Correlation between soil apparent electroconductivity and plant hyperspectral reflectance in a managed wetland

The apparent electrical conductivity (σ_a) of soil is influenced by a complex combination of soil physical and chemical properties. For this reason, σ_a is proposed as an indicator of plant stress and potential community structure changes in an alkaline wetland setting. However, assessing soil σ_a is relatively laborious and difficult to accomplish over large wetland areas. This work examines the feasibility of using the hyperspectral reflectance of the vegetation canopy to characterize the σ_a of the underlying substrate in a study conducted in a Central California managed wetland. σ_a determined by electromagnetic (EM) inductance was tested for correlation with in-situ hyperspectral reflectance measurements, focusing on a key waterfowl forage species, swamp timothy (Crypsis schoenoides). Three typical hyperspectral indices, individual narrow-band reflectance, first-derivative reflectance and a narrow-band normalized difference spectral index (NDSI), were developed and related to soil σ_a using univariate regression models. The coefficient of determination (R ²) was used to determine optimal models for predicting σ_a, with the highest value of R ² at 2206 nm for the individual narrow bands (R ²?=?0.56), 462 nm for the first-derivative reflectance (R ²?=?0.59), and 1549 and 2205 nm for the narrow-band NDSI (R ²?=?0.57). The root mean squared error (RMSE) and relative root mean squared error (RRMSE) were computed using leave-one-out cross-validation (LOOCV) for accuracy assessment. The results demonstrate that the three indices tested are valid for estimating σ_a, with the first-derivative reflectance performing better (RMSE?=?30.3 mS m^?1, RRMSE?=?16.1%) than the individual narrow-band reflectance (RMSE?=?32.3 mS m^?1, RRMSE?=?17.1%) and the narrow-band NDSI (RMSE?=?31.5 mS m^?1, RRMSE?=?16.7%). The results presented in this paper demonstrate the feasibility of linking plant–soil σ_a interactions using hyperspectral indices based on in-situ spectral measurements.     

Detection of stressed oil palms from an airborne sensor using optimized spectral indices

Existing vegetation indices and red-edge techniques have been widely used for the assessment of vegetation status and vegetation health from remote-sensing instruments. This study proposed and applied optimized Airborne Imaging Spectrometer for Applications (AISA) airborne hyperspectral indices in assessing and mapping stressed oil palm trees. Six vegetation indices, four red-edge techniques, a standard supervised classifier and three optimized AISA spectral indices were compared in mapping diseased oil palms using AISA airborne hyperspectral imagery. The optimized AISA spectral indices algorithms used newly defined reflectance values at wavelength locations of 734 nm (near-infrared (NIR)) and 616 nm (red). The selection of these two bands was based on laboratory statistical analysis using field spectroradiometer reflectance data. These two bands were then applied to the AISA airborne hyperspectral imagery using the three optimized algorithms for AISA data. The newly formulated AISA hyperspectral indices were D2 = R ₆₁₆/R ₇₃₄, normalized difference vegetation index a (NDVIa)?=?(R ₇₃₄ – R ₆₁₆)/(R ₇₃₄?+?R ₆₁₆) and transformed vegetation index a (TVIa)?=?((NDVIa?+?0.5)/(abs (NDVIa?+?0.5))?×?[abs (NDVIa?+?0.5)]^1/2. The classification results from the optimized AISA hyperspectral indices were compared with the other techniques and the optimized AISA spectral indices obtained the highest overall accuracy. D2 and NDVIa obtained 86% of overall accuracy followed by TVIa with 84% of overall accuracy.     

Estimating leaf nitrogen concentration in heterogeneous crop plants from hyperspectral reflectance

The estimation of leaf nitrogen concentration (LNC) in crop plants is an effective way to optimize nitrogen fertilizer management and to improve crop yield. The objectives of this study were to (1) analyse the spectral features, (2) explore the spectral indices, and (3) investigate a suitable modelling strategy for estimating the LNC of five species of crop plants (rice (Oryza sativa L.), corn (Zea mays L.), tea (Camellia sinensis), gingili (Sesamum indicum), and soybean (Glycine max)) with laboratory-based visible and near-infrared reflectance spectra (300–2500 nm). A total of 61 leaf samples were collected from five species of crop plant, and their LNC and reflectance spectra were measured in laboratories. The reflectance spectra of plants were reduced to 400–2400 and smoothed using the Savitzky–Golay (SG) smoothing method. The normalized band depth (NBD) values of all bands were calculated from SG-smoothed reflectance spectra, and a successive projections algorithm-based multiple linear regression (SPA-MLR) method was then employed to select the spectral features for five species. The SG-smoothed reflectance spectra were resampled using a spacing interval of 10 nm, and normalized difference spectral index (NDSI) and three-band spectral index (TBSI) were calculated for all wavelength combinations between 400 and 2400 nm. The NDSI and TBSI values were employed to calibrate univariate regression models for each crop species. The leave-one-out cross-validation procedure was used to validate the calibrated regression models. Study results showed that the spectral features for LNC estimation varied among different crop species. TBSI performed better than NDSI in estimating LNC in crop plants. The study results indicated that there was no common optimal TBSI and NDSI for different crop species. Therefore, we suggest that, when monitoring LNC in heterogeneous crop plants with hyperspectral reflectance, it might be appropriate to first classify the data set considering different crop species and then calibrate the model for each species. The method proposed in this study requires further testing with the canopy reflectance and hyperspectral images of heterogeneous crop plants.     

Estimating the leaf area index in Indian tropical forests using Landsat-8 OLI data

Leaf area index (LAI) is a key vegetation biophysical parameter and is extensively used in modelling of phenology, primary production, light interception, evapotranspiration, carbon, and nitrogen dynamics. In the present study, we attempt to spatially characterize LAI for natural forests of Western Ghats India, using ground based and Landsat-8 Operational Land Imager (OLI) sensor satellite data. For this, 41 ground-based LAI measurements were carried out across a gradient of tropical forest types, viz. dry, moist, and evergreen forests using LAI-2200 plant canopy analyser, during the month of March 2015. Initially, measured LAI values were regressed with 15 spectral variables, including nine spectral vegetation indices (SVIs) and six Landsat-8 surface reflectance (ρ) variables using univariate correlation analysis. Results showed that the red (ρ_red), near-infrared (ρ_NIR), shortwave infrared (ρ_SWIR1, ρ_SWIR2) reflectance bands (R² > 0.6), and all SVIs (R² > 0.7) except simple ratio (SR) have the highest and second highest coefficient of determination with ground-measured LAI. In the second step, to select significant (high R², low root mean square error (RMSE), and p-level < 0.05) SVIs to determine the best representative model, stepwise multiple linear regression (SMLR) was implemented. The results indicate that the SMLR model predicted LAI with better coefficient of determination (R² = 0.83, RMSE = 0.78) using normalized difference vegetation index, enhanced vegetation index, and soil-adjusted vegetation index variables compared to the univariate approach. The predicted SMLR model was used to estimate a spatial map of LAI. It is desirable to evaluate the stability and potentiality of regional LAI models in natural forest ecosystems against the operationally accepted Moderate Resolution Imaging Spectroradiometer (MODIS) global LAI product. To do this, the Landsat-8 pixel-based LAI map was resampled to 1 km resolution and compared with the MODIS derived LAI map. Results suggested that Landsat-8 OLI-based VIs provide significant LAI maps at moderate resolution (30 m) as well as coarse resolution (1 km) for regional climate models.     

An evaluation of EO-1 hyperspectral Hyperion data for chlorophyll content and leaf area index estimation

Estimation of chlorophyll content and the leaf area index (LAI) using remote sensing technology is of particular use in precision agriculture. Wavelengths at the red edge of the vegetation spectrum (705 and 750 nm) were selected to test vegetation indices (VIs) using spaceborne hyperspectral Hyperion data for the estimation of chlorophyll content and LAI in different canopy structures. Thirty sites were selected for the ground data collection. The results show that chlorophyll content and LAI can be successfully estimated by VIs derived from Hyperion data with a root mean square error (RMSE) of 7.20–10.49 μg cm^?2 for chlorophyll content and 0.55–0.77 m² m^?2 for LAI. The special index derived from three bands provided the best estimation of the chlorophyll content (RMSE of 7.19 μg cm^?2 for the Modified Chlorophyll Absorption Ratio Index/Optimized Soil-Adjusted Vegetation Index (MCARI/OSAVI₇₀₅)) and LAI (RMSE of 0.55 m² m^?2 for a second form of the MCARI (MCARI2₇₀₅)). These results demonstrate the possibilities for analysing the variation in chlorophyll content and LAI using hyperspectral Hyperion data with bands from the red edge of the vegetation spectrum.     

Assessing corn water stress using spectral reflectance

Multiple remote-sensing techniques have been developed to identify crop-water stress; however, some methods may be difficult for farmers to apply. If spectral reflectance data can be used to monitor crop-water stress, growers could use this information as a quick low-cost guideline for irrigation management, thus helping save water by preventing over-irrigating and achieving desired crop yields. Data was collected in the 2013 growing season near Greeley, Colorado, where drip irrigation was used to irrigate 12 corn (Zea mays L.) treatments with varying water-deficit levels. Ground-based multispectral data were collected and three different vegetation indices were evaluated. These included the normalized difference vegetation index (NDVI), the optimized soil-adjusted vegetation index (OSAVI), and the Green normalized difference vegetation index (GNDVI). The three vegetation indices were compared to water stress as indicated by the stress coefficient (K_s), and water deficit in the root zone was calculated using a soil water balance. To compare the indices to K_s, vegetation ratios were developed from vegetation indices in the process of normalization. Vegetation ratios are defined as the non-stressed vegetation index divided by the stressed vegetation index. Results showed that vegetation ratios were sensitive to water stress as indicated by the good coefficient of determination (R² > 0.46) values and low root mean square error (RMSE < 0.076) values when compared to K_s. To use spectral reflectance to manage crop-water stress, an example irrigation trigger point of 0.93 for the vegetation ratios was determined for a 10–12% loss in yield. These results were validated using data collected from a different field. The performance of the vegetation ratio approach was better than when applied to the main field giving higher goodness of fit values (R² > 0.63), and lower error values (RMSE < 0.043) between K_s and the vegetation indices.     

Non-photosynthetic vegetation biomass estimation in semiarid Canadian mixed grasslands using ground hyperspectral data,Landsat 8 OLI,and Sentinel-2 images

ABSTRACT

Research on quantifying non-photosynthetic vegetation (NPV) with optical remote-sensing approaches has been focusing on optically distinguishing NPV from green vegetation and bare soil. With a very similar spectral response curve to NPV, dry moss is a significant component in semiarid mixed grasslands and plays a large role in NPV estimation. However, limited attention has been paid to this role. We investigated the potential of optical remote sensing to distinguish NPV biomass in semiarid grasslands characterized by NPV, biological soil crust dominated by moss and lichen, and bare soil. First, hyperspectral spectral indices were examined to determine the most useful spectral wavelength regions for NPV biomass estimation. Second, multispectral red-edge indices and shortwave infrared (SWIR) indices were simulated based on Landsat 8 Operational Land Imager (OLI) and Sentinel-2A MultiSpectral Instrument band reflectance, respectively, to determine the most suitable multispectral indices for NPV estimation. The potential multispectral indices were then applied to Landsat 8 OLI images and Sentinel-2A images acquired in early, middle, peak, and early senescence growing seasons to investigate the potential of satellite images for quantifying NPV biomass. Our results indicated that hyperspectral red-edge indices, modified simple ratio, modified red-edge normalized difference vegetation index (mNDVI₇₀₅), and normalized difference vegetation index (NDVI₇₀₅) are better than the SWIR hyperspectral indices, including cellulose absorption index for quantifying NPV biomass. The simulated multispectral red-edge spectral indices (NDVI_red-edge and mNDVI_red-edge) demonstrate good and comparable performance on quantifying NPV biomass with SWIR multispectral indices (normalized difference index [NDI5 and NDI7] and soil-adjusted corn residue index). Nevertheless, the multispectral indices derived from Landsat 8 OLI and Sentinel-2 images have limited potential for NPV biomass estimation.     

Evaluation of hyperspectral indices for LAI estimation and discrimination of potato crop under different irrigation treatments

In this study, various hyperspectral indices were evaluated for estimation of leaf area index (LAI) and crop discrimination under different irrigation treatments. The study was conducted for potato crop using the spectral reflectance values measured by a hand‐held spectro‐radiometer. Three categories of hyperspectral indices, such as ratio/difference indices, multivariate indices and derivative based indices were computed. It was found that, among various band combinations for NDVI (normalized difference vegetation index) and SAVI (soil adjusted vegetation index), the band combination of the 780～680, produced highest correlation coefficient with LAI. Among all the forms of LAI and VI empirical relationships, the power and exponential equations had highest R ² and F values. Analysis of variance showed that, hyperspectral indices were found to be more efficient than the LAI to detect the differences among crops under different irrigation treatments. The discriminant analysis produced a set of five most optimum bands to discriminate the crops under three irrigation treatments.     

The assessment of leaf water content using leaf reflectance ratios in the visible,near‐, and short‐wave‐infrared

The common features of spectral reflectance from vegetation foliage upon leaf dehydration are decreasing water absorption troughs in the near‐infrared (NIR) and short‐wave‐infrared (SWIR). We studied which leaf water index in the NIR and SWIR is most suitable for the assessment of leaf water content and the detection of leaf dehydration from the laboratory standpoint. We also examined the influence of the thickness of leaves upon leaf water indices. All leaf water content indices examined exhibited basic correlations with the relative water content (RWC) of leaves, while the R ₁₃₀₀/R ₁₄₅₀ leaf water index also demonstrated a high signal strength and low variability (R ²>0.94). All examined leaf reflectance ratios could also be correlated with leaf thickness. The thickness of leaves, however, was not independent of leaf RWC but appeared to decrease substantially as a result of leaf dehydration.     

Effects of adaxial and abaxial surface on the estimation of leaf chlorophyll content using hyperspectral vegetation indices

Vegetation indices are frequently used for the non-destructive assessment of leaf chemistry, especially chlorophyll content. However, most vegetation indices were developed based on the statistical relationship between the spectral reflectance of the adaxial leaf surface and chlorophyll content, even though abaxial leaf surfaces may influence reflectance spectra because of canopy structure or the inclination of leaves. In the present study, reflectance spectra from both adaxial and abaxial leaf surfaces of Populus alba and Ulmus pumila var. pendula were measured. The results showed that structural differences of the two leaf surfaces may result in differences in reflectance and hyperspectral vegetation indices. Among 30 vegetation indices tested, R₆₇₂/(R₅₅₀ × R₇₀₈) had the smallest difference (4.66% for P. alba, 2.30% for U. pumila var. pendula) between the two blade surfaces of the same leaf in both species. However, linear regression analysis showed that several vegetation indices (R₈₅₀ ? R₇₁₀)/(R₈₅₀ ? R₆₈₀), VOG₂, D₇₃₀, and D₇₄₀, had high coefficients of determination (R² > 0.8) and varied little between the two leaf surfaces of the plants we sampled. This demonstrated that these four vegetation indices had relatively stable accuracy for estimating leaf chlorophyll content. The coefficients of determination (R²) for the calibration of P. alba leaves were 0.92, 0.98, 0.93, and 0.95 on the adaxial surfaces, and 0.88, 0.87, 0.88, and 0.92 on the abaxial surfaces. The coefficients of determination (R²) for the calibration of U. pumila var. pendula leaves were 0.85, 0.91, 0.86, and 0.90 on adaxial surface, and 0.80, 0.80, 0.84, and 0.88 on abaxial surface. These four vegetation indices were readily available and were little influenced by the differences in the two leaf surfaces during the estimation of leaf chlorophyll content.     

Leaf area and clumping indices for a boreal mixed-wood forest: lidar,hyperspectral, and Landsat models

The leaf area index (LAI) and the clumping index (CI) provide valuable insight into the spatial patterns of forest canopies, the canopy light regime and forest productivity. This study examines the spatial patterns of LAI and CI in a boreal mixed-wood forest, using extensive field measurements and remote sensing analysis. The objectives of this study are to: (1) examine the utility of airborne lidar (light detection and ranging) and hyperspectral data to model LAI and clumping indices; (2) compare these results to those found from commonly used Landsat vegetation indices (i.e. the normalized difference vegetation index (NDVI) and the simple ratio (SR)); (3) determine whether the fusion of lidar data with Landsat and/or hyperspectral data will improve the ability to model clumping and LAI; and (4) assess the relationships between clumping, LAI and canopy biochemistry.

Regression models to predict CI were much stronger than those for LAI at the site. Lidar was the single best predictor of CI (r ² > 0.8). Landsat NDVI and SR also had a moderately strong predictive performance for CI (r ² > 0.68 with simple linear and non-linear regression forms), suggesting that canopy clumping can be predicted operationally from satellite platforms, at least in boreal mixed-wood environments. Foliar biochemistry, specifically canopy chlorophyll, carotenoids, magnesium, phosphorus and nitrogen, was strongly related to the clumping index. Combined, these results suggest that Landsat models of clumping could provide insight into the spatial distribution of foliar biochemistry, and thereby photosynthetic capacity, for boreal mixed-wood canopies. LAI models were weak (r ² < 0.4) unless separate models were used for deciduous and coniferous plots. Coniferous LAI was easier to model than deciduous LAI (r ² > 0.8 for several indices). Deciduous models of LAI were weaker for all remote sensing indices (r ² < 0.67). There was a strong, linear relationship between foliar biochemistry and LAI for the deciduous plots. Overall, our results suggest that broadband satellite indices have strong predictive performance for clumping, but that airborne hyperspectral or lidar data are required to develop strong models of LAI at this boreal mixed-wood site.     

New spectral indicator assessing the efficiency of crop nitrogen treatment in corn and wheat

To reduce environment pollution from cropping activities, a reliable indicator of crop N status is needed for site-specific N management in agricultural fields. Nitrogen Nutrition Index (NNI) can be a valuable candidate, but its measurement relies on tedious sampling and laboratory analysis. This study proposes a new spectral index to estimate plant nitrogen (N) concentration, which is a critical component of NNI calculation. Hyperspectral reflectance data, covering bands from 325 to 1075 nm, were collected using a ground-based spectroradiometer on corn and wheat crops at different growth stages from 2005 to 2008. Data from 2006 to 2008 was used for new index development and the comparison of the new index with some existing indices. Data from 2005 was used to validate the best index for predicting plant N concentration. Additionally, a hyperspectral image of corn field in 2005 was acquired using an airborne Compact Airborne Spectrographic Imager (CASI), and the corresponding plant N concentration was obtained by conventional laboratory methods on selected area. These data were also used for validation. A new N index, named Double-peak Canopy Nitrogen Index (DCNI), was developed and compared to the existing indices that were used for N detection. In this study, DCNI was the best spectral index for predicting plant N concentration, with R² values of 0.72 for corn, 0.44 for wheat, and 0.64 for both species combined, respectively. The validation using an independent ground-based spectral database of corn acquired in 2005, yielded an R² value of 0.62 and a root-mean-square-error (RMSE) of 2.7 mg N g^− 1 d.m. The validation using the CASI spectral information, DCNI calculation was related to actual corn N concentration with a R² value of 0.51 and a RMSE value of 3.1 mg N g^− 1 d.m. It is concluded that DCNI, in association with indices related to biomass, has a good potential for remote assessment of NNI.     

Effect of leaf and spike morphological traits on the relationship between spectral reflectance indices and yield in wheat

While certain spectral reflectance indices have been shown to be sensitive to the expression of a range of performance-related traits in crops, knowledge of the potentially confounding effects associated with plant anatomy could help improve their application in phenotyping. Morphological traits (leaf and spike wax content, leaf and spike orientation, and awns on spikes) were studied in 20 contrasting advanced wheat lines to determine their influence on spectral indices and in their association with grain yield under well-irrigated conditions. Canopy reflectance (400–1100 nm) was determined at heading and grain filling during two growing seasons and three vegetation indices (VIs; red normalized difference vegetation index (RNDVI), green normalized difference vegetation index (GNDVI), and simple ratio (SR)), and five water indices (WIs; one simple WI and four normalized WIs (NWI-1, NWI-2, NWI-3, and NWI-4)) were calculated. The major reflectance fluctuations caused by the differences in leaf and spike morphology mainly occurred in the infrared region (700–1100 nm) and little variation in the visible region (400–700 nm). The NWI-3 ((R₉₇₀ – R₈₈₀)/(R₉₇₀ + R₈₈₀)) consistently showed a stronger association with yield than the RNDVI by using uncorrected canopy reflectance (original raw data) and data adjusted by scattering and smoothing. When canopy reflectance was corrected by a scattering method, the NWI-3 and a modified RNDVI with 958 nm showed the strongest correlations with grain yield by grouping lines for waxy leaves and spikes, curved leaves, and erect and awnless spikes. The results showed that the relationship between the spectral indices and grain yield can be improved (higher correlations) by correcting canopy reflectance for confounding effects associated with differences in leaf and spike morphology.     

MODIS‐derived visible atmospherically resistant index for monitoring chaparral moisture content

Time series of normalized difference indices (NDIs) derived from MODIS surface reflectance data provide potentially useful information for monitoring fuel moisture content (FMC) for fire risk assessment. The visible atmospherically resistant index (VARI) and normalized difference water index (NDWI) were compared for monitoring live FMC of chaparral shrublands. Regression coefficients are encouraging given disparate spatial resolutions of ground‐based FMC measurements and MODIS‐derived NDIs. VARI exhibited greater temporal co‐variability (0.79>r ²<0.94) and spatial robustness with FMC than NDWI, even though the former is based solely on visible waveband reflectance data.     

Using wavelet analysis of hyperspectral remote-sensing data to estimate canopy chlorophyll content of winter wheat under stripe rust stress

Chlorophyll content can be used as an indicator to monitor crop diseases. In this article, an experiment on winter wheat stressed by stripe rust was carried out. The canopy reflectance spectra were collected when visible symptoms of stripe rust in wheat leaves were seen, and canopy chlorophyll content was measured simultaneously in laboratory. Continuous wavelet transform (CWT) was applied to process the smoothed spectral and derivative spectral data of winter wheat, and the wavelet coefficient features obtained by CWT were regarded as the independent variable to establish estimation models of chlorophyll content. The hyperspectral vegetation indices were also regarded as the independent variable to build estimation models. Then, two types of models above-mentioned were compared to ascertain which type of model is better. The cross-validation method was used to determine the model accuracies. The results indicated that the estimation model of chlorophyll content, which is a multivariate linear model constructed using wavelet coefficient features extracted by Mexican Hat wavelet function processing the smoothed spectrum (WSMH1 and WSMH2), is the best model. It has the highest estimation accuracy with modelled coefficient of determination (R²) of 0.905, validated R² of 0.913, and root mean square error (RMSE) of 0.288 mg fg^?1. The univariate linear model built by wavelet coefficient feature of WSMH1 is secondary and the modelled R² is 0.797, validated R² is 0.795, and RMSE is 0.397 mg fg^?1. Both estimation models are better than those of all hyperspectral vegetation indices. The research shows that the feature information of canopy chlorophyll content of winter wheat can be captured by wavelet coefficient features which are extracted by the method of CWT processing canopy reflectance spectrum data. Therefore, it could provide theoretical support on detecting diseases of crop by remote sensing quantitatively estimating chlorophyll content.     

Spatio-temporal remote sensing of vertical and seasonal chlorophyll-a:b ratio in Tamarix ramosissima

Remotely sensed spectral reflectance data have provided avenues for large-scale non-destructive estimation of temporal and spatial variations of physiological processes in plants. This study established the potential for tracking (chlorophyll) chl-a:b ratio in Tamarix ramosissima based on -leaf-scale photochemical reflectance index (PRI) at Fukang Station of Desert Ecology in the hinterland of the Junggar Basin, Xinjiang, northwest China. Leaves were sampled on a monthly basis over a 3-year growing period. T. ramosissima tolerance to the fragile arid conditions revealed higher coefficient of determination (R² > 0.6) between chl-a:b ratio and N content at each light condition. This implied a higher potential for irradiance acclimation through plasticity in photosynthetic apparatus, and hence an important attribute for colonizing wider desert ecological range. PRI was negatively correlated to chl-a:b ratio regardless of season but was more sensitive to changes in light condition. The modified PRI (PRI_mod, R₅₁₀–R₅₇₀ nm) performed better than the original PRI (PRI, R₅₃₁–R₅₇₀ nm) with R² improvement in all data sets of this species. These results implied that seasonality and leaf age, within canopy resource variation and the individual species must be considered when applying PRI_mod to estimate chl-a:b ratio. Application of empirical indices avails a non-destructive timely leaf-level, species and site-specific avenue of detecting vegetation status in arid ecosystems. Remote estimation of chl-a:b ratio obtained at leaf scale in this study could be scaled to ecosystem and global scale by effective estimation of spatial distribution and seasonal variation using other pigment-related vegetation index such as the normalized difference vegetation index, or combination of PRI and the water band index.     

Leaf chlorophyll content retrieval from airborne hyperspectral remote sensing imagery

Hyperspectral remote sensing has great potential for accurate retrieval of forest biochemical parameters. In this paper, a hyperspectral remote sensing algorithm is developed to retrieve total leaf chlorophyll content for both open spruce and closed forests, and tested for open forest canopies. Ten black spruce (Picea mariana (Mill.)) stands near Sudbury, Ontario, Canada, were selected as study sites, where extensive field and laboratory measurements were carried out to collect forest structural parameters, needle and forest background optical properties, and needle biophysical parameters and biochemical contents chlorophyll a and b. Airborne hyperspectral remote sensing imagery was acquired, within one week of ground measurements, by the Compact Airborne Spectrographic Imager (CASI) in a hyperspectral mode, with 72 bands and half bandwidth 4.25-4.36 nm in the visible and near-infrared region and a 2 m spatial resolution. The geometrical-optical model 4-Scale and the modified leaf optical model PROSPECT were combined to estimate leaf chlorophyll content from the CASI imagery. Forest canopy reflectance was first estimated with the measured leaf reflectance and transmittance spectra, forest background reflectance, CASI acquisition parameters, and a set of stand parameters as inputs to 4-Scale. The estimated canopy reflectance agrees well with the CASI measured reflectance in the chlorophyll absorption sensitive regions, with discrepancies of 0.06%-1.07% and 0.36%-1.63%, respectively, in the average reflectances of the red and red-edge region. A look-up-table approach was developed to provide the probabilities of viewing the sunlit foliage and background, and to determine a spectral multiple scattering factor as functions of leaf area index, view zenith angle, and solar zenith angle. With the look-up tables, the 4-Scale model was inverted to estimate leaf reflectance spectra from hyperspectral remote sensing imagery. Good agreements were obtained between the inverted and measured leaf reflectance spectra across the visible and near-infrared region, with R² = 0.89 to R² = 0.97 and discrepancies of 0.02%-3.63% and 0.24%-7.88% in the average red and red-edge reflectances, respectively. Leaf chlorophyll content was estimated from the retrieved leaf reflectance spectra using the modified PROSPECT inversion model, with R² = 0.47, RMSE = 4.34 μg/cm², and jackknifed RMSE of 5.69 μg/cm² for needle chlorophyll content ranging from 24.9 μg/cm² to 37.6 μg/cm². The estimates were also assessed at leaf and canopy scales using chlorophyll spectral indices TCARI/OSAVI and MTCI. An empirical relationship of simple ratio derived from the CASI imagery to the ground-measured leaf area index was developed (R² = 0.88) to map leaf area index. Canopy chlorophyll content per unit ground surface area was then estimated, based on the spatial distributions of leaf chlorophyll content per unit leaf area and the leaf area index.     

A linear model to predict with a multi‐spectral radiometer the amount of nitrogen in winter wheat

The objective was to develop an optimal vegetation index (VI_opt) to predict with a multi‐spectral radiometer nitrogen in wheat crop (kg[N] ha^?1). Optimality means that nitrogen in the crop can be measured accurately in the field during the growing season. It also means that the measurements are stable under changing light conditions and vibrations of the measurement platform. Different fields, on which various nitrogen application rates and seeding densities were applied in experimental plots, were measured optically during the growing season. These measurements were performed over three years. Optical measurements on eight dates were related to calibration measurements of nitrogen in the crop (kg[N] ha^?1) as measured in the laboratory. By making combinations of the wavelength bands, and whether or not the soil factor was taken into account, numerous vegetation indices (VIs) were examined for their accuracy in predicting nitrogen in wheat. The effect of changing light conditions in the field and vibrations of the measurement platform on the VIs were determined based on tests in the field. VI_opt ((1+L)?(R ² _NIR+1)/(R _red+L) with L = 0.45), the optimal vegetation index found, was best in predicting nitrogen in grain crop. The root mean squared error (RMSE), determined by means of cross‐validation, was 16.7 kg[N] ha^?1. The RMSE was significantly lower compared to other frequently used VIs such as NDVI, RVI, DVI, and SAVI. The L‐value can change between 0.16 and 1.6 without deteriorating the RMSE of prediction. Besides being the best predictor for nitrogen, VI_opt had the advantage of being a stable vegetation index under circumstances of changing light conditions and platform vibrations. In addition, VI_opt also had a simple structure of physically meaningful bands.     

A novel restoration approach for vegetation reflectance spectra at noisy bands using the principal component analysis method

ABSTRACT

Due to the signal-to-noise ratio (SNR) of sensors, as well as atmospheric absorption and illumination conditions, etc., hyperspectral data at some bands are of poor quality. Data restoration for noisy bands is important for many remote sensing applications. In this paper, we present a novel data-driven Principal Component Analysis (PCA) approach for restoring leaf reflectance spectra at noisy bands using the spectra at effective bands. The technique decomposes the leaf reflectance spectra into their principal components (PCs), selects the leading PCs that describe the most variance in the data, and restores the data from these components. First, the first 10 PCs were determined from a training dataset simulated by the leaf optical properties model (PROSPECT-5) that contained 99.998% of the total information in the 3636 training samples. Then, the performance of the PCA method for restoration of the reflectance at noisy bands was investigated using the ANGERS leaf optical properties dataset; the results showed the spectral root mean squared error (RMSE) is in the range 6.46 × 10^?4 to 6.44 × 10^?2, which is about 3 ? 34 times more accurate than the stepwise regression method and partial least squares method (PLSR) for the ANGERS dataset. The results also showed that if the noisy bands are far away from the effective bands, the accuracy of the restored leaf reflectance spectra will decrease. Thirdly, the reliability of the restored reflectance spectra for retrieving leaf biochemical contents was assessed using the ANGERS dataset and leaf optical properties dataset established by the Beijing Academy of Agriculture and Forestry Sciences (BAAFS). Three water-sensitive vegetation indices ? normalized difference water index (NDWI), normalized difference infrared index (NDII) and Datt water index (DWI), derived from the restored leaf spectra ? were employed to retrieve the equivalent water thickness (EWT). The results showed that the leaf water content can be accurately retrieved from the restored leaf reflectance spectra. In addition, the PCA method to restore vegetation spectral reflectance can be applied on canopy level as well. The results showed that the spectral root mean squared error (RMSE) is in the range 8.22 × 10^?4 to 1.87 × 10^?2. The performance of the restored canopy spectra was investigated according to the results of retrieving canopy equivalent water thickness (CEWT) using the five spectral indices NDWI, NDWI₁₃₇₀, NDWI₁₈₉₀, NDII and DWI. The results indicated that the restored canopy spectra can be used for retrieving CEWT reliably and improve the accuracy of retrieval compared to the results using original canopy reflectance spectra.