Crystal structures of a single coiled-coil peptide in two oligomeric states reveal the basis for structural polymorphism

Each protein sequence generally adopts a single native fold, but the sequence features that confer structural uniqueness are not well understood. To define the basis for structural heterogeneity, we determined the high resolution X-ray crystal structures of a single GCN4 leucine-zipper mutant (Asn 16 to aminobutyric acid) in both dimeric and trimeric coiled-coil conformations. The mutant sequence is accommodated in two distinct structures by forming similarly-shaped packing surfaces with different sets of atoms. The trimer structure, in comparison to a previously-characterized trimeric mutant with substitutions in eight core residues, shows that the twist of individual helices and the helix-helix crossing angles can vary significantly to produce the most favoured packing arrangement.     

Damping of a Vibrating Wire in Spin Polarized Liquid 3He-4He Mixtures

In this paper we report measurements of the damping of a vibrating wire in spin polarized liquid helium mixtures. The dilute helium solutions have been cooled by nuclear demagnetisation in high magnetic fields such that the spin polarization for a 0.04% mixture is as high 75%. A PtW alloy vibrating wire has been used to probe the viscosity of the liquid. The increase in viscosity on changing the magnetic field from 3 tesla to 11.5 tesla is a factor 3.5 at the lowest temperatures. The results are compared to theory allowing for both s-wave and p-wave scattering.     

APOE in non-Alzheimer amyloidoses: transmissible spongiform encephalopathies

We have identified a member of the VEGF family by computer-based homology searching and have designated it VEGF-D. VEGF-D is most closely related to VEGF-C by virtue of the presence of N- and C-terminal extensions that are not found in other VEGF family members. In adult human tissues, VEGF-D mRNA is most abundant in heart, lung, skeletal muscle, colon, and small intestine. Analyses of VEGF-D receptor specificity revealed that VEGF-D is a ligand for both VEGF receptors (VEGFRs) VEGFR-2 (Flk1) and VEGFR-3 (Flt4) and can activate these receptors. However. VEGF-D does not bind to VEGFR-1. Expression of a truncated derivative of VEGF-D demonstrated that the receptor-binding capacities reside in the portion of the molecule that is most closely related in primary structure to other VEGF family members and that corresponds to the mature form of VEGF-C. In addition, VEGF-D is a mitogen for endothelial cells. The structural and functional similarities between VEGF-D and VEGF-C define a subfamily of the VEGFs.     

On deceiving ourselves about deception: Reply to Rubin.

Replies to the comments of Z. Rubin (see record 1985-16257-001) on the present authors' study (see record 1984-00117-001) of the role of debriefing in ameliorating harmful effects of deception or other potentially harmful manipulations in psychology experiments. It is suggested that Rubin misunderstood the purpose of the study, which was to focus on Ss' global perceptions of their cumulative research experiences rather than the specific effects of particular kinds of experimental manipulations. (2 ref) (PsycINFO Database Record (c) 2010 APA, all rights reserved)     

Use of retinal biopsy to diagnose Bartonella (formerly Rochalimaea) henselae retinitis in an HIV-infected patient

A patient with the acquired immunodeficiency syndrome developed bilateral retinitis due to a Bartonella (formerly Rochalimaea) henselae infection. A retinal biopsy was performed when severe and progressive retinal infection failed to respond to empirical treatment for cytomegalovirus and Toxoplasma gondii. The biopsy specimen was stained with routine histopathological stains and the Steiner silver stain. Ribosomal DNA was extracted from formalinfixed, paraffin-embedded retinal tissue and amplified with the polymerase chain reaction assay, using Bartonella-specific primers. The amplified DNA fragment was cloned and sequenced. Staining with hematoxylin-eosin revealed tufts of proliferating vascular endothelium with numerous fusiformappearing cells, consistent with a diagnosis of bacillary angiomatosis. A Steiner silver stain revealed numerous small bacilli in the biopsy specimen. Amplification of DNA extracted from the tissue produced a fragment of 16S ribosomal DNA of the expected size; sequencing of the DNA fragment revealed that the infection was caused by B henselae. The retinal infection was treated with minocycline, doxycycline, and ciprofloxacin with improvement in visual acuity in the ensuing 12 weeks. To our knowledge, this is the first human immunodeficiency virus-infected patient with retinitis due to B henselae who was diagnosed by the identification of silver-staining bacilli and amplification and sequencing of B henselae with a polymerase chain reaction assay using a biopsy specimen of retinal tissue. Retinal biopsy is indicated, despite its potential for serious complications, in patients with acquired immunodeficiency syndrome who have a progressive, sight-threatening retinitis that is undiagnosed and unresponsive to therapy.     

DOCPRO — a dynamic simulator for chemical processes

The design principles of DOCPRO — a dynamic simulator for chemical processes, are discussed. The system permits great flexibility in the input data and by retaining all process information on files, enhances the ability of the user to interface with a simulation system at a higher level than hitherto permitted.