An automated, parallel processing approach to biomolecular sample preparation

Sample preparation for DNA and RNA assays is a prime candidate for laboratory automation. A novel, parallel processing device that performs the three separate liquid-handling functions necessary for such sample preparation-dispensing, pipetting, and pressurizing-is presented. The device comprises an array of fine nozzles connected by fluidic channels to automatically and precisely distribute flow between one source and an array of points. The design principles, as well as the experimental and computational methods used to develop the device, are described. Test results, including accuracy, uniformity, volume range, and timing, are presented. The functionality of the device is demonstrated by performing a solid-phase extraction of DNA with two types of microcolumns.     

Honey bees find the shortest path: a collective flow-mediated approach

Artificial Life and Robotics - Honey bees (Apis mellifera L.) are social insects that makes frequent use of volatile pheromone signals to collectively navigate unpredictable and unknown...     

Achromatic waveguide coupling with a hybrid grating-mirror

A new grating coupler that incorporates a hybrid grating-mirror is proposed. An analysis of the device indicates that it has a much larger achromatic range than that of conventional grating couplers, as well as a relaxed fabrication requirement for the grating.     

Automatic computation of histogram threshold for lip segmentation using feedback of shape information

Threshold-based segmentation methods provide a simple and efficient way to implement lip segmentation. However, automatic computation of robust thresholds presents a major challenge. This research proposes an adaptive method for selecting the histogram threshold, based on feedback of shape information. The proposed method reduces unnecessary overhead by first comparing the initial segmentation to a reference lip shape model to decide if optimisation is required. In cases where optimisation is required, the algorithm adjusts the threshold until the segmentation is sufficiently similar to a reference shape model. The algorithm is tested on the AR Face Database by comparing the segmentation accuracy before and after optimisation. The proposed method increases the number of segmentations classified as ‘good’ (overlap above 90 %) by 7.1 % absolute, and significantly improves the segmentation in challenging cases containing facial hair.     

Low‐Cost Post‐Growth Treatments of Crystalline Silicon Nanoparticles Improving Surface and Electronic Properties

Freestanding silicon nanocrystals (Si‐ncs) offer unique optical and electronic properties for new photovoltaic, thermoelectric, and other electronic devices. A method to fabricate Si‐ncs which is scalable to industrial usage has been developed in recent years. However, barriers to the widespread utilization of these nanocrystals are the presence of charge‐trapping defects and an oxide shell formed upon ambient atmosphere exposure hindering the charge transport. Here, we exploit low‐cost post‐growth treatment routes based on wet‐etching in hydrofluoric acid plus surface hydrosilylation or annealing enabling a complete native oxide removal and a reduction of the defect density by up to two orders of magnitude. Moreover, when compared with only H‐terminated Si‐ncs we report an enhancement of the conductivity by up to a factor of 400 for films of HF etched and annealed Si‐ncs, which retain a defect density below that of untreated Si‐ncs even after several months of air exposure. Further, we demonstrate that HF etched and hydrosilylated Si‐ncs are extremely stable against oxidation and maintain a very low defect density after a long‐term storage in air, opening the possibility of device processing in ambient atmosphere.     

A system for seismocardiography-based identification of quiescent heart phases: implications for cardiac imaging

Seismocardiography (SCG), a representation of mechanical heart motion, may more accurately determine periods of cardiac quiescence within a cardiac cycle than the electrically derived electrocardiogram (EKG) and, thus, may have implications for gating in cardiac computed tomography. We designed and implemented a system to synchronously acquire echocardiography, EKG, and SCG data. The device was used to study the variability between EKG and SCG and characterize the relationship between the mechanical and electrical activity of the heart. For each cardiac cycle, the feature of the SCG indicating Aortic Valve Closure was identified and its time position with respect to the EKG was observed. This position was found to vary for different heart rates and between two human subjects. A color map showing the magnitude of the SCG acceleration and computed velocity was derived, allowing for direct visualization of quiescent phases of the cardiac cycle with respect to heart rate.     

Manifestation of <Emphasis Type="Italic">PT</Emphasis> symmetry in the exciton spectra of quantum wells

The reflection and photoluminescence excitation spectra under circular polarization of the incident light are measured in wide quantum wells whose width is much larger than the exciton Bohr radius. It is found that, in the absence of a magnetic field, the relation between the intensities of even and odd absorption peaks is reversed upon reversal of the sign of circular polarization.     

Effect of processing upon concentration and distribution of natural and iodophor-derived iodine in milk

Cream removal, pasteurization, and spray-drying of milk did not affect concentration of either natural or iodophor-derived iodine, as measured by both chemical and electrode methods, although electrode results were significantly higher. The use of iodine-131 labeled iodophor showed that only .02% of iodine was lost from milk on boiling and that 3.4% of iodophor-iodine became associated with milk casein.     

Modulation of Mechanical Interactions by Local Piezoelectric Effects

Piezoelectricity is a well‐established property of biological materials, yet its functional role has remained unclear. Here, a mechanical effect of piezoelectric domains resulting from collagen fibril organisation is demonstrated, and its role in tissue function and application to material design is described. Using a combination of scanning probe and nonlinear optical microscopy, a hierarchical structuring of piezoelectric domains in collagen‐rich tissues is observed, and their mechanical effects are explored in silico. Local electrostatic attraction and repulsion due to shear piezoelectricity in these domains modulate fibril interactions from the tens of nanometre (single fibril interactions) to the tens of micron (fibre interactions) level, analogous to modulated friction effects. The manipulation of domain size and organisation thus provides a capacity to tune energy storage, dissipation, stiffness, and damage resistance.