Nontrivial quantum effect of defect-induced magnetic moments in spin chains

Low dimensional strongly correlated systems have great potential for new quantum devices. Among them, quantum wires are actively investigated with development of new methods based on self-organized formation. For magnetic wires (chains), impurity doping, which causes inhomogeneity of magnetic interaction, can bring new magnetic properties to the systems. In the present study, the effect of inhomogeneity (defect) on magnetic chains with bond alternation is focused on. Defects induce local moments in the magnetic chains at low temperatures. However, depending on the relation of the distance between the defects, the magnetic profile is found to be drastically changed.     

Microbial communities in the garbage composting with rice hull as an amendment revealed by culture-dependent and -independent approaches

The diversity and succession of microbial communities during the garbage composting with rice hull as an amendment were studied by denaturing gradient gel electrophoresis (DGGE) and clone library analysis of PCR-amplified 16S ribosomal DNA (rDNA) with universal primers. Based on temperature changes, the composting process could be divided into thermophilic, cooling-down, and maturing stages. The DGGE profiles and clone library analysis revealed that the microbial community drastically changed during the composting process from the thermophilic to the maturing stages. The dominant bacterial group changed from the phylum Firmicutes in the thermophilic stage to the phylum Bacteroidetes in the maturing stage. This change in microbial communities may be significant for the composting process. The diversity of cultivated bacteria isolated from samples taken at various stages of the composting process was low. A total of 87 isolates were classified as belonging to only four different groups. These groups were also detected in the DGGE profiles and by the clone library analysis. Our study indicated that a combination of culture-dependent and -independent approaches could be very useful for monitoring both bacterial diversity and the succession of communities during the composting process. This study would be beneficial for assessing the ecological consequences of disposal of organic waste.     

Solidification by Convective Drying of Particle Layer Wetted with Dilute Agar Gel

Solidified porous slab is formed through convective drying of glass particle layer wetted with aqueous dilute agar gel. Measured critical mean moisture content increases with increasing initial moisture or agar content. The agar gel moves in viscous flow caused by capillary pressure during drying. A new drying model based on the receding evaporation plane model is proposed. Drying period is divided into surface and internal evaporation periods. Wet slab consists of dried and wet zones during the internal evaporation period, while the wet slab consists of wet zone only during the surface evaporation period. In the new model, the evaporation rate from the wet zone in the internal drying period is estimated with the linear driving force (LDF) approximation in the field of adsorption engineering. Critical moisture content, that is, mean moisture content between the surface and internal periods, is estimated with a mass balance on the surface. Simulated results by the new drying model with reasonable fitting parameters agree very well with measured drying data.     

Thermal stabilization of penicillolysin, a thermolabile 19 kDa Zn2+-protease, obtained by site-directed mutagenesis

Penicillolysin is a member of the clan MX and the family of M35 proteases. The enzyme is a thermolabile Zn(2+)- protease from Penicillium citrinum with a unique substrate profile. We expressed recombinant penicillolysin in Aspergillus oryzae and generated several site-directed mutants, R33E/E60R, A167E and T81P, with the intention of exploring thermal stabilization of this protein. We based our choice of mutations on the structures of homologous thermally stable enzymes, deuterolysin (EC 3.4.24.39) from A.oryzae and a peptidyl-Lys metallopeptidase (GfMEP) from the edible mushroom Grifora frondsa. The resulting mutant proteins exhibited comparable catalytic efficiency to the wild-type enzyme and some showed a higher tolerance to temperature.     

Ultra-sensitive high-speed density measurement of the “piston effect” in a critical fluid

In order to conduct a detailed investigation of the piston effect, the peculiar heat transportation phenomenon in critical fluids, an ultra-sensitive high-speed density measurement system was developed using a very thin heater, a sensitive interferometer and a large-capacity high-speed data acquisition system. As the first step of the investigation, an experiment was conducted to measure the velocity of sound in CO2 near its critical point. Short heat pulses suppressing the disturbance of natural convection were applied to a small cell filled with almost-critical CO2 fluid and were detected by the measurement system. Because the pulses propagated through the cell at the velocity of sound and were reflected several times between the cell walls, the velocity could be precisely determined by measuring the time intervals between successive reflections. The resulting velocity profile versus temperature showed good agreement with theoretical prediction and numerical simulations. This result validated the density measurement system, and it is considered that the measurement system will be a very effective tool for further studies on critical phenomena with the aid of numerical simulation.     

Genomic Instability and Cancer Risk Associated with Erroneous DNA Repair

Many cancers develop as a consequence of genomic instability, which induces genomic rearrangements and nucleotide mutations. Failure to correct DNA damage in DNA repair defective cells, such as in BRCA1 and BRCA2 mutated backgrounds, is directly associated with increased cancer risk. Genomic rearrangement is generally a consequence of erroneous repair of DNA double-strand breaks (DSBs), though paradoxically, many cancers develop in the absence of DNA repair defects. DNA repair systems are essential for cell survival, and in cancers deficient in one repair pathway, other pathways can become upregulated. In this review, we examine the current literature on genomic alterations in cancer cells and the association between these alterations and DNA repair pathway inactivation and upregulation.     

Surface properties of perfluoroalkylethyl acrylate/n-alkyl acrylate copolymers

Wetting behavior of perfluoroalkylethyl acrylate (FA)/n-alkyl acrylate (AA) copolymers with the various length of side chains of the AAs is discussed from a standpoint of surface molecular mobility. The copolymerization reactivity ratio indicates that these polymers are random copolymers. The surface properties were studied by measuring dynamic contact angle, static contact angle and freeze-dried X-ray photoelectron spectroscopy, and the bulk properties by wide-angle X-ray diffraction and differential scanning calorimetry. The advancing contact angles for water were independent of side-chain length of AAs and were almost constant at 120°. We have attributed this phenomenon to the orientation of perfluoroalkyl groups (R_f groups, C_xF_2x+1) in air, which is independent of side-chain length of AAs. On the contrary, the receding contact angles showed small values of about 45° when n numbers below 8 and increased when n numbers above 12. This can be explained as follows. High wettability during the receding process at the n numbers below 8 results from regression of R_f groups at the water–solid interface caused by minimization of the interface free energy. The low wettability during the receding process at the n numbers above 12 shows that R_f groups cannot regress due to its crystallization. This mechanism is also supported by other measurements. © 1999 John Wiley & Sons, Inc. J Appl Polym Sci 73: 1741–1749, 1999     

Methanation of CO2 with H2-reduced magnetite

The methanation reaction of CO₂ was studied with H₂-reduced magnetite. A high conversion ratio of about 0.9 (in 30 min of the reaction time) with a selectivity of nearly 100% was obtained at 300°C and at 0.1 MPa for H₂-reduced magnetite which had been prepared by passing H₂ gas for 1–5 h at 300°C. From the results of X-ray diffractometry and Mössbauer spectroscopy, and from chemical analysis of the deposited carbon, H₂-reduced magnetite is considered to decompose adsorbed CO₂ into carbon, and to incorporate the oxygen of the CO₂ into the spinel-type structure of the magnetite, associated with oxidation of the Fe²⁺ ion into Fe³⁺ ion in the magnetite. The high conversion ratio in the methanation reaction is considered to come from a higher reactivity of the elementary carbon deposited on the surface of the H₂-reduced magnetite.     

Differentiation and function of osteoclasts cultured on bone and cartilage

We examined the differentiation and resorptive function of osteoclasts (OC) cultured on the slices of calcified bone, decalcified bone and hyaline cartilage, and found that OC differentiation depends on the co-cultured substratum, as well as osteoblast-derived factors. Bone marrow-derived macrophages (BMM) were formed from marrow cells of 5 week old ddY mice and cultured for 3 days on freeze-dried slices of calcified bone, decalcified bone or cartilage, all prepared from rabbit costal bone. BMM cultured on calcified bone slices exhibited tartrate-resistant acid phosphatase (TRAP) activity and were structurally characterized by multinucleation and ruffled border development. However, on decalcified bone slices, BMM seldom became multinucleated and exhibited weak TRAP activity. BMM cultured on cartilage slices were mononuclear, devoid of TRAP activity and structurally resembled mononuclear phagocytes. In SEM observations of co-cultured slices, resorption lacunae were formed only on calcified bone slices, and not on slices of decalcified bone and cartilage. Our results, therefore, indicated that BMM could differentiate into functional OC only on calcified bone slices, suggesting a key role of calcified components in the bone matrix for the terminal OC differentiation. Then, we cultured BMM on the same slices with yeast particles. In cultures with yeast particles, BMM exhibited intense TRAP activity, developed a ruffled border-like structure and formed resorption lacunae even on decalcified bone and cartilage slices. Vacuolar-type H+-ATPase was strongly expressed along the ruffled border membranes of these OC. Only the BMM that had not incorporated yeast particles developed a ruffled border, whereas the BMM that had incorporated yeast particles did not become multinucleated and lacked a ruffled border structure. Thus, our results further suggest that, even on uncalcified substrata, the terminal differentiation of BMM into functional OC is induced by an unidentified external stimulus, which may be contained in the cell membrane of yeast particles.