DIAGENETIC HISTORY OF LATE PALAEOCENE POTENTIAL CARBONATE RESERVOIR ROCKS, KOPET-DAGH BASIN, NE IRAN

The Upper Palaeocene (Thanetian) Chehel-Kaman Formation in the Kopet-Dagh Basin of NE Iran is principally composed of carbonates with minor siliciclastics and evaporites. Six stratigraphic sections were measured and more than 1,000 samples were collected for petrographic analysis, together with analyses of carbon and oxygen isotopes and trace element content. Four major carbonate lithofacies (and 13 subfacies) have been identified in previous studies and are interpretd in terms of deposition in a shallow-marine environment.
The petrographic analyses indicate that the Chehel-Kaman Formation carbonates have undergone a complex diagenetic history which includes compaction, cementation, micritization, dissolution, silicification, dolomitization, neomorphism and fracturing. δ¹⁸O and δ¹³C values in Chehel-Kaman Formation limestones range between +0.8 and -15.1%₀ PDB, and -2.82 and +3.5%₀ PDB, respectively. These variations are interpreted to reflect meteoric and burial diagenetic processes. Variations in trace-element concentrations (Fe and Mn increased while Na decreased) also indicated the effects of meteoric flushing. The limestones appear to have been formed at about 28°C.
Chehel-Kaman Formation dolomites were divided into d1 (finely-crystalline) and d2 (coarsely-crystalline) types. Petrographic and geochemical results indicated that the d1 dolomites formed under sabkha conditions from a parental solution at around 26°C, while d2 dolomites formed during burial diagenesis with much hotter pore fluids (around 72°C). The paragenetic sequence indicates that primary porosity decreased during early stages of diagenesis, although secondary porosity was subsequently created improving the reservoir quality of the carbonates.     

Laser Heating Tunability by Off‐Resonant Irradiation of Gold Nanoparticles

Temperature changes in the vicinity of a single absorptive nanostructure caused by local heating have strong implications in technologies such as integrated electronics or biomedicine. Herein, the temperature changes in the vicinity of a single optically trapped spherical Au nanoparticle encapsulated in a thermo‐responsive poly(N‐isopropylacrylamide) shell (Au@pNIPAM) are studied in detail. Individual beads are trapped in a counter‐propagating optical tweezers setup at various laser powers, which allows the overall particle size to be tuned through the phase transition of the thermo‐responsive shell. The experimentally obtained sizes measured at different irradiation powers are compared with average size values obtained by dynamic light scattering (DLS) from an ensemble of beads at different temperatures. The size range and the tendency to shrink upon increasing the laser power in the optical trap or by increasing the temperature for DLS agree with reasonable accuracy for both approaches. Discrepancies are evaluated by means of simple models accounting for variations in the thermal conductivity of the polymer, the viscosity of the aqueous solution and the absorption cross section of the coated Au nanoparticle. These results show that these parameters must be taken into account when considering local laser heating experiments in aqueous solution at the nanoscale. Analysis of the stability of the Au@pNIPAM particles in the trap is also theoretically carried out for different particle sizes.     

Liquid Crystal Enabled Early Stage Detection of Beta Amyloid Formation on Lipid Monolayers

Liquid crystals (LCs) can serve as sensitive reporters of interfacial events, and this property has been used for sensing of synthetic or biological toxins. Here it is demonstrated that LCs can distinguish distinct molecular motifs and exhibit a specific response to beta‐sheet structures. That property is used to detect the formation of highly toxic protofibrils involved in neurodegenerative diseases, where it is crucial to develop methods that probe the early‐stage aggregation of amyloidogenic peptides in the vicinity of biological membranes. In the proposed method, the amyloid fibrils formed at the lipid–decorated LC interface can change the orientation of LCs and form elongated and branched structures that are amplified by the mesogenic medium; however, nonamyloidogenic peptides form ellipsoidal domains of tilted LCs. Moreover, a theoretical and computational analysis is used to reveal the underlying structure of the LC, thereby providing a detailed molecular‐level view of the interactions and mechanisms responsible for such motifs. The corresponding signatures can be detected at nanomolar concentrations of peptide by polarized light microscopy and much earlier than the ones that can be identified by fluorescence‐based techniques. As such, it offers the potential for early diagnoses of neurodegenerative diseases and for facile testing of inhibitors of amyloid formation.     

Gene expression during activation of Paracoccidioides brasiliensis conidia

This study focuses on gene expression during crucial biological phenomena of the dimorphic fungal human pathogen Paracoccidioides brasiliensis, the conidia‐to‐yeast (C‐Y) transition and the conidia‐to‐mycelia (C‐M) germination. We studied 10 genes involved in different cellular functions: oxidative stress response (alternative oxidase (AOX), superoxide dismutase (SOD), flavodoxin, conserved hypothetical protein (Y20)); cell metabolism (glyceraldehyde‐3‐phosphate dehydrogenase (GADPH), cholestenol Delta‐isomerase (ChDI), glycine dehydrogenase (GDh)) and heat shock response (Heat shock protein 90 (HSP90)), and cell synthesis and wall structure (glucan synthase‐1 (GS‐1), α‐1,3‐glucan synthase (αGS), and mannosyltransferase (MT)). Gene expression was measured during the first 72 h and 96 h of C‐Y and C‐M, respectively, previously shown to be a fundamental time frame for the consolidation of these cellular processes. The gene expression of AOX, GAPDH, HSP90, MT, αGS, and GDh was significantly increased during the C‐Y transition, while SOD, ChDI, GAPDH, MT, GDh, and GS‐1 were increased during C‐M germination. Additionally, some were highly expressed in each process: AOX, HSP90, and αGS during C‐Y; SOD, ChDI, and GS‐1 during C‐M. Altogether, these data add new information regarding gene expression during the C‐Y and C‐M processes. Future research will be targeted to further characterize the true relevance of the studied genes during the morphological transition, either during adaptation to the environment or to the infected host. Copyright © 2011 John Wiley & Sons, Ltd.     

Chitosan as template for the synthesis of ceria nanoparticles

Cerium oxide (CeO₂), nanoparticles were prepared using chitosan as template, cerium nitrate as a starting material and sodium hydroxide as a precipitating agent. The resultant ceria–chitosan spheres were calcined at 350 °C. The synthesized powders were characterized by, XRD, HRTEM, UV–vis, FTIR, and TG-DTA. The average size of the nanoparticles obtained was ∼4 nm and BET specific surface area ∼105 m² g⁻¹. Blueshifts in the ultraviolet absorption spectra have been observed in cerium oxide nanocrystallites. The band-gap was found to be 4.5 eV. The blueshifts are well explained for diameters down to less than a few nanometers by the change in the electronic band structure.     

Aquaporin Gating: A New Twist to Unravel Permeation through Water Channels

Aquaporins (AQPs) are small transmembrane tetrameric proteins that facilitate water, solute and gas exchange. Their presence has been extensively reported in the biological membranes of almost all living organisms. Although their discovery is much more recent than ion transport systems, different biophysical approaches have contributed to confirm that permeation through each monomer is consistent with closed and open states, introducing the term gating mechanism into the field. The study of AQPs in their native membrane or overexpressed in heterologous systems have experimentally demonstrated that water membrane permeability can be reversibly modified in response to specific modulators. For some regulation mechanisms, such as pH changes, evidence for gating is also supported by high-resolution structures of the water channel in different configurations as well as molecular dynamics simulation. Both experimental and simulation approaches sustain that the rearrangement of conserved residues contributes to occlude the cavity of the channel restricting water permeation. Interestingly, specific charged and conserved residues are present in the environment of the pore and, thus, the tetrameric structure can be subjected to alter the positions of these charges to sustain gating. Thus, is it possible to explore whether the displacement of these charges (gating current) leads to conformational changes? To our knowledge, this question has not yet been addressed at all. In this review, we intend to analyze the suitability of this proposal for the first time.     

Extracting Stray Magnetic Fields from Thin Ferromagnetic Layers in Hybrid Superconducting/Ferromagnetic Heterostructures

Journal of Superconductivity and Novel Magnetism - Hybrid Nb(20)/Cu(5)/Py(2), Nb(20)/Cu(5)/Co(40) and Nb(20)/Cu(d $$_{Cu}$$ )/Py(2)/Cu(5)/Co(40) heterostructures (values in nanometers and d...     

Electrical and Optical Characterization of Melt-Grown Bulk InAs<Subscript>1−<Emphasis Type="Italic">y</Emphasis></Subscript>P<Subscript><Emphasis Type="Italic">y</Emphasis></Subscript> Crystals

Bulk ternary InAs_1−y P _y polycrystals with diameters up to 50 mm were grown from a pseudobinary InP-InAs melt using the vertical Bridgman technique. Electrical and optical properties were investigated as functions of alloy composition and sample temperature. As-grown undoped crystals have been found to exhibit n-type conductivity irrespective of alloy composition. Though the bulk InAs_1−y P _y substrates show high optical transmission out to long wavelengths as well as high carrier mobility, they exhibit random compositional fluctuations across the substrate area.     

Boundary Element Modeling of the Realistic Human Body Exposed to Extremely-Low-Frequency (ELF) Electric Fields: Computational and Geometrical Aspects

This paper presents the human exposure assessment to high-voltage extremely-low-frequency (ELF) fields by the three-dimensional (3-D) boundary element method (BEM). The formulation is based on a realistic, anatomically based representation of the human body. The main objective is to analyze the influence of the relative position of the arms with respect to the body on the axial distribution of current density along the body and to determine the most vulnerable regions. Numerical results along head, neck, torso, abdomen, arms, legs, and ankles are presented and discussed in the case of grounded subject standing under power-distribution lines and in the vicinity of power transformer substations