A Library-Based Approach to Task Parallelism in a Data-Parallel Language

Pure data-parallel languages such as High Performance Fortran version 1 (HPF) do not allow efficient expression of mixed task/data-parallel computations or the coupling of separately compiled data-parallel modules. In this paper, we show how these common parallel program structures can be represented, with only minor extensions to the HPF model, by using a coordination library based on the Message Passing Interface (MPI). This library allows data-parallel tasks to exchange distributed data structures using calls to simple communication functions. We present microbenchmark results that characterize the performance of this library and that quantify the impact of optimizations that allow reuse of communication schedules in common situations. In addition, results from two-dimensional FFT, convolution, and multiblock programs demonstrate that the HPF/MPI library can provide performance superior to that of pure HPF. We conclude that this synergistic combination of two parallel programming standards represents a useful approach to task parallelism in a data-parallel framework, increasing the range of problems addressable in HPF without requiring complex compiler technology.     

Non‐Covalent Functionalization of Graphene Using Self‐Assembly of Alkane‐Amines

A simple, versatile method for non‐covalent functionalization of graphene based on solution‐phase assembly of alkane‐amine layers is presented. Second‐order Møller–Plesset (MP2) perturbation theory on a cluster model (methylamine on pyrene) yields a binding energy of ≈220 meV for the amine–graphene interaction, which is strong enough to enable formation of a stable aminodecane layer at room temperature. Atomistic molecular dynamics simulations on an assembly of 1‐aminodecane molecules indicate that a self‐assembled monolayer can form, with the alkane chains oriented perpendicular to the graphene basal plane. The calculated monolayer height (≈1.7 nm) is in good agreement with atomic force microscopy data acquired for graphene functionalized with 1‐aminodecane, which yield a continuous layer with mean thickness ≈1.7 nm, albeit with some island defects. Raman data also confirm that self‐assembly of alkane‐amines is a non‐covalent process, i.e., it does not perturb the sp² hybridization of the graphene. Passivation and adsorbate n‐doping of graphene field‐effect devices using 1‐aminodecane, as well as high‐density binding of plasmonic metal nanoparticles and seeded atomic layer deposition of inorganic dielectrics using 1,10‐diaminodecane are also reported.     

Wireless underground sensor networks: Research challenges

This work introduces the concept of a Wireless Underground Sensor Network (WUSN). WUSNs can be used to monitor a variety of conditions, such as soil properties for agricultural applications and toxic substances for environmental monitoring. Unlike existing methods of monitoring underground conditions, which rely on buried sensors connected via wire to the surface, WUSN devices are deployed completely belowground and do not require any wired connections. Each device contains all necessary sensors, memory, a processor, a radio, an antenna, and a power source. This makes their deployment much simpler than existing underground sensing solutions. Wireless communication within a dense substance such as soil or rock is, however, significantly more challenging than through air. This factor, combined with the necessity to conserve energy due to the difficulty of unearthing and recharging WUSN devices, requires that communication protocols be redesigned to be as efficient as possible. This work provides an extensive overview of applications and design challenges for WUSNs, challenges for the underground communication channel including methods for predicting path losses in an underground link, and challenges at each layer of the communication protocol stack.     

Metabolic Pathways for Observed Impacts of Crop Load on Floral Induction in Apple

The triggers of biennial bearing are thought to coincide with embryonic development in apple and occurs within the first 70 days after full bloom (DAFB). Strong evidence suggests hormonal signals are perceived by vegetative apple spur buds to induce flowering. The hormonal response is typically referred to as the floral induction (FI) phase in bud meristem development. To determine the metabolic pathways activated in FI, young trees of the biennial bearing cultivar ‘Nicoter’ and the less susceptible cultivar ‘Rosy Glow’ were forced into an alternate cropping cycle over five years and an inverse relationship of crop load and return bloom was established. Buds were collected over a four-week duration within 70 DAFB from trees that had maintained a four-year biennial bearing cycle. Metabolomics profiling was undertaken to determine the differentially expressed pathways and key signalling molecules associated with biennial bearing. Marked metabolic differences were observed in trees with high and low crop load treatments. Significant effects were detected in members of the phenylpropanoid pathway comprising hydroxycinnamates, salicylates, salicylic acid biosynthetic pathway intermediates and flavanols. This study identifies plant hormones associated with FI in apples using functional metabolomics analysis.     

Real-time quality authentication of honey using atmospheric pressure chemical ionisation mass spectrometry (APCI-MS)

The aim of this study was to use gas chromatography-mass spectrometry (GC-MS) and APCI-MS techniques to detect adulteration in honey. The key volatile compounds in the headspace of the adulterated honey were marked by GC-MS and their representative fragment ions were utilised in scanning honey samples using the real-time APCI-MS system. The PLS models validated using independent data sets resulted in coefficient of the determination () of 0.97 and 0.96 and root mean square error in prediction (RMSEP) of 2.62 and 2.45 for the GC-MS and APCI-MS data sets respectively. The most efficient volatiles from GC-MS analysis and their corresponding fragment ions m/z from APCI-MS data analysis were then identified and used to develop new PLS models to predict the level of adulteration. The best PLS model gave of 0.95 and RMEP of 2.60% in the independent validation set indicating that the model was very accurate in predicting the level of adulteration.     

Deposition of calcium hydroxyapatite on negatively charged polyphosphazene surfaces

A number of polyphosphazenes with negatively charged β‐alanine (β‐Ala) and γ‐amino butyric acid (GABA) side groups were synthesized and studied for their ability to initiate the growth of hydroxyapatite (HAp) during exposure to simulated body fluid (SBF). All the polymers were hydrolytically sensitive, with the final hydrolysis rate dependent on the specific active side groups (GABA > β‐Ala). These systems also underwent extensive mineralization, with calcium phosphate deposited across their entire surface during exposure to SBF (up to 115 wt % gain after 4 weeks). This degree of deposition is a major advance over previously reported polyphosphazene systems, which underwent a maximum of 27 wt % gain after immersion in SBF for 4 weeks. The extent of mineralization over the surface was monitored using environmental scanning electron microscopy (ESEM) coupled with energy dispersive X‐ray spectroscopy (EDS). In addition, X‐ray diffraction (XRD) was used to determine the identity of the mineralized material. © 2014 Wiley Periodicals, Inc. J. Appl. Polym. Sci. 2015 , 132, 41741.     

Domain Wall Motion Across Various Grain Boundaries in Ferroelectric Thin Films

Domain wall movement at and near engineered 10°, 15°, and 24° tilt and 10° and 30° twist grain boundaries was measured by band excitation piezoresponse force microscopy for Pb(Zr,Ti)O₃ films with Zr/Ti ratio of 45/55 and 52/48. A minimum in nonlinear response was observed at the grain boundary for the highest angle twist and tilt grain boundaries, while a maximum in nonlinear response was observed at the 10° tilt grain boundaries. The observed nonlinear response was correlated with the domain configurations imaged in cross section by transmission electron microscopy.     

On-road experiment to assess drivers’ detection of roadside targets as a function of headlight system,target placement,and target reflectance

Adaptive headlights swivel with steering input to keep the beams on the roadway as drivers negotiate curves. To assess the effects of this feature on driver’s visual performance, a field experiment was conducted at night on a rural, unlit, and unlined two-lane road during which 20 adult participant drivers searched a set of 60 targets. High- (n = 30) and low- (n = 30) reflectance targets were evenly distributed on straight road sections and on the inside or outside of curves. Participants completed three target detection trials: once with adaptive high-intensity discharge (HID) headlights, once with fixed HID headlights, and once with fixed halogen headlights. Results indicated the adaptive HID headlights helped drivers detect targets that were most difficult to see (low reflectance) at the points in curves found by other researchers to be most crucial for successful navigation (inside apex). For targets placed on straight stretches of road or on the outside of curves, the adaptive feature provided no significant improvement in target detection. However, the pattern of results indicate that HID lamps whether fixed or adaptive improved target detection somewhat, suggesting that part of the real world crash reduction measured for this adaptive system (Highway Loss Data Institute (HLDI), 2012a) may be due to the differences in the light source (HID vs. halogen). Depending on the scenario, the estimated benefits to driver response time associated with the tested adaptive (swiveling HID) headlights ranged from 200 to 380 ms compared with the fixed headlight systems tested.