Asymmetric ion track nanopores for sensor technology. Reconstruction of pore profile from conductometric measurements

We reconstruct the profile of asymmetric ion track nanopores from an algorithm developed for conductometric measurements of symmetric nanopores. The validity of the reconstruction is supported by FESEM observations. Our analysis reveals that asymmetric pores fabricated by one-sided etching are funnel-like and not conical. The analysis provides the constriction diameter and the pore profile as a function of etching time. The reconstruction of the pore profile defines the starting conditions of asymmetric nanopores at breakthrough. The deviation from the conical shape is most pronounced at the pore tip. This critical zone dominates transport properties relevant to ion conductance, selectivity, current rectification, resistive pulse sensing and biosensors. The classical cone approximation used until now underestimates the tip diameter by a factor of two. As transport processes in nanopores depend in a highly nonlinear way on the constriction diameter the presented reconstruction must be taken into account when studying ionic and molecular transport processes in asymmetric pores.     

Estimation of earthworks execution time cost by means of artificial neural networks

The paper presents a methodology for determining earthworks execution time and cost. The accurate determination of the productivity of machines working in sets is a major problem in earthworks execution planning. Earthworks are conducted in random condition and so the parameter values achieved during their realization have a random character. Using an existing database based on measurements carried out on a construction site, an artificial neural network was built. The latter was used to predict productivity for selected sets of machines and to calculate the task execution time and cost. The obtained set of results allows one to select the machinery set optimum with regard to earthworks execution cost or time.     

A study of optical properties and annealing effect on the absorption edge of pristine- and iodine-doped polyazomethine thin films

Aromatic polyazomethine (PPI) thin film have been obtained by chemical vapor deposition (CVD) method, via polycondensation process and characterized by X-ray diffraction, AFM, FTIR and detailed UV–Vis–NIR studies. Optical transmission and fundamental reflectivity spectra of the film have been examined within the spectral range 200–2500 nm. The refractive index (n), film thickness (d) and parameters of the absorption edge i.e. the optical gap (E_G) and the Urbach energy (E_U) have been found for the PPI film before and after iodine (I₂) doping. Then the annealing effect (from 25 °C every 25 °C up to 225 °C) on the absorption edge have been investigated during “in situ” spectral measurements. Amorphous character of the films allowed us to obtain the E_G and E_U values, in the way typical for amorphous semiconductors. As a result of iodine doping, the energy gap of the PPI film (2.19 eV) distinctly reduces to 1.73 eV, due to the polaron states and, simultaneously, the Urbach energy decreases. Thermal stability of the pure PPI film, being the typical feature of polyazomethines, was confirmed, while after iodine doping the film turned out to be thermo-stable only below 100 °C; then the distinct changes of the optical gap and the Urbach energy, connected with the iodine releasing process, have been presented and discussed.     

Characterisation of colloidal and particulate organic carbon in freshwaters by thermal fluorescence quenching

Three-dimensional excitation-emission matrix (EEM) fluorescence with thermal quenching has been applied to raw and size-fractionated freshwaters. To size-fractionate organic matter, sequential filtration through mixed-ester-cellulose membrane filters with nominal pore size of 1.2, 0.1 and 0.025 microm were used. Humic-like fluorophores (peaks A and C) have been found to dominate EEMs of raw and all size fractions of studied waters. Peak A fluorescence intensity has been found to be more thermally sensitive than peak C fluorescence intensity. Humic-like fluorescence intensity was generally size independent, which indicated that it was present mainly in the smallest size fraction (<0.025 microm). This was confirmed by total organic carbon (TOC) measurements. Peak T (tryptophan-like) fluorescence, that is widely associated with biological activity, exhibited a greater thermal sensitivity of fluorescence intensity in the larger size fractions, demonstrating the presence of more than one fluorophore in different size fractions at this location in optical space. Thermal fluorescence quenching provides insights into organic matter variability and associated colloidal characteristics.     

Plasma enhanced aerosol–gel deposition of Al2O3 coatings

The new plasma enhanced aerosol–gel technique has been used for alumina films preparation, in this work. This process integrates aerosol–gel deposition of films and their plasma treatment in one reactor. The alumina films deposited by aerosol–gel method on Si substrate were plasma or thermally treated. The influence of deposition and condensation conditions on properties of the films was studied. Produced coatings were characterized in terms of surface morphology (SEM, AFM) as well as crystalline and chemical structure (FTIR, XRD). Plasma discharge used for modification of the substrates prior to the deposition process improved homogeneity of produced coatings. Coatings obtained at room temperature exhibit boehmite structure which was transformed into γ-Al₂O₃ after annealing. A similar transformation was induced by low temperature oxide plasma discharge treatment for sufficiently thin coatings.     

A new reconfigurable Test Vector Generator for built-in self-test applications

This paper proposes a new approach to designing a BIST Test Vector Generator (TVG) for random vector-resistant circuits based on reconfigurable Cellular Automata Registers (CARs). Each CAR configuration is constructed by combining rules 90 and 150 and the same approach can also be applied to the Linear Feedback Shift Register (LFSR). The TVG thus designed is able to produce 100% fault coverage with short test time at the cost of low area overhead. To achieve this objective, a new method called the Rank Order Clustering (ROC) method, is introduced in order to fix a number of inputs at certain values when generating pseudorandom vectors. It is shown that the ROC method is very simple and efficient in fixing inputs at these values in terms of complexity. Experimental results have been conducted to demonstrate the applicability of the proposed approach in terms of hardware size and test application time.     

Comparative modelling and analysis of amino acid substitutions suggests that the family of pregnancy-associated glycoproteins includes both active and inactive aspartic proteinases

The pregnancy-associated glycoproteins (PAGs) are secretoryproducts synthesized by the outer epithelial cell layer (chorion)of the placentas of various ungulate species. The amino acidsequences of eight PAGs have been inferred from cloned cDNAof cattle and sheep, as well as of the non-ruminant pig andhorse. We compare the PAG sequences and present results of thethree-dimensional models of boPAG-1 and ovPAG-1 that were constructedon the basis of the crystal structures of homologous porcinepepsin and bovine chymosin using a rule-based comparative modellingapproach. Further, we compare peptide binding subsites definedby interactions with pepstatin and a decapeptide inhibitor (CH-66)modelled on the basis of crystal structures of other asparticproteinases. We have extended our analysis of the peptide bindingsubsites to the other PAG molecules of known sequence by aligningthe PAG sequences to the structural template derived from thepepsin family and by making use of the three-dimensional modelsof the boPAG-1 and ovPAG-1. The residues that are likely toaffect peptide binding in the boPAG-1, ovPAG-1 and other PAGmolecules have been identified. Sequence comparisons revealthat all PAG molecules may have evolved from a pepsin-like progenitormolecule with the equine PAG most closely related to the pepsins.The presence of substitutions at the S₁ and other subsites relativeto pepsin make it unlikely that either bovine, ovine or theporcine PAG-1 have catalytic activity. Only two of the eightPAGs examined (porcine PAG-2 and equine PAG-1) retain featuresof active aspartic proteinases with pepsin-like activity. Ourresults indicate that in the PAGs so far characterized the peptidebinding specificities differ significantly from each other andfrom pepsin, despite their high sequence identities. Analysisof the various peptide binding subsites demonstrates why bothbovine and ovine PAG-1 are capable of binding pepstatin. Thestrong negative charge in the binding cleft of boPAG-1 and ovPAG-1indicates a preference for lysine- or arginine-rich peptides.PAGs represent a family where the possible peptide binding functionmay be retained through their binding specificities, but wherethe catalytic activity may be lost in some cases, such as theboPAG-1, ovPAG-1 and the poPAG-1.