A Glass–Ceramic Derived from High TiO2-Containing Slag: Microstructural Development and Mechanical Behavior

A novel glass–ceramic material was developed from the melt of a TiO₂-containing iron-making slag with additional waste glass. The high percentage (∼20 wt% TiO₂) of this network-modifying oxide has promoted a crystallization of the parent glass, resulting in a fine-grained, homogeneous polycrystalline material with high mechanical properties ( E =120 GPa, flexural strength=∼180 MPa, and Vickers hardness=7 GPa) after a heat treatment at 1100°C for 2 h. The room temperature and elevated temperature fracture toughness were also studied. The main crystalline phases of the glass–ceramic material were of the pyroxene series until heat-treatment temperature reached 1000°C, at which titanium-rich perovskite and armalcolite crystals became the dominant phases. The end material is high-strength, aesthetically acceptable (metallic gray or opaque brown colored), and suitable for structural and architectural applications.     

Fabrication of patterned porous silicon using high-energy ion irradiation

P-type silicon has been patterned using high-energy protons beam prior to electrochemical etching in hydrofluoric acid. The ion beam selectively damages the silicon lattice, resulting in an increase in the local resistivity of the irradiated regions. It is found that the photoluminescence intensity of the irradiated regions increases with proton irradiation into a 0.02 Ω.cm resistivity p-type silicon. By immersing the etched sample into potassium hydroxide, the porous silicon is removed to reveal the underlying three-dimensional structure of the patterned area.     

Towards a smooth design process for static communicative node‐link diagrams

Node‐link infographics are visually very rich and can communicate messages effectively, but can be very difficult to create, often involving a painstaking and artisanal process. In this paper we present an investigation of node‐link visualizations for communication and how to better support their creation. We begin by breaking down these images into their basic elements and analyzing how they are created. We then present a set of techniques aimed at improving the creation workflow by bringing more flexibility and power to users, letting them manipulate all aspects of a node‐link diagram (layout, visual attributes, etc.) while taking into account the context in which it will appear. These techniques were implemented in a proof‐of‐concept prototype called GraphCoiffure, which was designed as an intermediary step between graph drawing/editing software and image authoring applications. We describe how GraphCoiffure improves the workflow and illustrate its benefits through practical examples.     

Dynamic analysis of Java program concepts for visualization and profiling

Concept assignment identifies units of source code that are functionally related, even if this is not apparent from a syntactic point of view. Until now, the results of concept assignment have only been used for static analysis, mostly of program source code. This paper investigates the possibility of using concept information within a framework for dynamic analysis of programs. The paper presents two case studies involving a small Java program used in a previous research exercise, and a large Java virtual machine (the popular Jikes RVM system). These studies investigate two applications of dynamic concept information: visualization and profiling. The paper demonstrates two different styles of concept visualization, which show the proportion of overall time spent in each concept and the sequence of concept execution, respectively. The profiling study concerns the interaction between runtime compilation and garbage collection in Jikes RVM. For some benchmark cases, we are able to obtain a significant reduction in garbage collection time. We discuss how this phenomenon might be harnessed to optimize the scheduling of garbage collection in Jikes RVM.     

A Level-Set Method for Computing the Eigenvalues of Elliptic Operators Defined on Compact Hypersurfaces

We demonstrate, through separation of variables and estimates from the semi-classical analysis of the Schrödinger operator, that the eigenvalues of an elliptic operator defined on a compact hypersurface in ? ⁿ can be found by solving an elliptic eigenvalue problem in a bounded domain Ω?? ⁿ . The latter problem is solved using standard finite element methods on the Cartesian grid. We also discuss the application of these ideas to solving evolution equations on surfaces, including a new proof of a result due to Greer (J. Sci. Comput. 29(3):321–351, 2006).     

Engineering of protein epitopes: a single deletion in a snake toxin generates full binding capacity to a previously unrecognized antibody

Structural features associated with the ability of a monoclonalantibody (mAb) to discriminate between protein variants areidentified and engineered. The variants are the curaremimetictoxin from Naja nigricollis and erabutoxin a or b from Laticaudasemifasciata which differ from each other by 16 substitutionsand one insertion. The neutralizing mAb M1 recognizes with highaffinity a topographical epitope on the surface of toxin , butfails to recognize the erabutoxins although they possess mostof the residues forming the presumed epitope. Examinations ofthe toxin and erabutoxin 3-D structures and molecular dynamicssimulations reveal several differences between the variants.In particular, the region involving the ß-turn 17–24is organized differently. Analysis of the differences foundin this region suggests that the insertion (or deletion) atposition 18 of the variant amino add sequences is particularlyimportant in determining the differential cross-reactivity.To test this proposal, residue 18 was deleted in one erabutoxinusing sitedirected mutagenesis, and the biological propertiesof the resulting mutant were examined. We found that full antigenicitywas restored in the previously unrecognized variant. The implicationsof this finding are discussed.     

Bacteria-Responsive Self-Assembly of Antimicrobial Peptide Nanonets for Trap-and-Kill of Antibiotic-Resistant Strains

Bacterial trapping using nanonets is a ubiquitous immune defense mechanism against infectious microbes. These nanonets can entrap microbial cells, effectively arresting their dissemination and rendering them more vulnerable to locally secreted microbicides. Inspired by this evolutionarily conserved anti-infective strategy, a series of 15 to 16 residue-long synthetic β-hairpin peptides is herein constructed with the ability to self-assemble into nanonets in response to the presence of bacteria, enabling spatiotemporal control over microbial killing. Using amyloid-specific K114 assay and confocal microscopy, the membrane components lipoteichoic acid and lipopolysaccharide are shown to play a major role in determining the amyloid-nucleating capacity as triggered by Gram-positive and Gram-negative bacteria respectively. These nanonets displayed both trapping and killing functionalities, hence offering a direct improvement from the trap-only biomimetics in literature. By substituting a single turn residue of the non-amyloidogenic BTT1 peptide, the nanonet-forming BTT1-3A analog is produced with comparable antimicrobial potency. With the same sequence manipulation approach, BTT2-4A analog modified from BTT2 peptide showed improved antimicrobial potency against colistin-resistant clinical isolates. The peptide nanonets also demonstrated robust stability against proteolytic degradation, and promising in vivo efficacy and biosafety profile. Overall, these bacteria-responsive peptide nanonets are promising clinical anti-infective alternatives for circumventing antibiotic resistance.     

The Electrochemical Response of Single Crystalline Copper Nanowires to Atmospheric Air and Aqueous Solution

In this paper, single crystalline copper nanowires (CuNWs) have been electrochemically grown through anodic aluminum oxide template. The environmental stability of the as‐obtained CuNWs in both 40% relative humidity (RH) atmosphere and 0.1 m NaOH aqueous solution has been subsequently studied. In 40% RH atmosphere, a uniform compact Cu₂O layer is formed as a function of exposure time following the logarithmic law and epitaxially covers the CuNW surfaces. It is also found that the oxide layers on CuNWs are sequentially grown when subjected to the cyclic voltammetry measurement in 0.1 m NaOH solution. An epitaxially homogeneous Cu₂O layer is initially formed over the surface of the CuNW substrates by solid‐state reaction (SSR). Subsequently, the conversion of Cu₂O into epitaxial CuO based on the SSR takes place with the increase of applied potential. This CuO layer is partially dissolved in the solution forming Cu(OH)₂, which then redeposited on the CuNW surfaces (i.e., dissolution‐redeposition (DR) process) giving rise to a mixed polycrystalline CuO/Cu(OH)₂ layer. The further increase of applied potential allows the complete oxidation of Cu₂O into CuO to form a dual‐layer structure (i.e., CuO inner layer and Cu(OH)₂ outer layer) with random orientations through an enhanced DR process.     

A magnetic bead-based DNA extraction and purification microfluidic device

This article introduces a novel magnetic bead-based DNA extraction and purification device using active magnetic mixing approach. Mixing and separation steps are performed using functionalised superparamagnetic beads suspended in cell lysis buffer in a circular chamber that is sandwiched between two external magnetic coils. Non-uniform nature of magnetic field causes temporal and spatial distribution of beads within the chamber. This process efficiently mixes the lysis buffer and whole blood in order to extract DNA from target cells. Functionalized surface of the magnetic beads then attract the exposed DNA molecules. Finally, DNA-attached magnetic beads are attracted to the bottom of the chamber by activating the bottom magnetic coil. DNA molecules are extracted from magnetic beads by washing and re-suspension processes. In this study, a circular PMMA microchamber, 25 μL in volume, 500 μm in depth and 8 mm in diameter was fabricated to purify DNA from spiked bacterial cell cultures into the whole blood sample using Promega Magazorb DNA extraction kit. The lysis efficiency was evaluated using a panel of Gram-positive (Bacillus subtilis) and Gram-negative (Escherichia coli) bacterial cells cultures into the blood sample to achieve approximately 100,000 copy levels inside the chip. Manufacturer’s standard extraction protocol was modified to a more simplified process suitable for chip-based extraction. The lysis step was performed using 5 min incubation at 56 °C followed by 5 min incubation at room temperature for binding process. Temperature rise was generated and maintained by the same external magnetic coils used for active mixing. The yield/purity and recovery levels of the extracted DNA were evaluated using quantitative UV spectrophotometer and real-time PCR assay, respectively. Real-time PCR results indicated efficient chip-based bacterial DNA extraction using modified extraction protocol comparable to the standard bench-top extraction process.