Inhibition of protein synthesis in lettuce (Latuca sativa L.) by allelopathic compounds

The effects of ferulic, cinnamic, and ellagic acids on the development of roots and protein synthesis in lettuce seedlings (Latuca sativa L., variety of Black Seeded Simpson) are reported here. Both ferulic and cinnamic acids were found to inhibit protein synthesis of the seedlings either when added from the beginning of the germination period, or when added for a short period of time to seedlings which had already germinated under control conditions. Ellagic acid, at the same pH and osmotic concentrations as the effective inhibitors, was completely ineffective in inhibiting either growth of roots or protein synthesis. It is shown that utilization of [¹⁴C] amino acid incorporation into seedlings appears to be a sensitive, reliable, and appropriate indicator of allelopathic inhibition of plant growth. Utilizing this method, it should be possible to determine if the effect on protein synthesis by putative allelopathic compounds is a general phenomenon and may, in turn, help to elucidate the role of these compounds.     

Preliminary Evidence Supporting the Ability of Hermatypic Corals to Affect Adversely Larvae and Early Settlement Stages of Hard Coral Competitors

Crude, aqueous extracts of five species of hermatypic coral from three scleractinian families were assayed for bioactivity against the early life stages of scleractinian corals. At concentrations between 62.5 and 250 μg/ml, extracts of all species were lethal to at least three of the five species of coral planulae larvae tested. To test for behavioral changes, extracts from four species were tested on planulae of the scleractinian Pocillopora damicornis. All four caused immediate but reversible behavioral aberrations in the larvae at concentrations as low as 7.8 μg/ml. To determine the effects on newly settled corals, postmetamorphosis juveniles (spat) of P. damicornis were exposed to extracts from four hermatypic species. They were either killed or suffered a reduction in growth rates. If released under natural conditions, substances with lethal or sublethal activities against the early life stages of other scleractinians could allow hermatypic corals to influence patterns of scleractinian recruitment, thus playing a role in ordering coral communities.     

Emerging Functions for snoRNAs and snoRNA-Derived Fragments

The widespread implementation of mass sequencing has revealed a diverse landscape of small RNAs derived from larger precursors. Whilst many of these are likely to be byproducts of degradation, there are nevertheless metabolically stable fragments derived from tRNAs, rRNAs, snoRNAs, and other non-coding RNA, with a number of examples of the production of such fragments being conserved across species. Coupled with specific interactions to RNA-binding proteins and a growing number of experimentally reported examples suggesting function, a case is emerging whereby the biological significance of small non-coding RNAs extends far beyond miRNAs and piRNAs. Related to this, a similarly complex picture is emerging of non-canonical roles for the non-coding precursors, such as for snoRNAs that are also implicated in such areas as the silencing of gene expression and the regulation of alternative splicing. This is in addition to a body of literature describing snoRNAs as an additional source of miRNA-like regulators. This review seeks to highlight emerging roles for such non-coding RNA, focusing specifically on “new” roles for snoRNAs and the small fragments derived from them.     

Mammalian-Cell-Driven Polymerisation of Pyrrole

A model cancer cell line was used to initiate polymerisation of pyrrole to form the conducting material polypyrrole. The polymerisation was shown to occur through the action of cytosolic exudates rather than that of the membrane redox sites that normally control the oxidation state of iron as ferricyanide or ferrocyanide. The data demonstrate for the first time that mammalian cells can be used to initiate synthesis of conducting polymers and suggest a possible route to detection of cell damage and/or transcellular processes through in situ and amplifiable signal generation.     

Farm-scale carbon and nitrogen fluxes in pastoral dairy production systems using different nitrogen fertilizer regimes

Nutrient Cycling in Agroecosystems - The nitrogen (N) fertilizer application rate (kg ha?1 year?1) in pastoral dairy systems affects the flow of N through the soil,...     

Fluorescence Anisotropy of Cellular NADH as a Tool to Study Different Metabolic Properties of Human Melanocytes and Melanoma Cells

In this study, we wanted to see if fluorescence anisotropy could be used to detect changes in metabolism in cells with significant light scattering and absorption properties. Fluorescence anisotropy measurements of nicotinamide adenine dinucleotide (NADH) were performed with human melanocytes and melanoma cell lines. To demonstrate the feasibility of using fluorescence anisotropy for detecting metabolic changes, the electron transport chain was blocked using rotenone, inducing an accumulation of intracellular NADH. Total fluorescence increased in all cells as a result of rotenone treatment. Fluorescence anisotropy decreased in the rotenone-treated cells relative to the controls, suggesting an increased ratio of free to protein-bound NADH in the treated cells. In general, the fluorescence anisotropy of the melanocytes was significantly higher than that of the melanoma cell lines. Reflectance spectroscopy showed that the differences in fluorescence anisotropy between the cell types were not due to differences in scattering and absorption properties. Intrinsic cellular NADH fluorescence was experimentally extracted by ratioing polarized fluorescence to polarized reflectance. NADH binding, measured as the ratio of fluorescence intensity at 430 and 465 nm, showed more protein-bound NADH in the melanocytes than in the melanoma cells, consistent with the fluorescence anisotropy measurements.     

Collaborative software infrastructure for adaptive multiple model simulation

This paper presents a software infrastructure being developed to support the implementation of adaptive multiple model simulations. The paper first describes an abstraction of single and multiple model simulations into the individual operational components with a focus on the relationships and transformations that relate them. Building on that abstraction, consideration is then given to how adaptively controlled multiple model simulations can be constructed using existing simulation components interacting through functional interfaces. This includes addressing how experts would provide the infrastructure with the needed components and define the relations and transformations needed to interact with other components, and for users to define the simulations they wish to be executed. Next, a discussion of the software environment used to implement the multiple model simulation infrastructure is given. Finally, there is discussion of the implementation, using this infrastructure, of two multiscale and one multiple fidelity model simulation applications.     

Core-Edge design of storage area networks—A Single-edge formulation with problem-specific cuts

Optimization and heuristic methods for the design of medium to large storage area networks (SANs) are in the early stages of development, but are required if large clustered storage systems are to become a viable alternative to expensive monolithic storage. We present here a new mixed-integer formulation for optimal design of a storage area network. Our formulation models the Single-edge Core-Edge topology. Using a testbed of medium to large problems, we compare the solution times for our new formulation to the current benchmark in the literature—our formulation solves in significantly less time with an off-the-shelf optimization software package. We also generate problem-specific cuts to further reduce the solution time for our formulation. An algorithm, which includes an integer programming subproblem, is described for generating some of these cuts. For all test problems, the cuts yield a further reduction in the solution time.     

Molecular asperity theory of boundary friction

A computer investigation of the hypothesis that boundary friction is caused by molecular forces between the tails of long-chain molecules attached vertically to the sliding surfaces is reported. It has previously been shown that the interaction statements which apply to this system are the Slater and Bartell scattering centre potentials. The Slater scattering centre potential was less accurate but was considered to see how much it affects the calculated friction.The frictional force was calculated and shown to be a two-term relation. The first term is due to the interaction energy barrier encountered when moving one surface from one equilibrium position to the next, together with the work done against internal rotation barriers. The second term is due to the lifting of one end group over the opposite one as the chains move, a molecular “asperity” friction. The calculations show that the friction rises with normal load in a manner similar to that found experimentally. As with almost all theoretical predictions of strength calculated from intermolecular potentials, these forces are some ten times too large, a discrepancy which is usually attributed to dislocations.