Prediction of a New Ligand-Binding Site for Type 2 Motif based on the Crystal Structure of ALG-2 by Dry and Wet Approaches

ALG-2 is a penta-EF-hand Ca(2+)-binding protein and interacts with a variety of intracellular proteins. Two types of ALG-2-binding motifs have been determined: type 1, PXYPXnYP (X, variable; n = 4), in ALIX and PLSCR3; type 2, PXPGF, in Sec31A and PLSCR3. The previously solved X-ray crystal structure of the complex between ALG-2 and an ALIX peptide containing type 1 motif showed that the peptide binds to Pocket 1 and Pocket 2. Co-crystallization of ALG-2 and type 2 motif-containing peptides has not been successful. To gain insights into the molecular basis of type 2 motif recognition, we searched for a new hydrophobic cavity by computational algorithms using MetaPocket 2.0 based on 3D structures of ALG-2. The predicted hydrophobic pocket designated Pocket 3 fits with N-acetyl-ProAlaProGlyPhe-amide, a virtual penta-peptide derived from one of the two types of ALG-2-binding sites in PLSCR3 (type 2 motif), using the molecular docking software AutoDock Vina. We investigated effects of amino acid substitutions of the predicted binding sites on binding abilities by pulldown assays using glutathione-S-transferase -fused ALG-2 of wild-type and mutant proteins and lysates of cells expressing green fluorescent protein -fused PLSCR3 of wild-type and mutants. Substitution of either L52 with Ala or F148 with Ser of ALG-2 caused loss of binding abilities to PLSCR3 lacking type 1 motif but retained those to PLSCR3 lacking type 2 motif, strongly supporting the hypothesis that Pocket 3 is the binding site for type 2 motif.     

α-Amylase immobilization capacities of mesoporous silicas with different morphologies and surface properties

α-Amylase was encapsulated in several mesoporous materials (folded sheet mesoporous silica (FSM), cubic mesoporous silica (KIT-6), and two-dimensional hexagonal mesoporous silica (SBA-15)) that differed morphologically in terms of particle shape, pore size, and pore structure. The encapsulation capacity and thermal stability of encapsulated α-amylase were examined. The amount of α-amylase encapsulated increased with increasing pore size in the following order: SBA-15 < KIT-6 < FSM. Nitrogen adsorption experiments were performed before and after α-amylase encapsulation in mesoporous silicas with pore sizes larger than the size of α-amylase, confirming that α-amylase was encapsulated in the pores. Among mesoporous silicas with similar pore sizes, FSM was found to have the highest capacity for α-amylase encapsulation both per weight and per surface area of silica. Furthermore, α-amylase encapsulated in FSM demonstrated high thermal stability at 90 °C relative to the thermal stability of free α-amylase or free α-amylase encapsulated in other mesoporous silicas. Zeta potential measurements showed that the FSM surface had an isoelectric point that was lower than that of other mesoporous silicas, and hydrophilicity measurements showed that its surface was more hydrophilic. The surface properties of FSM contributed to the high thermal stability of the α-amylase encapsulated within the pores.     

Progress in pressureless sintering of boron carbide ceramics – a review

ABSTRACT

Boron carbide (B₄C) ceramics has many outstanding performance, such as extremely high hardness, low density, high melting point, high elastic modulus, high thermoelectromotive force, high chemical resistance, high neutron absorption cross section, high impact and excellent wear resistance. Therefore, B₄C ceramics can be used in various industrial applications, such as lightweight ceramic armour, high temperature thermocouples, neutron absorber, reactor control rods in nuclear power engineering, polishing media for hard materials, abrasive media for lapping and grinding, and wear resistant components (blasting nozzles, die tips and grinding wheels). Pressureless sintering is the method with industrialised application value for B₄C ceramics, however, it is impossible to sinter pure B₄C ceramics to high densities without additives by pressureless sintering. So sintering additives must be used to promote the densification of B₄C ceramics. The different sintering additives used to promote the densification of boron carbide will be described in this review, including carbon additives, metallic additives, oxide additives, non-oxide additives, combined additives and rare earth oxide additives. Finally, the recent research trends for sintering methods and sintering additives of B₄C ceramics will also be proposed.     

Room temperature aging behavior of Ti-Nb-Mo-based superelastic alloys

The effect of room temperature (RT) aging on the superelasticity of Ti-Nb-Mo-based superelastic alloys is investigated. The results show that annealing at relatively low temperatures such as 973 K after severe cold rolling results in poor resistance to the effect of RT aging. The transformation stress increases considerably due to the formation of an isothermal ω phase at RT. Addition of Sn is partially effective in suppressing the RT aging effect in the specimens annealed at 973 K. The RT aging effect is suppressed by increasing the annealing temperature, due to the annihilation of lattice defects or non-equilibrium vacancies introduced during cold rolling, which are responsible for accelerating the diffusion process, however, superelasticity is reduced by annealing at higher temperatures, due to a decrease in the critical stress for slip deformation (σ_CSS). The specimen annealed at 1173 K followed by aging at 773 K exhibits stable superelasticity with a high resistance to the effect of RT aging. Annealing at 1173 K causes the annihilation of lattice defects or non-equilibrium vacancies, while aging at 773 K induces precipitation of the α phase, which in turn causes an increase in σ_CSS, and further enhances the resistance to the RT aging effect by enriching the matrix with β-stabilizing elements.     

Crystal structure and physical properties of a magnetic molecular conductor (EDO-TTFVODS)2FeCl4

Crystal structure, and electrical conducting and magnetic properties of a radical cation salt of EDO-TTFVODS with magnetic FeCl₄^? ion, (EDO-TTFVODS)₂FeCl₄ (EDO-TTFVODS = ethylenedioxytetrathiafulvalenoquinone-1,3-diselenolemethide) are reported. In this salt, there are two independent donor molecules formed two different layers A and B, and the counter FeCl₄^? ions layer is sandwiched between two donor layers A and B along the b-axis. The donor molecules form the one-dimensional columns along the a-axis in both donor layers. This salt shows high conductivity at room temperature (σ_RT = 25 S cm^?1) and a metallic behavior down to ca. 80 K, where a metal–insulator transition however occurs. The magnetic susceptibility obeys a Curie–Weiss law (Curie constant C = 4.42 emu K mol^?1 and Weiss temperature Θ = ?1.5 K), without any magnetic ordering down to 1.8 K. This result suggests the weak antiferromagnetic interaction between the d spins of FeCl₄^? ions.     

Influences of the electron donor groups on the properties of thiophene-(N-aryl)pyrrole-thiophene-based organic sensitizers

In this study, 1-(2,6-diisopropylphenyl)-2,5-di(2-thienyl)pyrrole-based metal-free organic dyes containing three different non planar electron donor groups such as methoxy or hexyloxy substituted triphenylamine and difluorenephenylamine were prepared in order to see the effect of electron donor groups on the opto-electrical properties and applied in dye-sensitized solar cells (DSSC). All three dyes showed broad absorption band in visible part of the solar spectrum (∼300 nm–600 nm). The dye (TPTDYE-3) containing sterically less hindered methoxy substituted triphenylamine was found to show relatively red shifted absorption compared to that of the dye (TPTDYE-4) containing hexyloxy substituted triphenylamine or the dye (TPTDYE-5) containing difluorenephenylamine. The optical band gaps of the three dyes were calculated to be 2.19 eV, 2.22 eV and 2.24 eV, respectively, and the highest occupied molecular orbital (HOMO) energy levels of the three dyes were found to be located at 0.65 V, 0.68 V and 0.75 V, respectively. The DSSC performance of each dye was investigated with and without coadsorbent. The maximum solar to electrical energy conversion efficiencies (η) of the DSSCs made from only sensitizer were 4.18%, 5.28% and 5.42% while those of the DSSCs made from sensitizer with coadsorbent were 5.47%, 5.58% and 5.63%, respectively.     

Degradation behavior of moduli in extruded pure magnesium during low- to giga-scale cyclic tension fatigue

The mechanical properties of extruded pure magnesium during cyclic tension fatigue in the low- to giga-scale regime at room temperature have been investigated using ultrasonic reflection methods with longitudinal and shear waves. The acoustic velocities and calculated Young’s and shear moduli decreased by a large percentage with an increase in the number of cycles in all cycle modes due to growth of grain boundary voids. The eventual degradation of the properties was largest during giga-cycle fatigue, in which the moduli decreased by ～9%. The elastic behavior depended on the drive stress and the number of cycles rather than on fatigue time. Longitudinal and shear wave propagation characteristics and investigations of a grain boundary before and after fatigue using electron backscatter diffraction based on field-emission scanning electron microscopy and focused ion beam transmission electron microscopy revealed that the largest boundary void gap width was less than several nanometers (almost closed). The Poisson’s ratio and bulk modulus were affected notably by the void gap, in which the threshold corresponds to the longitudinal wave amplitude. Other damage phase data were determined using scanning electron microscopy, Vickers hardness, and surface roughness tests under progressive fatigue; these results also indicated slight grain boundary degradation.     

Water Vapor Adsorption and Desorption on Materials Hydrothermally Solidified from Clay Minerals

Water vapor isotherms were examined and ¹H-magic-angle spinning nuclear magnetic resonance (¹H-MAS NMR) analysis was conducted to determine the amount of water vapor adsorbed and desorbed on hydrothermally solidified materials derived from clay minerals. The amount of water vapor adsorbed and desorbed decreased with increasing mesopore volume of the materials, which disagreed with the estimation obtained using the Kelvin equation. Water vapor was physisorbed on alumina-like sites in the materials. An increase in the binding energy between water vapor and the materials led to an improvement in the water vapor adsorption–desorption properties of materials.     

Laser-Sintered Barium Titanate

Laser sintering of alkoxy-derived ultrafine BaTiO₃ powders was investigated. The temperature increases of the sample with laser irradiation were measured with a thermocouple. It was found that laser irradiation could generate enough heat to sinter ceramics. A slurry was prepared by mixing an alkoxy-derived BaTiO₃ powder, binder additives, solvent, and plasticizer. The slurry was tape cast and dried to give a green sheet. The green sheet was laser sintered and was then characterized by SEM, XRD, and density measurements. The effect of burnout before laser irradiation and the characteristic microstructure of laser-sintered BaTiO₃ are described.     

Differences in Sterol Composition between Male and Female Gonads of Dominant Limpet Species

The present study demonstrated here for the first time that there are statistically significant differences in sterol composition between male and female gonads of the dominant limpets Cellana grata and Cellana toreuma, which are intertidal gastropods. Among 11 different sterols identified in this study, unusually high levels (11.2–19.8% of total sterols) of the Δ⁸-sterols 5α-cholest-8-en-3β-ol (zymostenol) and 5α-cholesta-8,24-dien-3β-ol (zymosterol), which have never been reported in aquatic invertebrate gonads, were present in only the male gonads.