On voting-based consensus of cluster ensembles

Voting-based consensus clustering refers to a distinct class of consensus methods in which the cluster label mismatch problem is explicitly addressed. The voting problem is defined as the problem of finding the optimal relabeling of a given partition with respect to a reference partition. It is commonly formulated as a weighted bipartite matching problem. In this paper, we present a more general formulation of the voting problem as a regression problem with multiple-response and multiple-input variables. We show that a recently introduced cumulative voting scheme is a special case corresponding to a linear regression method. We use a randomized ensemble generation technique, where an overproduced number of clusters is randomly selected for each ensemble partition. We apply an information theoretic algorithm for extracting the consensus clustering from the aggregated ensemble representation and for estimating the number of clusters. We apply it in conjunction with bipartite matching and cumulative voting. We present empirical evidence showing substantial improvements in clustering accuracy, stability, and estimation of the true number of clusters based on cumulative voting. The improvements are achieved in comparison to consensus algorithms based on bipartite matching, which perform very poorly with the chosen ensemble generation technique, and also to other recent consensus algorithms.     

Particle Swarm Clustering in clustering ensembles: Exploiting pruning and alignment free consensus

A clustering ensemble combines in a consensus function the partitions generated by a set of independent base clusterers. In this study both the employment of particle swarm clustering (PSC) and ensemble pruning (i.e., selective reduction of base partitions) using evolutionary techniques in the design of the consensus function is investigated. In the proposed ensemble, PSC plays two roles. First, it is used as a base clusterer. Second, it is employed in the consensus function; arguably the most challenging element of the ensemble. The proposed consensus function exploits a representation for the base partitions that makes cluster alignment unnecessary, allows for the combination of partitions with different number of clusters, and supports both disjoint and overlapping (fuzzy, probabilistic, and possibilistic) partitions. Results on both synthetic and real-world data sets show that the proposed ensemble can produce statistically significant better partitions, in terms of the validity indices used, than the best base partition available in the ensemble. In general, a small number of selected base partitions (below 20% of the total) yields the best results. Moreover, results produced by the proposed ensemble compare favorably to those of state-of-the-art clustering algorithms, and specially to swarm based clustering ensemble algorithms.     

Weighted partition consensus via kernels

The combination of multiple clustering results (clustering ensemble) has emerged as an important procedure to improve the quality of clustering solutions. In this paper we propose a new cluster ensemble method based on kernel functions, which introduces the Partition Relevance Analysis step. This step has the goal of analyzing the set of partition in the cluster ensemble and extract valuable information that can improve the quality of the combination process. Besides, we propose a new similarity measure between partitions proving that it is a kernel function. A new consensus function is introduced using this similarity measure and based on the idea of finding the median partition. Related to this consensus function, some theoretical results that endorse the suitability of our methods are proven. Finally, we conduct a numerical experimentation to show the behavior of our method on several databases by making a comparison with simple clustering algorithms as well as to other cluster ensemble methods.     

Clustering ensembles: models of consensus and weak partitions

Clustering ensembles have emerged as a powerful method for improving both the robustness as well as the stability of unsupervised classification solutions. However, finding a consensus clustering from multiple partitions is a difficult problem that can be approached from graph-based, combinatorial, or statistical perspectives. This study extends previous research on clustering ensembles in several respects. First, we introduce a unified representation for multiple clusterings and formulate the corresponding categorical clustering problem. Second, we propose a probabilistic model of consensus using a finite mixture of multinomial distributions in a space of clusterings. A combined partition is found as a solution to the corresponding maximum-likelihood problem using the EM algorithm. Third, we define a new consensus function that is related to the classical intraclass variance criterion using the generalized mutual information definition. Finally, we demonstrate the efficacy of combining partitions generated by weak clustering algorithms that use data projections and random data splits. A simple explanatory model is offered for the behavior of combinations of such weak clustering components. Combination accuracy is analyzed as a function of several parameters that control the power and resolution of component partitions as well as the number of partitions. We also analyze clustering ensembles with incomplete information and the effect of missing cluster labels on the quality of overall consensus. Experimental results demonstrate the effectiveness of the proposed methods on several real-world data sets.     

Exploring the diversity in cluster ensemble generation: Random sampling and random projection

Cluster ensemble first generates a large library of different clustering solutions and then combines them into a more accurate consensus clustering. It is commonly accepted that for cluster ensemble to work well the member partitions should be different from each other, and meanwhile the quality of each partition should remain at an acceptable level. Many different strategies have been used to generate different base partitions for cluster ensemble. Similar to ensemble classification, many studies have been focusing on generating different partitions of the original dataset, i.e., clustering on different subsets (e.g., obtained using random sampling) or clustering in different feature spaces (e.g., obtained using random projection). However, little attention has been paid to the diversity and quality of the partitions generated using these two approaches. In this paper, we propose a novel cluster generation method based on random sampling, which uses the nearest neighbor method to fill the category information of the missing samples (abbreviated as RS-NN). We evaluate its performance in comparison with k-means ensemble, a typical random projection method (Random Feature Subset, abbreviated as FS), and another random sampling method (Random Sampling based on Nearest Centroid, abbreviated as RS-NC). Experimental results indicate that the FS method always generates more diverse partitions while RS-NC method generates high-quality partitions. Our proposed method, RS-NN, generates base partitions with a good balance between the quality and the diversity and achieves significant improvement over alternative methods. Furthermore, to introduce more diversity, we propose a dual random sampling method which combines RS-NN and FS methods. The proposed method can achieve higher diversity with good quality on most datasets.     

基于投票机制的融合聚类算法

以一趟聚类算法作为划分数据的基本算法,讨论聚类融合问题.通过重复使用一趟聚类算法划分数据,并随机选择阈值和数据输入顺序,得到不同的聚类结果,将这些聚类结果映射为模式间的关联矩阵,在关联矩阵上使用投票机制获得最终的数据划分.在真实数据集和人造数据集上检验了提出的聚类融合算法,并与相关聚类算法进行了对比,实验结果表明,文中提出的算法是有效可行的.     

Scale-invariant clustering with minimum volume ellipsoids

This paper develops theory and algorithms concerning a new metric for clustering data. The metric minimizes the total volume of clusters, where the volume of a cluster is defined as the volume of the minimum volume ellipsoid (MVE) enclosing all data points in the cluster. This metric is scale-invariant, that is, the optimal clusters are invariant under an affine transformation of the data space. We introduce the concept of outliers in the new metric and show that the proposed method of treating outliers asymptotically recovers the data distribution when the data comes from a single multivariate Gaussian distribution. Two heuristic algorithms are presented that attempt to optimize the new metric. On a series of empirical studies with Gaussian distributed simulated data, we show that volume-based clustering outperforms well-known clustering methods such as k-means, Ward's method, SOM, and model-based clustering.     

Evaluation of stability of k-means cluster ensembles with respect to random initialization

Many clustering algorithms, including cluster ensembles, rely on a random component. Stability of the results across different runs is considered to be an asset of the algorithm. The cluster ensembles considered here are based on k-means clusterers. Each clusterer is assigned a random target number of clusters, k and is started from a random initialization. Here, we use 10 artificial and 10 real data sets to study ensemble stability with respect to random k, and random initialization. The data sets were chosen to have a small number of clusters (two to seven) and a moderate number of data points (up to a few hundred). Pairwise stability is defined as the adjusted Rand index between pairs of clusterers in the ensemble, averaged across all pairs. Nonpairwise stability is defined as the entropy of the consensus matrix of the ensemble. An experimental comparison with the stability of the standard k-means algorithm was carried out for k from 2 to 20. The results revealed that ensembles are generally more stable, markedly so for larger k. To establish whether stability can serve as a cluster validity index, we first looked at the relationship between stability and accuracy with respect to the number of clusters, k. We found that such a relationship strongly depends on the data set, varying from almost perfect positive correlation (0.97, for the glass data) to almost perfect negative correlation (-0.93, for the crabs data). We propose a new combined stability index to be the sum of the pairwise individual and ensemble stabilities. This index was found to correlate better with the ensemble accuracy. Following the hypothesis that a point of stability of a clustering algorithm corresponds to a structure found in the data, we used the stability measures to pick the number of clusters. The combined stability index gave best results     

CONSENSUS-BASED ENSEMBLES OF SOFT CLUSTERINGS

The problem of obtaining a single “consensus” clustering solution from a multitude or ensemble of clusterings of a set of objects, has attracted much interest recently because of its numerous practical applications. While a wide variety of approaches including graph partitioning, maximum likelihood, genetic algorithms, and voting-merging have been proposed so far to solve this problem, virtually all of them work on hard partitionings, i.e., where an object is a member of exactly one cluster in any individual solution. However, many clustering algorithms such as fuzzy c-means naturally output soft partitionings of data, and forcibly hardening these partitions before applying a consensus method potentially involves loss of valuable information. In this article we propose several consensus algorithms that can be applied directly to soft clusterings. Experimental results over a variety of real-life datasets are also provided to show that using soft clusterings as input does offer significant advantages, especially when dealing with vertically partitioned data.     

基于MapReduce的FCM聚类集成算法

针对传统的聚类集成算法难以高效地处理海量数据的聚类分析问题,提出一种基于MapReduce的并行FCM聚类集成算法。算法利用随机初始聚心来获取具有差异化的聚类成员,通过建立聚类成员簇间OVERLAP矩阵来寻找逻辑等价簇,最后利用投票法共享聚类成员中数据对象的分类情况得出最终的聚类结果。实验证明,该算法具有良好的精确度,加速比和扩展性,具有处理较大规模数据集的能力。     

一种深度自监督聚类集成算法

针对聚类集成中一致性函数设计问题,本文提出一种深度自监督聚类集成算法。该算法首先根据基聚类划分结果采用加权连通三元组算法计算样本之间的相似度矩阵,基于相似度矩阵表达邻接关系,将基聚类由特征空间中的数据表示变换至图数据表示;在此基础上,基聚类的一致性集成问题被转化为对基聚类图数据表示的图聚类问题。为此,本文利用图神经网络构造自监督聚类集成模型,一方面采用图自动编码器学习图的低维嵌入,依据低维嵌入似然分布估计聚类集成的目标分布;另一方面利用聚类集成目标对低维嵌入过程进行指导,确保模型获得的图低维嵌入与聚类集成结果是一致最优的。在大量数据集上进行了仿真实验,结果表明本文算法相比HGPA、CSPA和MCLA等算法可以进一步提高聚类集成结果的准确性。     

Effects of resampling method and adaptation on clustering ensemble efficacy

Clustering ensembles combine multiple partitions of data into a single clustering solution of better quality. Inspired by the success of supervised bagging and boosting algorithms, we propose non-adaptive and adaptive resampling schemes for the integration of multiple independent and dependent clusterings. We investigate the effectiveness of bagging techniques, comparing the efficacy of sampling with and without replacement, in conjunction with several consensus algorithms. In our adaptive approach, individual partitions in the ensemble are sequentially generated by clustering specially selected subsamples of the given dataset. The sampling probability for each data point dynamically depends on the consistency of its previous assignments in the ensemble. New subsamples are then drawn to increasingly focus on the problematic regions of the input feature space. A measure of data point clustering consistency is therefore defined to guide this adaptation. Experimental results show improved stability and accuracy for clustering structures obtained via bootstrapping, subsampling, and adaptive techniques. A meaningful consensus partition for an entire set of data points emerges from multiple clusterings of bootstraps and subsamples. Subsamples of small size can reduce computational cost and measurement complexity for many unsupervised data mining tasks with distributed sources of data. This empirical study also compares the performance of adaptive and non-adaptive clustering ensembles using different consensus functions on a number of datasets. By focusing attention on the data points with the least consistent clustering assignments, whether one can better approximate the inter-cluster boundaries or can at least create diversity in boundaries and this results in improving clustering accuracy and convergence speed as a function of the number of partitions in the ensemble. The comparison of adaptive and non-adaptive approaches is a new avenue for research, and this study helps to pave the way for the useful application of distributed data mining methods.     

Self-Organizing-Map Based Clustering Using a Local Clustering Validity Index

Classical clustering methods, such as partitioning and hierarchical clustering algorithms, often fail to deliver satisfactory results, given clusters of arbitrary shapes. Motivated by a clustering validity index based on inter-cluster and intra-cluster density, we propose that the clustering validity index be used not only globally to find optimal partitions of input data, but also locally to determine which two neighboring clusters are to be merged in a hierarchical clustering of Self-Organizing Map (SOM). A new two-level SOM-based clustering algorithm using the clustering validity index is also proposed. Experimental results on synthetic and real data sets demonstrate that the proposed clustering algorithm is able to cluster data in a better way than classical clustering algorithms on an SOM.     

A scalable framework for cluster ensembles

An ensemble of clustering solutions or partitions may be generated for a number of reasons. If the data set is very large, clustering may be done on tractable size disjoint subsets. The data may be distributed at different sites for which a distributed clustering solution with a final merging of partitions is a natural fit. In this paper, two new approaches to combining partitions, represented by sets of cluster centers, are introduced. The advantage of these approaches is that they provide a final partition of data that is comparable to the best existing approaches, yet scale to extremely large data sets. They can be 100,000 times faster while using much less memory. The new algorithms are compared against the best existing cluster ensemble merging approaches, clustering all the data at once and a clustering algorithm designed for very large data sets. The comparison is done for fuzzy and hard-k-means based clustering algorithms. It is shown that the centroid-based ensemble merging algorithms presented here generate partitions of quality comparable to the best label vector approach or clustering all the data at once, while providing very large speedups.     

基于数学形态学的聚类集成算法

提出了基于数学形态学的聚类集成算法CEOMM.它利用不同的结构元素的探针作用,对不同的结构元素探测出来的簇核心图进行集成,在集成所得到的簇核心基础上聚类.实验结果表明,算法CEOMM对有复杂类形状的数据集进行聚类时,效果比传统聚类算法更好,且能确定聚类数.而且由于采用了不同的结构元素进行探测,对于由不同形状的类构成的数据集其聚类效果很理想.     

Combining multiple clusterings using evidence accumulation

We explore the idea of evidence accumulation (EAC) for combining the results of multiple clusterings. First, a clustering ensemble - a set of object partitions, is produced. Given a data set (n objects or patterns in d dimensions), different ways of producing data partitions are: 1) applying different clustering algorithms and 2) applying the same clustering algorithm with different values of parameters or initializations. Further, combinations of different data representations (feature spaces) and clustering algorithms can also provide a multitude of significantly different data partitionings. We propose a simple framework for extracting a consistent clustering, given the various partitions in a clustering ensemble. According to the EAC concept, each partition is viewed as an independent evidence of data organization, individual data partitions being combined, based on a voting mechanism, to generate a new n /spl times/ n similarity matrix between the n patterns. The final data partition of the n patterns is obtained by applying a hierarchical agglomerative clustering algorithm on this matrix. We have developed a theoretical framework for the analysis of the proposed clustering combination strategy and its evaluation, based on the concept of mutual information between data partitions. Stability of the results is evaluated using bootstrapping techniques. A detailed discussion of an evidence accumulation-based clustering algorithm, using a split and merge strategy based on the k-means clustering algorithm, is presented. Experimental results of the proposed method on several synthetic and real data sets are compared with other combination strategies, and with individual clustering results produced by well-known clustering algorithms.     

A review: accuracy optimization in clustering ensembles using genetic algorithms

The clustering ensemble has emerged as a prominent method for improving robustness, stability, and accuracy of unsupervised classification solutions. It combines multiple partitions generated by different clustering algorithms into a single clustering solution. Genetic algorithms are known as methods with high ability to solve optimization problems including clustering. To date, significant progress has been contributed to find consensus clustering that will yield better results than existing clustering. This paper presents a survey of genetic algorithms designed for clustering ensembles. It begins with the introduction of clustering ensembles and clustering ensemble algorithms. Subsequently, this paper describes a number of suggested genetic-guided clustering ensemble algorithms, in particular the genotypes, fitness functions, and genetic operations. Next, clustering accuracies among the genetic-guided clustering ensemble algorithms is compared. This paper concludes that using genetic algorithms in clustering ensemble improves the clustering accuracy and addresses open questions subject to future research.     

Weighted association based methods for the combination of heterogeneous partitions

Co-association matrix has been a useful tool in many clustering ensemble techniques as a similarity measure between objects. In this paper, we introduce the weighted-association matrix, which is more expressive than the traditional co-association as a similarity measure, in the sense that it integrates information from the set of partitions in the clustering ensemble as well as from the original data of object representations. The weighted-association matrix is the core of the two main contributions of this paper: a natural extension of the well-known evidence accumulation cluster ensemble method by using the weighted-association matrix and a kernel based clustering ensemble method that uses a new data representation. These methods are compared with simple clustering algorithms as well as with other clustering ensemble algorithms on several datasets. The obtained results ratify the accuracy of the proposed algorithms.     

解决文本聚类集成问题的两个谱算法

聚类集成中的关键问题是如何根据不同的聚类器组合为最终的更好的聚类结果. 本文引入谱聚类思想解决文本聚类集成问题, 然而谱聚类算法需要计算大规模矩阵的特征值分解问题来获得文本的低维嵌入, 并用于后续聚类. 本文首先提出了一个集成算法, 该算法使用代数变换将大规模矩阵的特征值分解问题转化为等价的奇异值分解问题, 并继续转化为规模更小的特征值分解问题; 然后进一步研究了谱聚类算法的特性, 提出了另一个集成算法, 该算法通过求解超边的低维嵌入, 间接得到文本的低维嵌入. 在TREC和Reuters文本数据集上的实验结果表明, 本文提出的两个谱聚类算法比其他基于图划分的集成算法鲁棒, 是解决文本聚类集成问题行之有效的方法.     

A novel member enhancement-based clustering ensemble algorithm

Clustering ensemble is a popular approach for identifying data clusters that combines the clustering results from multiple base clustering algorithms to produce more accurate and robust data clusters. However, the performance of clustering ensemble algorithms is highly dependent on the quality of clustering members. To address this problem, this paper proposes a member enhancement-based clustering ensemble (MECE) algorithm that selects the ensemble members by considering their distribution consistency. MECE has two main components, called heterocluster splitting and homocluster merging. The first component estimates two probability density functions (p.d.f.s) estimated on the sample points of an heterocluster and represents them using a Gaussian distribution and a Gaussian mixture model. If the random numbers generated by these two p.d.f.s have different probability distributions, the heterocluster is then split into smaller clusters. The second component merges the clusters that have high neighborhood densities into a homocluster, where the neighborhood density is measured using a novel evaluation criterion. In addition, a co-association matrix is presented, which serves as a summary for the ensemble of diverse clusters. A series of experiments were conducted to evaluate the feasibility and effectiveness of the proposed ensemble member generation algorithm. Results show that the proposed MECE algorithm can select high quality ensemble members and as a result yield the better clusterings than six state-of-the-art ensemble clustering algorithms, that is, cluster-based similarity partitioning algorithm (CSPA), meta-clustering algorithm (MCLA), hybrid bipartite graph formulation (HBGF), evidence accumulation clustering (EAC), locally weighted evidence accumulation (LWEA), and locally weighted graph partition (LWGP). Specifically, MECE algorithm has the nearly 23% higher average NMI, 27% higher average ARI, 15% higher average FMI, and 10% higher average purity than CSPA, MCLA, HBGF, EAC, LWEA, and LWGA algorithms. The experimental results demonstrate that MECE algorithm is a valid approach to deal with the clustering ensemble problems.