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991.
Dr. Aline Telzerow Dr. Juraj Paris Dr. Maria Håkansson Dr. Javier González-Sabín Dr. Nicolas Ríos-Lombardía Prof. Dr. Harald Gröger Dr. Francisco Morís Dr. Martin Schürmann Prof. Dr. Helmut Schwab Dr. Kerstin Steiner 《Chembiochem : a European journal of chemical biology》2021,22(7):1232-1242
Amine transaminases (ATAs) are used to synthesize enantiomerically pure amines, which are building blocks for pharmaceuticals and agrochemicals. R-selective ATAs belong to the fold type IV PLP-dependent enzymes, and different sequence-, structure- and substrate scope-based features have been identified in the past decade. However, our knowledge is still restricted due to the limited number of characterized (R)-ATAs, with additional bias towards fungal origin. We aimed to expand the toolbox of (R)-ATAs and contribute to the understanding of this enzyme subfamily. We identified and characterized four new (R)-ATAs. The ATA from Exophiala sideris contains a motif characteristic for d -ATAs, which was previously believed to be a disqualifying factor for (R)-ATA activity. The crystal structure of the ATA from Shinella is the first from a Gram-negative bacterium. The ATAs from Pseudonocardia acaciae and Tetrasphaera japonica are the first characterized (R)-ATAs with a shortened/missing N-terminal helix. The active-site charges vary significantly between the new and known ATAs, correlating with their diverging substrate scope. 相似文献
992.
Carina A. Lämmle Adam Varady Thorsten G. Müller Dr. Caterina Sturtzel Michael Riepl Bettina Mathes Jenny Eichhorst Dr. Anje Sporbert Dr. Martin Lehmann Prof. Dr. Hans-Georg Kräusslich Dr. Martin Distel Dr. Johannes Broichhagen 《Chembiochem : a European journal of chemical biology》2021,22(3):548-556
Selective targeting of DNA by means of fluorescent labeling has become a mainstay in the life sciences. While genetic engineering serves as a powerful technique and allows the visualization of nucleic acid by using DNA-targeting fluorescent fusion proteins in a cell-type- and subcellular-specific manner, it relies on the introduction of foreign genes. On the other hand, DNA-binding small fluorescent molecules can be used without genetic engineering, but they are not spatially restricted. Herein, we report a photocaged version of the DNA dye Hoechst33342 (pcHoechst), which can be uncaged by using UV to blue light for the selective staining of chromosomal DNA in subnuclear regions of live cells. Expanding its application to a vertebrate model organism, we demonstrate uncaging in epithelial cells and short-term cell tracking in vivo in zebrafish. We envision pcHoechst as a valuable tool for targeting and interrogating DNA with precise spatiotemporal resolution in living cells and wild-type organisms. 相似文献
993.
Dr. Julian D. Hegemann Prof. Dr. Roderich D. Süssmuth 《Chembiochem : a European journal of chemical biology》2021,22(22):3169-3172
Lanthipeptides belong to the family of ribosomally synthesized and post-translationally modified peptides (RiPPs) and are subdivided into different classes based on their processing enzymes. The three-domain class IV lanthipeptide synthetases (LanL enzymes) consist of N-terminal lyase, central kinase, and C-terminal cyclase domains. While the catalytic residues of the kinase domains (mediating ATP-dependent Ser/Thr phosphorylations) and the lyase domains (carrying out subsequent phosphoserine/phosphothreonine (pSer/pThr) eliminations to yield dehydroalanine/dehydrobutyrine (Dha/Dhb) residues) have been characterized previously, such studies are missing for LanL cyclase domains. To close this gap of knowledge, this study reports on the identification and validation of the catalytic residues in the cyclase domain of the class IV lanthipeptide synthetase SgbL, which facilitate the nucleophilic attacks by Cys thiols on Dha/Dhb residues for the formation of β-thioether crosslinks. 相似文献
994.
Paula Bracco Hein J. Wijma Bastian Nicolai Jhon Alexander Rodriguez Buitrago Thomas Klünemann Agustina Vila Patrick Schrepfer Wulf Blankenfeldt Dick B. Janssen Prof. Dr. Anett Schallmey 《Chembiochem : a European journal of chemical biology》2021,22(6):1099-1110
CYP154C5 from Nocardia farcinica is a P450 monooxygenase able to hydroxylate a range of steroids with high regio- and stereoselectivity at the 16α-position. Using protein engineering and substrate modifications based on the crystal structure of CYP154C5, an altered regioselectivity of the enzyme in steroid hydroxylation had been achieved. Thus, conversion of progesterone by mutant CYP154C5 F92A resulted in formation of the corresponding 21-hydroxylated product 11-deoxycorticosterone in addition to 16α-hydroxylation. Using MD simulation, this altered regioselectivity appeared to result from an alternative binding mode of the steroid in the active site of mutant F92A. MD simulation further suggested that the entrance of water to the active site caused higher uncoupling in this mutant. Moreover, exclusive 15α-hydroxylation was observed for wild-type CYP154C5 in the conversion of 5α-androstan-3-one, lacking an oxy-functional group at C17. Overall, our data give valuable insight into the structure–function relationship of this cytochrome P450 monooxygenase for steroid hydroxylation. 相似文献
995.
Dr. Jelena Melesina Conrad V. Simoben Lucas Praetorius Emre F. Bülbül Dr. Dina Robaa Prof. Dr. Wolfgang Sippl 《ChemMedChem》2021,16(9):1336-1359
This review classifies drug-design strategies successfully implemented in the development of histone deacetylase (HDAC) inhibitors, which have many applications including cancer treatment. Our focus is on especially demanded selective HDAC inhibitors and their structure-activity relationships in relation to corresponding protein structures. The main part of the paper is divided into six subsections each narrating how optimization of one of six structural features can influence inhibitor selectivity. It starts with the impact of the zinc binding group on selectivity, continues with the optimization of the linker placed in the substrate binding tunnel as well as the adjustment of the cap group interacting with the surface of the protein, and ends with the addition of groups targeting class-specific sub-pockets: the side-pocket-, lower-pocket- and foot-pocket-targeting groups. The review is rounded off with a conclusion and an outlook on the future of HDAC inhibitor design. 相似文献
996.
Dr. Ana G. Enderle Dr. Matteo Bosso Rüdiger Groß Magdalena Heiland Dr. Mariela Bollini Dr. María J. Culzoni Prof. Dr. Frank Kirchhoff Prof. Dr. Jan Münch Prof. Dr. Carsten Streb 《ChemMedChem》2021,16(17):2727-2730
Polyoxometalates (POMs), molecular metal oxide anions, are inorganic clusters with promising antiviral activity. Herein we report increased anti-HIV-1 activity of a POM when electrostatically combined with organic counter-cations. To this end, Keggin-type cerium tungstate POMs have been combined with organic methyl-caffeinium (Caf) cations, and their cytotoxicity, antiviral activity and mode of action have been studied. The novel compound, Caf4K[β2-CeSiW11O39]×H2O, exhibits sub-nanomolar antiviral activity and inhibits HIV-1 infectivity by acting on an early step of the viral infection cycle. This work demonstrates that combination of POM anions and organic bioactive cations can be a powerful new strategy to increase antiviral activity of these inorganic compounds. 相似文献
997.
Dr. Walter D. Guerra Dr. Daniel Lucena-Agell Rafael Hortigüela Prof. Roberto A. Rossi Dr. J. Fernando Díaz Prof. José M. Padrón Dr. Silvia M. Barolo 《ChemMedChem》2021,16(19):3003-3016
We prepared a series of free NH and N-substituted dibenzonthiazines with potential anti-tumor activity from N-aryl-benzenesulfonamides. A biological test of synthesized compounds (59 samples) was performed in vitro measuring their antiproliferative activity against a panel of six human solid tumor cell lines and its tubulin inhibitory activity. We identified 6-(phenylsulfonyl)-6H-dibenzo[c,e][1,2]thiazine 5,5-dioxide and 6-tosyl-6H-dibenzo[c,e][1,2]thiazine 5,5-dioxide as the best compounds with promising values of activity (overall range of 2–5.4 μM). Herein, we report the dibenzothiazine core as a novel building block with antiproliferative activity, targeting tubulin dynamics. 相似文献
998.
The effect of adding 330–4930 ppm hydrogen to a reaction mixture of NO and CO (2000 ppm each) over platinum and rhodium catalysts has been investigated at temperatures around 200–250°C. Hydrogen causes large increases in the conversion of NO and, surprisingly, also of CO. Oxygen atoms from the additional NO converted are eventually combined with CO to give CO2 rather than react with hydrogen to form water. This reaction is described by CO + NO +3/2H2 CO2 + NH3 and accounts for 50–100% of the CO2 formed with Pt/Al2O3 and 20–50% with Rh/Al2O3. With the latter catalyst a substantial amount of NO converted produces nitrous oxide. Comparison with a known study of unsupported noble metals suggests that isocyanic acid (HNCO) might be an important intermediate in a reaction system with NO, CO and H2 present. 相似文献
999.
Bruce A. Schulte Dietland Müller-Schwarze Rong Tang Francis X. Webster 《Journal of chemical ecology》1995,21(7):941-957
North American beaver (Castor canadensis) were observed to sniff from the water and make land visits to some synthetic chemical components of castoreum placed on experimental scent mounds (ESM). In previous analysis, the elicitation (presence/absence), completeness, and/or strength (number, duration) of these key responses served as separate measures of biological activity. In this paper, we used principal components analysis (PCA) to combine linearly six related measures of observed response and one index of overnight visitation calculated over all trials. The first principal component accounted for a majority of the variation and allowed ranking of the samples based on their composite bioactivity. A second PCA, based only on response trials (excluding trials with no responses), showed that responses to the synthetic samples, once elicited, did not vary greatly in completeness or strength. None of the samples evoked responses as complete or strong as the castoreum control. Castoreum also elicited more multiple land visits (repeated visits to the ESM by the same individual or by more than one family member) than the synthetic samples, indicating that an understanding of the castoreum chemosignal requires consideration of responses by the family unit, and not just the land visit by the initial responder. 相似文献
1000.
Werner Krauss Denis Schütz Franz Andreas Mautner Antonio Feteira Klaus Reichmann 《Journal of the European Ceramic Society》2010,30(8):1827-1832
The phase diagram of (1 ? x)(Bi0.5Na0.5)TiO3–xSrTiO3 was completed and investigations on polarization and strain in this system were carried out. (1 ? x)(Bi0.5Na0.5)TiO3–xSrTiO3-ceramics were prepared by conventional mixed oxide processing. The depolarization temperature (Td), the temperature of the rhombohedral–tetragonal phase transition (Tr–t) and the Curie temperature (Tm) were determined by measuring the temperature dependence of the relative permittivity. All solid solutions of (1 ? x)(Bi0.5Na0.5)TiO3–xSrTiO3 show relaxor behavior (A-site relaxor). From XRD-measurements a broad maximum of the lattice parameter can be observed around x = 0.5 but no structural evidence for a morphotropic phase boundary was found. SEM-analysis revealed a decrease of the grain size for increasing SrTiO3-content. At room temperature a maximum of strain of about 0.29% was found at x = 0.25 which coincides with a transition from a ferroelectric to an antiferroelectric phase. The temperature dependence of the displacement indicates an additional contribution from a structural transition (rhombohedral–tetragonal), which would be of certain relevance for the existence of a morphotropic phase boundary. 相似文献