Combining 1,3-Ditriazolylbenzene and Quinoline to Discover a New G-Quadruplex-Interactive Small Molecule Active against Cancer Stem-Like Cells

Quadruplex nucleic acids are promising targets for cancer therapy. In this study we used a fragment-based approach to create new flexible G-quadruplex (G4) DNA-interactive small molecules with good calculated oral drug-like properties, based on quinoline and triazole heterocycles. G4 melting temperature and polymerase chain reaction (PCR)-stop assays showed that two of these compounds are selective G4 ligands, as they were able to induce and stabilize G4s in a dose- and DNA sequence-dependent manner. Molecular docking studies have suggested plausible quadruplex binding to both the G-quartet and groove, with the quinoline module playing the major role. Compounds were screened for cytotoxicity against four cancer cell lines, where 4,4′-(4,4′-(1,3-phenylene)bis(1H-1,2,3-triazole-4,1-diyl))bis(1-methylquinolin-1-ium) ( 1 d ) showed the greater activity. Importantly, dose–response curves show that 1 d is cytotoxic in the human colon cancer HT-29 cell line enriched in cancer stem-like cells, a subpopulation of cells implicated in chemoresistance. Overall, this study identified a new small molecule as a promising lead for the development of drugs targeting G4 in cancer stem cells.     

Coating carbon nanotubes with a polystyrene-based polymer protects against pulmonary toxicity

Background  

carbon nanotubes (CNT) can have adverse effects on health. Therefore, minimizing the risk associated with CNT exposure is of crucial importance. The aim of this work was to evaluate if coating multi-walled CNT (MWCNT) with polymers could modify their toxicity, thus representing a useful strategy to decrease adverse health effects of CNT. We used industrially-produced MWCNT uncoated (NT1) or coated (50/50 wt%) with acid-based (NT2) or polystyrene-based (NT3) polymer, and exposed murine macrophages (RAW 264.7 cell line) or Balb/c mice by intratracheal administration. Biological experiments were performed both in vitro and in vivo, examining time- and dose-dependent effects of CNT, in terms of cytotoxicity, expression of genes and proteins related to oxidative stress, inflammation and tissue remodeling, cell and lung tissue morphology (optical and transmission electron microscopy), and bronchoalveolar lavage fluid content analysis.     

A Mitochondrial Membrane Exopolyphosphatase Is Modulated by, and Plays a Role in, the Energy Metabolism of Hard Tick Rhipicephalus (Boophilus) microplus Embryos

The physiological roles of polyphosphates (polyP) recently found in arthropod mitochondria remain obscure. Here, the relationship between the mitochondrial membrane exopolyphosphatase (PPX) and the energy metabolism of hard tick Rhipicephalus microplus embryos are investigated. Mitochondrial respiration was activated by adenosine diphosphate using polyP as the only source of inorganic phosphate (P(i)) and this activation was much greater using polyP(3) than polyP(15). After mitochondrial subfractionation, most of the PPX activity was recovered in the membrane fraction and its kinetic analysis revealed that the affinity for polyP(3) was 10 times stronger than that for polyP(15). Membrane PPX activity was also increased in the presence of the respiratory substrate pyruvic acid and after addition of the protonophore carbonyl cyanide-p-trifluoromethoxyphenylhydrazone. Furthermore, these stimulatory effects disappeared upon addition of the cytochrome oxidase inhibitor potassium cyanide and the activity was completely inhibited by 20 μg/mL heparin. The activity was either increased or decreased by 50% upon addition of dithiothreitol or hydrogen peroxide, respectively, suggesting redox regulation. These results indicate a PPX activity that is regulated during mitochondrial respiration and that plays a role in adenosine-5'-triphosphate synthesis in hard tick embryos.     

Optimal design for sustainable bioethanol supply chain considering detailed plant performance model

The always increasing energy demand combined with the declining availability of fossil fuels is driving forces for the investigation of renewable energy sources. In this context, bioethanol is considered as one of the most appropriate solutions for short term gasoline substitution. Then, the motivation of this work is to propose a MINLP optimization model for a sustainable design and behavior analysis of sugar/ethanol supply chain (SC). A detailed model for ethanol plant design is embedded in the SC model, and therefore plant and SC designs are simultaneously obtained. Yeast production and residue recycles are taken into account in order to assess the environmental impact. The inclusion of sustainability issues in the model produces both economic and operative changes in SC and plant designs. The simultaneous optimization of these elements allows the evaluation of several compromises among design and process variables. These issues are highlighted throughout the evaluated studied cases.     

Behavioral and Chemical Investigations of Contact Kairomones Released by the Mud Dauber Wasp <Emphasis Type="Italic">Trypoxylon politum</Emphasis>, a Host of the Parasitoid <Emphasis Type="Italic">Melittobia digitata</Emphasis>

Contact kairomones from the host mud dauber wasp Trypoxylon politum Say (Hymenoptera: Crabronidae) that mediate behavioral responses of its ectoparasitoid Melittobia digitata Dahms (Hymenoptera: Eulophidae) were investigated. Chemical residues from host by-products, the cocoon, and the meconium, induced arrestment behavior of macropterous female parasitoids, while those from the host stage attacked, i.e., the prepupa, did not. Melittobia digitata response to polar and apolar extracts of host by-products indicated kairomone(s) solubility mainly in hexane. GC and GC/MS analysis of cocoon and meconium apolar extracts revealed a mixture of linear carboxylic acids from C₆ to C₁₈, and both extracts contained almost identical compounds. When a reconstructed blend of host by-product carboxylic acids was tested, M. digitata females showed only a weak response, thus suggesting that other unidentified compounds present in small quantities also may be involved. Melittobia digitata’s response to contact kairomones was innate and not affected by previous host exposure experience. Our results provide evidence of contact kairomone exploitation in the genus Melittobia. The ecological significance of these findings in the host selection process of M. digitata is discussed.     

Determining the residual alcohol in biodiesel through its flash point

A simple low cost method is proposed for the quantitative analysis of residual alcohol in biodiesel through determination of the flash point, with which it is correlated. Methyl ester biodiesels from vegetable oils such as corn, soy and sunflower were prepared. The ethyl ester was obtained from soy oil and methyl biodiesel was also synthesized from bovine fat. In all cases it became very evident that there is a direct correlation between the flash point and the residual alcohol content in the prepared biodiesel. Therefore this parameter can be used to directly determine the residual alcohol content of the product.     

Oxygen migration on the graphene surface. 2. Thermochemistry of basal-plane diffusion (hopping)

Thermodynamic affinities, activation energies and diffusion coefficients for oxygen mobility on the graphene surface are calculated using density functional theory (DFT). We report and discuss the effects of geometry, charge distribution and heteroatom substitution on the migration of epoxy oxygen on the basal plane: both the driving force and the ease of surface hopping are very sensitive to their variations. A significant decrease in the hopping energy barrier is observed when graphene contains free edge sites and oxygen functionalities, as well as upon an increase in electron density; conversely, the barrier increases as a consequence of electron removal, and the propensity for graphene ‘unzipping’ also increases. There is a correlation between the hopping barrier and the C–O bond strength of the leaving epoxide group. Under the most favorable conditions investigated, oxygen mobility is quite high, of the same order as that of gas-phase O₂ in micropores (ca. 10⁻⁹ m²/s). This is consistent with the increasingly acknowledged role of basal-plane oxygen as a protagonist (e.g., reaction intermediate), instead of a spectator, in the wide variety of adsorption and reaction processes involving sp²-hybridized carbon materials.     

Antioxidant activity of pine bark procyanidins in bulk corn oil and corn oil‐in‐water emulsions

In this work, the ability of pine bark procyanidins to hinder oxidation in bulk corn oil and corn oil‐in‐water‐emulsion has been investigated. A preliminary characterisation of the obtained aqueous (AF) and organic (OW) fractions and subfractions suggested a very polar character and showed that both fractions possess remarkable antioxidant activity when minimum concentrations of 2 mg/mL are used. OW fractions and subfractions derived from both pine varieties were able to inhibit oxidation in oils. More specifically, two organic subfractions were the most efficient for retarding the degradation process, with levels of 62% and 50% after 8 days of treatment, respectively. Organic subfractions obtained from both varieties of pine also rendered possible inhibition levels in oil‐in‐water‐emulsions up to 80% after 4 days of oxidation, more than 3 times higher than the levels provided by tocopherol, a well‐known model commercial antioxidant, which confirms the excellent antioxidant potential of procyanidins from pine bark. Practical application: Lipid deterioration leads to losses in quality and nutritional value and to the development of off‐flavours in many foodstuffs. One way to overcome this drawback is by using antioxidants of natural origin, which is a subject of a great scientific and industrial interest, reflected by the growing number of papers and patents published during the last years. Since aqueous and organic fractions obtained from Pinus pinaster and Pinus radiata bark turned out to be an adequate source of procyanidins in previous investigations of our group, their possible antioxidant role in model lipid systems was investigated. This approach entails also another benefit in terms of waste valorisation, since pine bark is a typical residue of agroforestal industries.     

Current advances in the non‐chromatographic fractionation and characterization of PEGylated proteins

For more than 30 years, PEGylation has been used to improve the physicochemical properties of several proteins and therapeutic drugs having a major impact in the biopharmaceutical industry. The purification of PEGylated proteins usually involves two basic challenges: (1) the separation of PEG‐proteins from other reaction products; and (2) the sub‐fractionation of PEG‐proteins on the basis of their degree of PEGylation and positional isomerism. Currently, most PEGylated protein purification processes are based on chromatographic techniques, especially size exclusion chromatography (SEC) and ion exchange chromatography (IEX). Nonetheless, other less frequently used strategies based on non‐chromatographic techniques such as ultrafiltration, electrophoresis, capillary electrophoresis, and aqueous two‐phase systems have been developed in order to fractionate and analyze PEGylated derivates. This review presents current advances in some of the most widely used non‐chromatographic strategies for the fractionation and analysis of PEG‐protein conjugates. Copyright © 2010 Society of Chemical Industry