of stress (as manifest by shifts in foliar chlorophyll a + b) in a woodland ecosystem relative to other more commonly utilized band combinations of red, green, blue, and near infrared band reflectance spectra. We analyzed a temporally dense time series of 22 RapidEye scenes of a piñon-juniper woodland in central New Mexico acquired before and after stress was induced by girdling. We found that the Normalized Difference Red-Edge index (NDRE) allowed stress to be detected 13 days after girdling — between and 16 days earlier than broadband spectral indices such as the Normalized Difference Vegetation Index (NDVI) and Green NDVI traditionally used for satellite based forest health monitoring. We conclude that red-edge information has the potential to considerably improve forest stress monitoring from satellites and warrants further investigation in other forested ecosystems.     

Assessing the seasonal dynamics of the Brazilian Cerrado vegetation through the use of spectral vegetation indices

In this study, the response of vegetation indices (VIs) to the seasonal patterns and spatial distribution of the major vegetation types encountered in the Brazilian Cerrado was investigated. The Cerrado represents the second largest biome in South America and is the most severely threatened biome as a result of rapid land conversions. Our goal was to assess the capability of VIs to effectively monitor the Cerrado and to discriminate among the major types of Cerrado vegetation. A full hydrologic year (1995) of composited AVHRR, local area coverage (LAC) data was converted to Normalized Difference Vegetation Index (NDVI) and Soil Adjusted Vegetation Index (SAVI) values. Temporal extracts were then made over the major Cerrado vegetation communities. Both the NDVI and SAVI temporal profiles corresponded well to the phenological patterns of the natural and converted vegetation formations and depicted three major categories encompassing the savanna formations and pasture sites, the forested areas, and the agricultural crops. Secondary differences in the NDVI and SAVI temporal responses were found to be related to their unique interactions with sun-sensor viewing geometries. An assessment of the functional behaviour of the VIs confirmed SAVI responds primarily to NIR variations, while the NDVI showed a strong dependence on the red reflectance. Based on these results, we expect operational use of the MODIS Enhanced Vegetation Index (EVI) to provide improved discrimination and monitoring capability of the significant Cerrado vegetation types.     

Response of spectral vegetation indices to soil moisture in grasslands and shrublands

The relationships between satellite-derived vegetation indices (VIs) and soil moisture are complicated because of the time lag of the vegetation response to soil moisture. In this study, we used a distributed lag regression model to evaluate the lag responses of VIs to soil moisture for grasslands and shrublands at Soil Climate Analysis Network sites in the central and western United States. We examined the relationships between Moderate Resolution Imaging Spectroradiometer (MODIS)-derived VIs and soil moisture measurements. The Normalized Difference Vegetation Index (NDVI) and Normalized Difference Water Index (NDWI) showed significant lag responses to soil moisture. The lag length varies from 8 to 56 days for NDVI and from 16 to 56 days for NDWI. However, the lag response of NDVI and NDWI to soil moisture varied among the sites. Our study suggests that the lag effect needs to be taken into consideration when the VIs are used to estimate soil moisture.     

Quantification of aboveground rangeland productivity and anthropogenic degradation on the Arabian Peninsula using Landsat imagery and field inventory data

The productivity of semi-arid rangelands on the Arabian Peninsula is spatially and temporally highly variable, and increasing grazing pressure as well as the likely effects of climatic change further threatens vegetation resources. Using the Al Jabal al Akhdar mountains in northern Oman as an example, our objectives were to analyse the availability and spatial distribution of aboveground net primary production (ANPP) and the extent and causes of vegetation changes during the last decades with a remote sensing approach. A combination of destructive and non-destructive biomass measurements by life-form specific allometric equations was used to identify the ANPP of the ground vegetation (< 50 cm) and the leaf and twig biomass of phanerophytes. The ANPP differed significantly among the life forms and the different plant communities, and the biomass of the sparsely vegetated ground was more than 50 times lower (mean = 0.22 t DM ha^− 1) than the biomass of phanerophytes (mean = 12.3 t DM ha^− 1). Among the different vegetation indices calculated NDVI proved to be the best predictor for rangeland biomass.Temporal trend analysis of Landsat satellite images from 1986 to 2009 was conducted using a pixel-based least square regression with the annual maximum Normalized Differenced Vegetation Index (NDVI_max) as a dependent variable. Additionally, linear relationships of NDVI_max and annual rainfall along the time series were calculated. The extent of human-induced changes was analysed using the residual trends method. A strongly significant negative biomass trend detected for 83% of the study area reflected a decrease in annual rainfall but even without clear evidence of deforestation of trees and shrubs, human-induced vegetation degradation due to settlement activities were also important.     

Monitoring herbaceous fuel moisture content with SPOT VEGETATION time-series for fire risk prediction in savanna ecosystems

This paper evaluated the capacity of SPOT VEGETATION time-series to monitor herbaceous fuel moisture content (FMC) in order to improve fire risk assessment in the savanna ecosystem of Kruger National Park in South Africa. In situ herbaceous FMC data were used to assess the Normalized Difference Vegetation Index (NDVI), Normalized Difference Water Index (NDWI), Vegetation Dryness Index (VDI), Improved VDI (IVDI), and Accumulated Relative NDVI Decrement (ARND) during the dry season. The effect of increasing amounts of dead vegetation on the monitoring capacity of derived indices was studied by sampling mixed live and dead FMC. The IVDI was proposed as an improvement of the VDI to monitor herbaceous FMC during the dry season. The IVDI is derived by replacing NDVI with the integrated Relative Vegetation Index (iRVI), as an approximation of yearly herbaceous biomass, when analyzing the 2-dimensional space with NDWI. It was shown that the iRVI offered more information than the NDVI in combination with NDWI to monitor FMC. The VDI and IVDI exhibited a significant relation to FMC with R² of 0.25 and 0.73, respectively. The NDWI, however, correlated best with FMC (R² = 0.75), while the correlation of ARND and FMC was weaker (R² = 0.60) than that found for NDVI, NDWI, and IVDI. The use of in situ herbaceous FMC consequently indicated that NDWI is appropriate as spatio-temporal information source of herbaceous FMC variation which can be used to optimize fire risk and behavior assessment for fire management in savanna ecosystems.     

Retrieval of Leaf area index and stress conditions for Sundarban mangroves using Sentinel-2 data

ABSTRACT

The potential of Sentinel-2 (S2) data in mapping Leaf area index (LAI) of mangroves having heterogeneous species composition, variable canopy density, and complex backgrounds was studied. Out of the three available near-infrared bands in S2, band-8 of 10 m spatial resolution was found to be the most suitable one for deriving the Normalized Difference Vegetation Index (NDVI) for mangroves. The LAI-NDVI relation did not accord apparently with the earlier reports and the underlying complex background effect was validated with Airborne Visible Infrared Imaging Spectrometer-Next Generation (AVIRIS-NG) hyperspectral data. It simulated spectral and spatial conditions of S2 by linear mixing of canopy and background that confirmed the effect of background contributions to the canopy reflectance decorrelating the NDVI from LAI. The compensation for diverse backgrounds was accomplished with optimum-scaled NDVI (scNDVI_m) obtained from the mean of scaled NDVIs derived with different backgrounds in the mangroves. LAI was well correlated with composite NDVI (NDVI_com), derived empirically from the most appropriate NDVI (NDVI_S2) and scNDVI_m where ground observation controlled the threshold arbitration in extracting the range of scNDVI_m. It was shown that an improved LAI estimate with a coefficient of determination (R²) of 0.69 and root-mean-square error (RMSE) of 0.02 could be obtained with NDVI_com. This method has the advantage of compensating the contaminations due to background reflectance. While the relation between LAI and NDVI_com was found to be consistent, the application of the same methodology in similar mangroves should be site-specific with ample ground observation. The fusion of NDVI and scNDVI obtained from S2 yields better LAI retrieval for mixed mangroves, such as that of Sundarban.     

Effects of soil composition and mineralogy on remote sensing of crop residue cover

The management of crop residues (non-photosynthetic vegetation) in agricultural fields influences soil erosion and soil carbon sequestration. Remote sensing methods can efficiently assess crop residue cover and related tillage intensity over many fields in a region. Although the reflectance spectra of soils and crop residues are often similar in the visible, near infrared, and the lower part of the shortwave infrared (400-1900 nm) wavelength region, specific diagnostic chemical absorption features are evident in the upper shortwave infrared (1900-2500 nm) region. Two reflectance band height indices used for estimating residue cover are the Cellulose Absorption Index (CAI) and the Lignin-Cellulose Absorption (LCA) index, both of which use reflectances in the upper shortwave infrared (SWIR). Soil mineralogy and composition will affect soil spectral properties and may limit the usefulness of these spectral indices in certain areas. Our objectives were to (1) identify minerals and soil components with absorption features in the 2000 nm to 2400 nm wavelength region that would affect CAI and LCA and (2) assess their potential impact on remote sensing estimates of crop residue cover. Most common soil minerals had CAI values ≤ 0.5, whereas crop residues were always > 0.5, allowing for good contrast between soils and residues. However, a number of common soil minerals had LCA values > 0.5, and, in some cases, the mineral LCA values were greater than those of the crop residues, which could limit the effectiveness of LCA for residue cover estimation. The LCA of some dry residues and live corn canopies were similar in value, unlike CAI. Thus, the Normalized Difference Vegetation Index (NDVI) or similar method should be used to separate out green vegetation pixels. Mineral groups, such as garnets and chlorites, often have wide ranges of CAI and LCA values, and thus, mineralogical analyses often do not identify individual mineral species required for precise CAI estimation. However, these methods are still useful for identifying mineral soils requiring additional scrutiny. Future advanced multi- and hyperspectral remote sensing platforms should include CAI bands to allow for crop residue cover estimation.     

Spatial non-stationarity and scale-dependency of prediction accuracy in the remote estimation of LAI over a tropical rainforest in Sulawesi, Indonesia

The technique of Geographically Weighted Regression (GWR) was used for estimation of Leaf Area Index (LAI) from remote sensing-based multi-spectral vegetation indices (VI) such as Normalized Difference Vegetation Index (NDVI), the mid-infrared corrected Normalized Difference Vegetation Index (NDVIc), Simple Ratio (SR), Soil-Adjusted Vegetation Index (SAVI) and Reduced Simple Ratio (RSR) in a region of equatorial rainforest in Central Sulavesi, Indonesia. The linear regressions between NDVI, NDVIc, SR, SAVI and RSR as explanatory variables and ground measurements of LAI at 166 plots as a dependent variable were produced using common modelling approach — Ordinary Least Squares (OLS) regression fitted to all data points, as well as GWR. Accuracy and precision statistics indicate that the GWR method made significantly better predictions of LAI in all simulations than OLS did. The relationships between LAI and the explanatory variables were found to be significantly spatially variable and scale-dependent. GWR has the potential to reveal local patterns in the spatial distribution of parameter estimates, it demonstrated sensitivity of the model's accuracy and performance to scale variation. The GWR approach enables finding the most appropriate scale for data analysis. This scale was different for each VI. The results suggest that spatial non-stationarity and scale-dependency in the relationship between LAI and remote sensing data has important implications for estimations of LAI based on empirical transfer functions.     

Air temperature estimation with MSG-SEVIRI data: Calibration and validation of the TVX algorithm for the Iberian Peninsula

Air temperature can be estimated from remote sensing by combining information in thermal infrared and optical wavelengths. The empirical TVX algorithm is based on an estimated linear relationship between observed Land Surface Temperature (LST) and a Spectral Vegetation Index (NDVI). Air temperature is assumed to be equal to the LST corresponding to the effective full vegetation cover, and is found by extrapolating the line to a maximum value of NDVI_max. The algorithm has been tested and reported in the literature previously. However, the effect of vegetation types and climates and the potential variation in NDVI of the effective full cover has not been subject for investigation. The present study proposes a novel methodology to estimate NDVI_max that uses observed air temperature to calibrate the NDVI_max for each vegetation type. To assess the validity of this methodology, we have compared the accuracy of estimates using the new NDVI_max and the previous NDVI_max that have been proposed in literature with MSG-SEVIRI images in Spain during the year 2005. In addition, a spatio-temporal assessment of residuals has been performed to evaluate the accuracy of retrievals in terms of daily and seasonal variation, land cover, landscape heterogeneity and topography. Results showed that the new calibrated NDVI_max perform well, with a Mean Absolute Error ranging between 2.8 °C and 4 °C. In addition, vegetation-specific NDVI_max improve the accuracy compared with a unique NDVI_max.     

Hyperspectral vegetation indices and novel algorithms for predicting green LAI of crop canopies: Modeling and validation in the context of precision agriculture

A growing number of studies have focused on evaluating spectral indices in terms of their sensitivity to vegetation biophysical parameters, as well as to external factors affecting canopy reflectance. In this context, leaf and canopy radiative transfer models are valuable for modeling and understanding the behavior of such indices. In the present work, PROSPECT and SAILH models have been used to simulate a wide range of crop canopy reflectances in an attempt to study the sensitivity of a set of vegetation indices to green leaf area index (LAI), and to modify some of them in order to enhance their responsivity to LAI variations. The aim of the paper was to present a method for minimizing the effect of leaf chlorophyll content on the prediction of green LAI, and to develop new algorithms that adequately predict the LAI of crop canopies. Analyses based on both simulated and real hyperspectral data were carried out to compare performances of existing vegetation indices (Normalized Difference Vegetation Index [NDVI], Renormalized Difference Vegetation Index [RDVI], Modified Simple Ratio [MSR], Soil-Adjusted Vegetation Index [SAVI], Soil and Atmospherically Resistant Vegetation Index [SARVI], MSAVI, Triangular Vegetation Index [TVI], and Modified Chlorophyll Absorption Ratio Index [MCARI]) and to design new ones (MTVI1, MCARI1, MTVI2, and MCARI2) that are both less sensitive to chlorophyll content variations and linearly related to green LAI. Thorough analyses showed that the above existing vegetation indices were either sensitive to chlorophyll concentration changes or affected by saturation at high LAI levels. Conversely, two of the spectral indices developed as a part of this study, a modified triangular vegetation index (MTVI2) and a modified chlorophyll absorption ratio index (MCARI2), proved to be the best predictors of green LAI. Related predictive algorithms were tested on CASI (Compact Airborne Spectrographic Imager) hyperspectral images and, then, validated using ground truth measurements. The latter were collected simultaneously with image acquisition for different crop types (soybean, corn, and wheat), at different growth stages, and under various fertilization treatments. Prediction power analysis of proposed algorithms based on MCARI2 and MTVI2 resulted in agreements between modeled and ground measurement of non-destructive LAI, with coefficients of determination (r²) being 0.98 for soybean, 0.89 for corn, and 0.74 for wheat. The corresponding RMSE for LAI were estimated at 0.28, 0.46, and 0.85, respectively.     

Nondestructive estimation of canopy chlorophyll content using Hyperion and Landsat/TM images

Remote sensing offers a nondestructive tool for the quick and precise estimation of canopy chlorophyll content that serves as an important indicator of the plant ecosystem. In this study, the canopy chlorophyll content of 26 samples in 2007 and 40 samples in 2008 of maize were nondestructively estimated by a set of vegetation indices (VIs; Normalized Difference Vegetation Index, NDVI; Green Chlorophyll Index, CI_green; modified soil adjust vegetation index, MSAVI; and Enhanced Vegetation Index, EVI) derived from the hyperspectral Hyperion and Thematic Mapper (TM) images. The PROSPECT model was used for sensitivity analysis among the indices and results indicated that CI_green had a large linear correlation with chlorophyll content ranging from 100–1000 mg m^?2. EVI showed a moderate ability in avoiding saturation and reached a saturation of chlorophyll content above 600 mg m^?2. Both of the other two indices, MSAVI and NDVI, showed a clear saturation at chlorophyll content of 400 mg m^?2, which demonstrated they may be inappropriate for chlorophyll interpretation at high values. A validation study was also conducted with satellite observations (Hyperion and TM) and in-situ measurements of chlorophyll content in maize. Results indicated that canopy chlorophyll content can be remotely evaluated by VIs with r ² ranging from the lowest of 0.73 for NDVI to the highest of 0.86 for CI_green. EVI had a greater precision (r ²=0.81) than MASVI (r ²=0.75) in canopy chlorophyll content estimation. The results agreed well with the sensitivity study and will be helpful in developing future models for canopy chlorophyll evaluation.