Nitrobacter and Nitrospira genera as representatives of nitrite-oxidizing bacteria: detection, quantification and growth along the lower Seine River (France)

Pollution from agriculture and urban effluents influences the ecology and biochemical functioning of the Seine River. Nitrification dominates nitrogen transformations downstream of the effluents of the Paris wastewater treatment plant (WWTP) at Achères, treating, by activated sludge the wastewater of 6.5 million inhabitant equivalents from Paris and its suburbs, without nitrification and denitrification treatment. It discharges effluents containing large amounts of nitrogen, ammonium mostly (30 mg L⁻¹ N-NH₄⁺ L⁻¹), on average 45 mg L⁻¹ of suspended particulate matter, high quantities of total organic carbon (30 mg C L⁻¹) largely biodegradable (40%), and high concentration in total phosphorus (3 mg Tot P L⁻¹), as well as microorganisms. Ammonium, brought into the river system, is slowly nitrified in the lower Seine River and especially in the freshwater estuary. The nitrifying activities can be observed by measuring inorganic nitrogen compound concentrations and potential activities. To understand the contributions of the WWTP effluents, the upstream agricultural runoff water and the Seine tributaries, it is useful to investigate the bacterial community. Whereas ammonia oxidation has been widely studied, the second step, i.e. nitrite oxidation, is less well understood. We have previously analysed the ammonium-oxidizing bacterial (AOB) community in the Seine (Cébron, A., Berthe, T., Garnier, J., 2003. Nitrification and nitrifying bacteria in the lower Seine River and estuary (France). Appl. Environ. Microbiol. 69, 7091–7100; Cébron, A., Coci, M., Garnier, J., Laanbroek, H.J., 2004. DGGE analysis of the ammonia oxidizing bacterial community structure in the lower Seine River: impact of the Paris wastewater effluents. Appl. Environ. Microbiol. 70, 6726–6737), and focus here on the composition of the nitrite-oxidizing bacterial (NOB) community. As no general molecular probe targeting all known NOBs is currently available, we chose to target and quantify (by competitive PCR) the two genera Nitrobacter and Nitrospira assumed to be the major players in nitrite oxidation in freshwater environments. Nitrobacter species were dominant in the upstream Seine River basin but Nitrospira was the dominant NOB downstream of the WWTP. These two genera were equally represented in WWTP effluents. In the Seine River estuary, especially in the salinity gradient, the Nitrobacter proportion increases and that of Nitrospira disappears, possibly due dilution by seawater.     

Cost assessment and ecological effectiveness of nutrient reduction options for mitigating Phaeocystis colony blooms in the Southern North Sea: an integrated modeling approach

Nutrient reduction measures have been already taken by wealthier countries to decrease nutrient loads to coastal waters, in most cases however, prior to having properly assessed their ecological effectiveness and their economic costs. In this paper we describe an original integrated impact assessment methodology to estimate the direct cost and the ecological performance of realistic nutrient reduction options to be applied in the Southern North Sea watershed to decrease eutrophication, visible as Phaeocystis blooms and foam deposits on the beaches. The mathematical tool couples the idealized biogeochemical GIS-based model of the river system (SENEQUE-RIVERSTRAHLER) implemented in the Eastern Channel/Southern North Sea watershed to the biogeochemical MIRO model describing Phaeocystis blooms in the marine domain. Model simulations explore how nutrient reduction options regarding diffuse and/or point sources in the watershed would affect the Phaeocystis colony spreading in the coastal area. The reference and prospective simulations are performed for the year 2000 characterized by mean meteorological conditions, and nutrient reduction scenarios include and compare upgrading of wastewater treatment plants and changes in agricultural practices including an idealized shift towards organic farming. A direct cost assessment is performed for each realistic nutrient reduction scenario. Further the reduction obtained for Phaeocystis blooms is assessed by comparison with ecological indicators (bloom magnitude and duration) and the cost for reducing foam events on the beaches is estimated. Uncertainty brought by the added effect of meteorological conditions (rainfall) on coastal eutrophication is discussed. It is concluded that the reduction obtained by implementing realistic environmental measures on the short-term is costly and insufficient to restore well-balanced nutrient conditions in the coastal area while the replacement of conventional agriculture by organic farming might be an option to consider in the nearby future.     

Potential of denitrification and nitrous oxide production from agricultural soil profiles (Seine Basin,France)

The denitrification process and the associated nitrous oxide (N₂O) production in soils have been poorly documented, especially in terms of soil profiles; most work on denitrification has concentrated on the upper layer (first 20 cm). The objectives of this study were to examine the origin of N₂O emission and the effects of in situ controlling factors on soil denitrification and N₂O production, also allowing the (N₂O production)/(NO₃ ⁻–N reduction) ratio to be determined through (1) the position on a slope reaching a river and (2) the depth (soil horizons: 10–30 and 90–110 cm). In 2009 and 2010, slurry batch experiments combined with molecular investigations of bacterial communities were conducted in a corn field and an adjacent riparian buffer strip. Denitrification rates, ranging from 0.30 μg NO₃ ⁻–N g⁻¹ dry soil h⁻¹ to 1.44 μg NO₃ ⁻–N g⁻¹ dry soil h⁻¹, showed no significant variation along the slope and depth. N₂O production assessed simultaneously differed considerably over the depth and ranged from 0.4 ng N₂O–N g⁻¹ dry soil h⁻¹ in subsoils (the 90–110-cm layer) to 155.1 ng N₂O–N g⁻¹ dry soil h⁻¹ in the topsoils (the 10–30-cm layer). In the topsoils, N₂O–N production accounted for 8.5–48.0% of the total denitrified NO₃ ⁻–N, but for less than 1% in the subsoils. Similarly, N₂O-consuming bacterial communities from the subsoils greatly differed from those of the topsoils, as revealed by their nosZ DGGE fingerprints. High N₂O-SPPR (nitrous oxide semi potential production rates) in comparison to NO₃-SPDR (nitrate semi potential reduction rates) for the topsoils indicated significant potential greenhouse N₂O gas production, whereas lower horizons could play a role in fully removing nitrate into inert atmospheric N₂. In terms of landscape management, these results call for caution in rehabilitating or constructing buffer zones for agricultural nitrate removal.     

Antioxidative activities of tocotrienols on phospholipid liposomes

Antioxidative activity of tocotrienol (Toc3) was studied in the oxidation of dilinoleoylphosphatidylcholine (DLPC) liposomes. The objective was to measure the differences in the antioxidative activities betweenα-Toc3 andα-tocopherol (α-Toc), and betweenγ-Toc3 andγ-Toc. When each antioxidant was added to the already prepared DLPC liposome solution, the antioxidative activity of Toc3 was larger than that of Toc. However, when incorporated into the liposomal membrane, the antioxidative activities of Toc3 and Toc were the same and were intermediate between those of the added Toc3 and Toc. When added to the liposome solution, the consumption of Toc3 during the induction period was larger than that of Toc. When incorporated into the liposomal membrane, the consumptions of Toc3 and Toc were the same and were intermediate between those of the added Toc3 and Toc. These results suggest that the reactions of Toc3 and Toc with phospholipid peroxide within the membrane are inhibited to a different degree depending on the dosing manner of Toc3 and Toc. Namely, the degree of inhibition decreases in the following order: Toc(added)> Toc(incorporated)= Toc3(incorporated)> Toc3(added).     

Role of Iron in Mullite Formation from Kaolins by Mössbauer Spectroscopy and Rietveld Refinement

This paper examines the role of iron in mullite nucleation and growth from kaolins. We chose two typical raw kaolins containing a reduced impurity level and characterized by very different degrees of crystallinity of the kaolinite phase. Both the structural iron in kaolinite and also some iron deposited onto phyllosilicate layers by a chemical route were considered. After firing in the 900–1100°C temperature range, the Fe environment was determined by Mössbauer spectroscopy. From X-ray spectra of samples fired at 1250°C, mullite stoichiometries were obtained by Rietveld refinements. It was shown that iron contributes to the structural reorganization stage of the material, when mullite is nucleated. Fe atoms are essentially in octahedral sites, which favors an increase of the c parameter of the orthorhombic cell. The iron quantity attains a saturation level for an Fe-to-Al ratio between 0.3 and 0.4, depending on the raw kaolinite crystallinity. Besides mullite, the excess iron associates with titanium to form a pseudobrookite phase and hematite.     

New developments in phospholipase A<Subscript>2</Subscript>

Some of the most recent data concerning various phospholipases A₂, with special emphasis on secretory, cytosolic, and calcium-independent phospholipases A₂ are summarized. Besides their contribution to the production of proinflammatory lipid mediators, the involvement of these enzymes in key cell responses such as apoptosis or tumor cell metastatic potential is also discussed, taking advantage of transgenic models based on gene invalidation by homologous recombination. The possible role of secretory and cytosolic platelet-activating factor acetyl hydrolases is also briefly mentioned. Finally, the ectopic expression in epididymis of an intestinal phospholipase B opens some novel issues as to the possible function of phospholipases in reproduction.     

Impetigo in French Guyana. A clinical, bacteriological, toxicological and sensitivity to antibiotics study]

Acromegalic patients present an increase of osteoblastic and osteoclastic activity, showing a different effect on the axial and appendicular skeletal structures. At this regard controversial data about bone mineral density (BMD) have been published in literature. In fact an increase of BMD levels in femoral neck and Ward's triangle without any difference in lumbar spine has been described. On the other hand normal BMD levels at forearm and reduced BMD levels at lumbar spine were found. These patients seem to have a reduction of trabecular BMD similar to postmenopausal osteoporotic patients despite normal or slightly elevated cortical BMD. Recently, it has been described that cytokines, in particular tumor necrosis factor-alpha (TNF-alpha) and interleukin-1 (IL-1), are implicated in the pathogenetic mechanism of postmenopausal osteoporosis. Taking into account that growth hormone (GH) can increase TNF-alpha and IL-1 secretion by mononuclear blood cells, the evaluation of possible relationship between the reduced BMD at lumbar spine and circulating cytokines levels was carried out in acromegalic patients. In addition we evaluated the effect of acute octreotide administration on serum TNF-alpha and IL-I concentrations. Eleven patients with active acromegaly and eleven healthy age-, sex-, weight- and heightmatched subjects were enrolled in this study. BMD was significantly reduced at lumbar spine (0.80 +/- 0.29 g/cm2 vs 1.02 +/- 0.11 g/cm2; p < 0.01), but not at femoral neck level or at Ward's triangle level (0.92 + 0.15 g/cm2 vs 0.97 + 0.11 g/cm2, p = NS; and 0.74 +/- 0.16 g/cm2 vs 0.85 +/- 0.1 g/cm2, p = NS) when compared to controls. Baseline serum levels of TNF-alpha and IL-1 were in the normal range both in patients and controls. After acute octreotide administration, no differences in circulating TNF-alpha and IL-1 levels were found. In conclusion, acromegalic patients present a reduced BMD at lumbar spine but not at femoral neck level and Ward's triangle. Circulating cytokines such as TNF-alpha and IL-1 are in the normal range. These data suggest that cytokines are not involved in the pathogenesis of GH-excess induced osteoporosis. The possibility that the GH excess might affect bone turnover inducing an increase of cytokines acting by a paracrine/autocrine mechanism cannot be ruled out.