Crystal structure of the bacterial ribosomal decoding site complexed with a synthetic doubly functionalized paromomycin derivative: a new specific binding mode to an a-minor motif enhances in vitro antibacterial activity

The crystal structure of the complex between oligonucleotide containing the bacterial ribosomal decoding site (A site) and the synthetic paromomycin analogue 1, which contains the gamma-amino-alpha-hydroxybutyryl (L-haba) group at position N1 of ring II (2-DOS ring), and an ether chain with an O-phenethylaminoethyl group at position C2' of ring III, is reported. Interestingly, next to the paromomycin analogue 1 specifically bound to the A site, a second molecule of 1 with a different conformation is observed at the crystal packing interface which mimics the A-minor interaction between two bulged-out adenines from the A site and the codon-anticodon stem of the mRNA-tRNA complex. Improved antibacterial activity supports the conclusion that analogue 1 might affect protein synthesis on the ribosome in two different ways: 1) specific binding to the A site forces maintenance of the "on" state with two bulged out adenines, and 2) a new binding mode of 1 to an A-minor motif which stabilizes complex formation between the ribosome and the mRNA-tRNA complex regardless of whether the codon-anticodon stem is of the cognate or near-cognate type.     

Examples of successful architectural integration of PV: Japan

By the end of 2002 more than 1300 MWp of photovoltaic power was installed in industrialized countries worldwide. Of this, approximately 640 MWp, or 48%, is installed in Japan, mainly on buildings. This makes Japan the most prominent country in the field of building-integrated photovoltaics (BIPV). The interest in integration of PV among Japanese architects has increased accordingly, which has resulted in many sophisticated and innovative designs. This short communication introduces four examples of successful architectural integration from different fields. The Japanese government aims at an installed PV capacity of 4820 MWp in 2010. In parallel, the Japanese PV industry needs to develop into a strong sector which is able to operate without direct market support. The role of architects in this process should not only be to increase the volume of building integrated PV, but also to make comprehensive, integral designs, which include sunlight shading, thermal insulation, energy saving, passive use of solar energy, and obviously also photovoltaics. Furthermore, architects could make an important contribution to establishing a new, sustainable urban environment in which BIPV is used on a large scale as a distributed source of energy. This fits well within the new international effort in the framework of the International Energy Agency (IEA), Photovoltaic Power Systems (PVPS), Task 10. Copyright © 2004 John Wiley & Sons, Ltd.     

Microstructure and stress corrosion cracking of the fusion boundary region in an alloy 182-A533B low alloy steel dissimilar weld joint

Stress corrosion cracking (SCC) in the fusion boundary (FB) region of an Alloy 182-A533B low alloy steel (LAS) dissimilar weld joint in high temperature water doped with sulfate was studied following a microstructure characterization of the FB region. The microstructure characterization suggested the type-II and type-I boundaries in the dilution zone (DZ) adjacent to the FB had lower resistance to SCC growth than the FB. Crack propagating perpendicular to the FB in the DZ was observed to be blunted by pitting at the FB, followed by the reactivation from the pitting by localized oxidation along the grain boundary in LAS.     

Streptomyces aminopeptidase P: biochemical characterization and insight into the roles of its N-terminal domain

We purified and characterized the aminopeptidase P from Streptomyces costaricanus TH-4 (thAPP). This enzyme has a tetramer structure, a metal-ion preference toward Zn, broad substrate specificity and a narrow pH dependency for activity. The primary structure of thAPP, respectively, exhibits 91% and 65% identity with those of two other APPs-APP I and APP II-from Streptomyces lividans (slAPP I and slAPP II). We next overexpressed the genes encoding thAPP and slAPP II in Escherichia coli and characterized them. Two differences were apparent in their properties: slAPP II formed a dimer, whereas thAPP formed a tetramer; also, the alkaline side pKa for the catalytic action of slAPP II is higher than that of thAPP. Investigation using chimeras of both enzymes revealed that the N-terminal domain is associated with the determination of pKa values for catalytic action and quaternary structure.     

Calculation of effective delayed neutron fraction with Monte Carlo perturbation techniques

New methods are proposed to estimate the effective delayed neutron fraction β_eff in Monte Carlo calculations: the eigenvalue methods jointly used with the differential operator sampling and correlated sampling techniques. In particular, the eigenvalue method with the differential operator sampling technique has a distinct feature that it theoretically gives an exact β_eff value. To verify the proposed methods, Monte Carlo calculations are performed for several systems with simple geometry. It is found that the results obtained with the proposed methods agree with the reference deterministic results within sufficiently small statistical uncertainties. The indirect perturbed source effect must be taken into account to estimate an exact β_eff value.     

Effect of silicon content and carbon addition on primary recrystallization of Fe-3 pct si

A study was made on the effect of the increase of silicon content and the addition of carbon on the primary recrystallization of silicon steel sheet containing MnS and AlN as inhibitors. The increase of silicon content led to the reduction of the size of primary grains and the intensity of {110} that is considered to represent the amount of {110}〈001〉-oriented nuclei, to the gain of the size of precipitates, and to the coarse dispersion of the precipitates. The carbon addition promoted primary recrystallization and decreased the size of primary grains. From the points mentioned earlier, the increase of silicon content is considered disadvantageous, and the carbon addition is advantageous to the secondary recrystallization of the {110}〈001〉 texture.     

On a compound redundant system without repair

This paper deals with the reliability considerations on a redundant system consist of two subsystems connected in series, in which they have a similar warm-standby subsystem, respectively. And these four subsystems are composed of several identical units in parallel redundancy, respectively and are connected with switching devices each other.The purpose of this paper is to attain the following two subjects; (1) to utilize the surviving units at any switch-over point of time, as many as possible, making use of the switching devices as mensioned above, and (2) to deal with various complex redundant systems with or without switching devices, simultaneously.In these considerations we have obtained the reliability function and mean time to system failure (MTSF) of this system.     

Competitive interaction of polyanions and anionic dye with bovine serum albumin

The binding of anionic dye, p-(2-amino-6-sulfonyl-8-naphthylazo)benzene sulfonic acid disodium salt (ASANA) to bovine serum albumin (BSA) at pH 7.5 has been studied by spectrophotometric techniques. The values of the dissociation constants were obtained with the use of the Benesi-Hildebrand equation for ASANA. Competitive binding of polyanions, sodium poly(styrene sulfonate) (PSSNa), potassium poly(vinyl sulfonate) (PVSK), poly(acrylic acid) (PAA), and poly(methacrylic acid) (PMAA) and anionic dye to BSA was evaluated through the variations in the different spectra of BSA-dye-polymer systems.