Structure–Activity Relationship of Inhibition of Fish Feeding by Sponge-derived and Synthetic Pyrrole–Imidazole Alkaloids

We investigated the relationship between the structures of pyrrole-containing alkaloids from marine sponges of the genus Agelas and their capacity to deter feeding by the omnivorous Caribbean reef fish, Thalassoma bifasciatum. Seven natural products were assayed at volumetric concentrations of 1, 5, and 10 mg/ml: dispacamide A, keramadine, oroidin, midpacamide, 4,5-dibromopyrrole-2-carboxylic acid, 4,5-dibromopyrrole-2carboxamide, and racemic longamide A. We also assayed 14 structural analogs obtained mostly by chemical synthesis. Of the seven natural products, only rac-longamide A was not significantly deterrent at any of the assay concentrations. The pyrrole moiety was required for feeding inhibition activity, while the addition of the imidazole group enhanced this activity. Variously functionalized imidazoles lacking the pyrrole moiety were not deterrent. Combinations of the natural products appeared to have an additive effect on feeding inhibition; there was no evidence of synergy. Given their high concentrations in sponge tissue, dispacamide A and oroidin most probably serve as the primary chemical defenses of many Agelas sp., while minor compounds such as keramadine are not present in high enough concentrations to contribute much to chemical defense.     

Synthesis and Interface Activity of a Series of Dicarboxylic Cationic Surfactants and a Structure–Efficiency Relationship Study

Quaternary ammonium cationic surfactants are widely used in many fields, but information about the effect of the anion on cationic surfactants is scarce. To study the effect of anions on the surface properties, six dicarboxylic cationic surfactants were prepared, (cetyltrimethylammonium oxalate, CTAO; cetyltrimethylammonium malonate, CTAM; cetyltrimethylammonium succinate, CTASU; cetyltrimethylammonium glutarate, CTAG; cetyltrimethylammonium adipate, CTAA; and cetyltrimethylammonium sebacate, CTASE), and their surface properties were studied, including surface tension, critical micelle concentration, foaming ability and stability, and corrosion inhibition. The results showed that the minimum surface tension followed the order of CTAO<CTAM<CTASU<CTAG<CTAA<CTASE. The foaming ability followed the order of CTAO>CTAM>CTASU>CTAG>CTAA>CTASE. The foaming stability followed the order of CTAM>CTAO>CTASU>CTAG>CTAA>CTASE. At a concentration of 1.0 g L⁻¹, the order of emulsification power of these surfactants was CTASE<CTAO<CTAA<CTAG<CTASU<CTAM, and at 5.0 g L⁻¹, the order was CTASE<CTASU<CTAA<CTAG<CTAO<CTAM. The corrosion inhibition efficiency on mild steel followed the order of CTASE<CTAA<CTAG<CTASU<CTAM<CTAO.     

Cu–Zn–Cr2O3 Catalysts for Dimethyl Ether Synthesis: Structure and Activity Relationship

The CuO dispersed on ZnCr₂O₄ catalysts derived from Cu–Zn–Cr hydrotalcite like layered double hydroxide precursors with varying Zn/Cr ratios have been synthesized, characterized by BET—Surface area, X-ray diffraction (XRD), temperature programmed reduction (TPR), electron spin resonance (ESR), N₂O titrations and the activities were evaluated for single step dimethyl ether (STD) synthesis from syngas. It is observed that the copper species were in highly dispersed state over Cu–ZnO–Cr₂O₃ at high Zn/Cr ratios while the copper cluster were present at low Zn/Cr ratios. The ESR analysis revealed signals due to isolated Cu²⁺ at high Zn/Cr ratios and clustered Cu²⁺ at low Zn/Cr ratio in fresh catalysts and only Cr³⁺ species in used catalysts. The TPR results indicated that the reduction peak shifted to high temperatures with an increase in chromium content due to large copper crystallites, which was supported by XRD analysis. The conversion of syngas to DME was well correlated with the copper metal surface areas, indicating that STD synthesis can be controlled by methanol synthesis rate.     

Biosynthesis and Structure–Activity Relationship Investigations of the Diazeniumdiolate Antifungal Agent Fragin

Only a few natural products incorporating a diazeniumdiolate moiety have been isolated, and these compounds usually display a broad range of biological activities. Only recently has the first diazeniumdiolate natural product biosynthetic gene cluster been identified in Burkholderia cenocepacia H111, which produces the fungicide (−)-fragin and the signal molecule rac-valdiazen. In this study, l -valine was identified as the initial substrate of (−)-fragin biosynthesis with the aid of feeding experiments using isotopically labelled amino acid. The formation of the diazeniumdiolate was chemically studied with several proposed intermediates. Our results indicate that the functional group is formed during an early stage of the biosynthesis. Furthermore, an oxime compound was identified as a degradation product of (−)-fragin and was also observed in the crude extract of the wild-type strain. Moreover, a structure–activity relationship analysis revealed that each moiety of (−)-fragin is essential for its biological activity.     

α-Glucosidase Inhibition Activity by Cyclic Diarylheptanoids from Alnus sieboldiana

Abstract

A diarylheptanoid, named 3,17-dihydroxy-tricyclo[12.3.1.1^2,6]nonadeca- 1(18),2,4,6(19),14,16-hexaen-9,11-dione, was newly isolated from the branch wood of Alnus sieboldiana, together with two known diarylheptanoids. The chemical structure of this compound was assigned on the basis of the NMR and MS data, information obtained though 1D- and 2D-NMR analyses. These three diarylheptanoids were found to significantly inhibit the activity of α-glucosidase.     

Structure–Activity and Structure–Toxicity Relationships of Peptoid-Based Histone Deacetylase Inhibitors with Dual-Stage Antiplasmodial Activity

Novel malaria intervention strategies are of great importance, given the development of drug resistance in malaria-endemic countries. In this regard, histone deacetylases (HDACs) have emerged as new and promising malaria drug targets. In this work, we present the design, synthesis, and biological evaluation of 20 novel HDAC inhibitors with antiplasmodial activity. Based on a previously discovered peptoid-based hit compound, we modified all regions of the peptoid scaffold by using a one-pot multicomponent pathway and submonomer routes to gain a deeper understanding of the structure–activity and structure–toxicity relationships. Most compounds displayed potent activity against asexual blood-stage P. falciparum parasites, with IC₅₀ values in the range of 0.0052–0.25 μm and promising selectivity over mammalian cells (SI^Pf3D7/HepG2: 170–1483). In addition, several compounds showed encouraging sub-micromolar activity against P. berghei exo-erythrocytic forms (PbEEF). Our study led to the discovery of the hit compound N-(2-(benzylamino)-2-oxoethyl)-N-(4-(hydroxycarbamoyl)benzyl)-4-isopropylbenzamide ( 2 h ) as a potent and parasite-specific dual-stage antiplasmodial HDAC inhibitor (IC₅₀ Pf3D7=0.0052 μm , IC₅₀ PbEEF=0.016 μm ).     

Relationship Between the Synthesis and Structure of Ceramic Precursors of the TiO2–CeO2–ZrO2 System

Refractories and Industrial Ceramics - Tetragonal solid solutions based on the TiO2–CeO2–ZrO2 system stable up to 1,350°C were obtained. A method of pH titration of the initial...     

Highly Selective and Potent Human β-Secretase 2 (BACE2) Inhibitors against Type 2 Diabetes: Design,Synthesis, X-ray Structure and Structure–Activity Relationship Studies

Herein we present the design, synthesis, and biological evaluation of potent and highly selective β-secretase 2 (memapsin 1, beta-site amyloid precursor protein cleaving enzyme 2, or BACE 2) inhibitors. BACE2 has been recognized as an exciting new target for type 2 diabetes. The X-ray structure of BACE1 bound to inhibitor 2 a {N³-[(1S,2R)-1-benzyl-2-hydroxy-3-[[(1S,2S)-2-hydroxy-1-(isobutylcarbamoyl)propyl]amino]propyl]-5-[methyl(methylsulfonyl)amino]-N¹-[(1R)-1-phenylpropyl]benzene-1,3-dicarboxamide} containing a hydroxyethylamine isostere was determined. Based on this structure, a computational docking study was performed which led to inhibitor 2 a -bound BACE2 models. These were used to optimize the potency and selectivity of inhibitors. A systematic structure–activity relationship study led to the identification of determinants of the inhibitors’ potency and selectivity toward the BACE2 enzyme. Inhibitors 2 d [N³-[(1S,2R)-1-benzyl-2-hydroxy-3-[[(1S,2S)-2-hydroxy-1-(isobutylcarbamoyl)pentyl]amino]propyl]-N¹-methyl-N¹-[(1R)-1-phenylpropyl]benzene-1,3-dicarboxamide; K_i=0.031 nm , selectivity over BACE1: ≈174 000-fold] and 3 l [N¹-((2S,3R)-3-hydroxy-1-phenyl-4-((3-(trifluoromethyl)benzyl)amino)butan-2-yl)-N³,5-dimethyl-N³-((R)-1-phenylethyl)isophthalamide; K_i=1.6 nm , selectivity over BACE1: >500-fold] displayed outstanding potency and selectivity. Inhibitor 3 l is nonpeptide in nature and may pave the way to the development of a new class of potent and selective BACE2 inhibitors with clinical potential.     

Structure and Activity of Ni- and Sb–doped SnO2 Ozone Anodes

Data are presented on the effect of the loading of Ni/Sb-SnO₂ on the physical, structural and electrochemical characteristics of this highly active ozone electrocatalyst with the aim of understanding its catalytic activity. The data strongly suggest that, despite the ‘cracked earth’ morphology of the catalysts, the walls of the fissures do not contribute to the observed electroactivity, both in terms of ferrocyanide oxidation or O₃ and O₂ evolution. In addition, the data indicate that there is a surface enrichment of Ni, and hence active sites, with increasing loading.     

Synthesis and Evaluation of Nifurtimox–Adamantane Adducts with Trypanocidal Activity

The synthesis and pharmacological evaluation of C1-substituted adamantane hydrazones, their C2-substituted isomers, and C1-substituted adamantane furanoic carboxamides is described. These new adamantane derivatives exhibited an interesting pharmacological profile in terms of trypanocidal activity and selectivity. The most active adduct with the best selectivity in this study was found to be the phenylacetoxy hydrazone 1 b (2-[4-(tricyclo[3.3.1.1^3,7]dec-1-yl)phenyl]-N′-[(5-nitrofuran-2-yl)methylene]acetohydrazide; EC₅₀=11±0.9 nm , SI_Tb=770).     

Ultrasound Synthesis of Polyindole–TiO2 Nanocomposite and Evaluation of Antibacterial Activity

The present work reports the synthesis and evaluation of antimicrobial activity of polyindole–TiO₂ nanocomposite. Polyindole–TiO₂ nanocomposite was synthesized by aqueous in situ chemical polymerization of indole using ammonium persulfate as an oxidant under ultrasonic condition. The synthesized polyindole and polyindole–TiO₂ nanocomposites were characterized by ultraviolet-visible spectroscopy, Fourier transform infrared spectroscopy, scanning electron microscope, thermogravimetric analysis, and X-ray diffraction techniques. A sharp peak at ～1,402?cm^?1 is due to the stretching vibrations of O?Ti?O bond in polyindole–TiO₂ nanocomposite. The X-ray diffraction pattern shows the major diffraction peaks at 25°C and 48°C, indicating TiO₂ in anatase form. Polyindole–TiO₂ shows maximum activity against gram-positive Staphylococcus aureus and Bacillus subtilis as compared to gram-negative Escherichia coli.     

Structure–Activity Relationship Studies of the Natural Product Gq/11 Protein Inhibitor YM-254890

G proteins act as molecular switches in G protein-coupled receptor signaling pathways and are key mediators for numerous important physiological processes. The natural product, cyclic depsipeptide YM-254890, together with the structurally similar FR900359, is the only known selective inhibitor of the G_q/11 subfamily of G proteins. We recently reported the first total synthesis of YM-254890 and FR900359, followed by synthesizing analogues to perform structure–activity relationship studies. However, incomplete information about their structure–activity relationship prevents the further development of potent and structurally simplified analogues. Herein we report the first systematic structure–activity relationship study toward the N-methyldehydroalanine moiety in YM-254890, by designing and synthesizing seven new analogues. Pharmacological characterization of the seven compounds for G_q/11-, G_i/o- and G_s-mediated signaling showed that the simplified analogue YM-19 is the most potent G_q/11inhibitor among the new analogues. This study provides information for the future design of potent and simplified YM-254890 analogues.     

Synthesis and Properties of Lipoamino Acid–Fatty Acid Mixtures: Influence of the Amphiphilic Structure

The acylation of amino acids by acid chlorides with from 8 to 12 carbon atoms in alkaline aqueous medium following Schotten–Baumann reaction results in sodium salts of a N ^α-acylamino acid and fatty acid mixture. The latter are present in a proportion from 40 to 60%. These compositions represent mixtures of amphiphilic anionic surfactants. Together they contribute to the properties of the formulation. Measurements of the surface-active properties of these formulations, such as critical micelle concentration (CMC), surface tension at the CMC (ST), foaming capacity (FC) and foaming stability (FS), show that surfactant mixtures with the longest chain have the most desirable properties. They are comparable to commercial petroleum-based surfactants. Thus, the CMC, ST and CM values of the formulation obtained starting from leucine and dodecanoyl chloride (310 mg/l, 30.1 mN/m and 200%, respectively) are similar to, and even better than, sodium dodecylsulfate (290 mg/l, 39.1 mN/m and 230%, respectively).     

Synthesis and Structure−Activity Relationships of Imidazopyridine/Pyrimidine- and Furopyridine-Based Anti-infective Agents against Trypanosomiases

Neglected tropical diseases remain among the most critical public health concerns in Africa and South America. The drug treatments for these diseases are limited, which invariably leads to fatal cases. Hence, there is an urgent need for new antitrypanosomal drugs. To address this issue, a large number of diverse heterocyclic compounds were prepared. Straightforward synthetic approaches tolerated pre-functionalized structures, giving rise to a structurally diverse set of analogs. We report on a set of 57 heterocyclic compounds with selective activity potential against kinetoplastid parasites. In general, 29 and 19 compounds of the total set could be defined as active against Trypanosoma cruzi and T. brucei brucei, respectively (antitrypanosomal activities <10 μM). The present work discusses the structure−activity relationships of new fused-ring scaffolds based on imidazopyridine/pyrimidine and furopyridine cores. This library of compounds shows significant potential for anti-trypanosomiases drug discovery.     

Synthesis and Structure–Activity Relationship Studies of Benzo[b][1,4]oxazin-3(4H)-one Analogues as Inhibitors of Mycobacterial Thymidylate Synthase X

Since the discovery of a flavin-dependent thymidylate synthase (ThyX or FDTS) that is absent in humans but crucial for DNA biosynthesis in a diverse group of pathogens, the enzyme has been pursued for the development of new antibacterial agents against Mycobacterium tuberculosis, the causative agent of the widespread infectious disease tuberculosis (TB). In response to a growing need for more effective anti-TB drugs, we have built upon our previous screening efforts and report herein an optimization campaign of a novel series of inhibitors with a unique inhibition profile. The inhibitors display competitive inhibition toward the methylene tetrahydrofolate cofactor of ThyX, enabling us to generate a model of the compounds bound to their target, thus offering insight into their structure–activity relationships.